Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0004_L03
         (324 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY118371-1|AAM48400.1|  676|Drosophila melanogaster RE13854p pro...    30   0.79 
AE014298-2438|AAF48635.1|  676|Drosophila melanogaster CG4521-PA...    30   0.79 
BT010115-1|AAQ22584.1| 1664|Drosophila melanogaster GH01331p pro...    29   1.8  
AE014297-4777|AAN14280.1| 1664|Drosophila melanogaster CG1815-PC...    29   1.8  
AE014297-4776|AAF57177.2| 1674|Drosophila melanogaster CG1815-PA...    29   1.8  
BT023552-1|AAY84952.1|  317|Drosophila melanogaster IP09780p pro...    28   3.2  
BT011008-1|AAR27879.1|  706|Drosophila melanogaster AT12204p pro...    28   3.2  
AE014298-1732|AAF48124.1|  706|Drosophila melanogaster CG18130-P...    28   3.2  
AE014297-600|AAF54028.2|  269|Drosophila melanogaster CG31496-PA...    28   3.2  
D43795-1|BAA07853.1|  519|Drosophila melanogaster CP-1 protein.        27   5.6  
AY119197-1|AAM51057.1|  189|Drosophila melanogaster SD12705p pro...    27   5.6  
AY069255-1|AAL39400.1|  966|Drosophila melanogaster GM03058p pro...    27   5.6  
AF188718-1|AAF05593.1|  966|Drosophila melanogaster alanyl-tRNA ...    27   5.6  
AE014134-1481|AAS64737.1|  966|Drosophila melanogaster CG13391-P...    27   5.6  
AE014134-1480|AAF52657.1|  966|Drosophila melanogaster CG13391-P...    27   5.6  
AF121361-3|AAD37505.1|  277|Drosophila melanogaster zinc finger ...    27   7.3  
AF121360-1|AAD34351.1|  277|Drosophila melanogaster DNZDHHC/NEW1...    27   7.3  
BT001688-1|AAN71443.1|  235|Drosophila melanogaster RE58281p pro...    26   9.7  
AY128487-1|AAM75080.1|  170|Drosophila melanogaster RE73921p pro...    26   9.7  
AY122259-1|AAM52771.1| 2176|Drosophila melanogaster SD09011p pro...    26   9.7  
AL009192-2|CAA15686.1| 2342|Drosophila melanogaster EG:133E12.4 ...    26   9.7  
AE014298-2527|AAF48701.1|  170|Drosophila melanogaster CG5010-PA...    26   9.7  
AE014298-308|AAF45704.2| 2301|Drosophila melanogaster CG4399-PB ...    26   9.7  

>AY118371-1|AAM48400.1|  676|Drosophila melanogaster RE13854p
           protein.
          Length = 676

 Score = 29.9 bits (64), Expect = 0.79
 Identities = 14/26 (53%), Positives = 18/26 (69%), Gaps = 1/26 (3%)
 Frame = +3

Query: 87  ATHVKARAAEERLPA-GPIAPVAPTV 161
           ATH+ +  AE+ +P   PIAPVAP V
Sbjct: 645 ATHMPSNPAEDEVPEKAPIAPVAPIV 670


>AE014298-2438|AAF48635.1|  676|Drosophila melanogaster CG4521-PA
           protein.
          Length = 676

 Score = 29.9 bits (64), Expect = 0.79
 Identities = 14/26 (53%), Positives = 18/26 (69%), Gaps = 1/26 (3%)
 Frame = +3

Query: 87  ATHVKARAAEERLPA-GPIAPVAPTV 161
           ATH+ +  AE+ +P   PIAPVAP V
Sbjct: 645 ATHMPSNPAEDEVPEKAPIAPVAPIV 670


>BT010115-1|AAQ22584.1| 1664|Drosophila melanogaster GH01331p protein.
          Length = 1664

 Score = 28.7 bits (61), Expect = 1.8
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = +3

Query: 66   PPPCLRRATHVKARAAEERLPAGPIAPVAP 155
            PPP  + A+H++ R   +R+P  P A   P
Sbjct: 1105 PPPKGKSASHLQFRGKNDRIPTSPPATAPP 1134


>AE014297-4777|AAN14280.1| 1664|Drosophila melanogaster CG1815-PC,
            isoform C protein.
          Length = 1664

 Score = 28.7 bits (61), Expect = 1.8
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = +3

Query: 66   PPPCLRRATHVKARAAEERLPAGPIAPVAP 155
            PPP  + A+H++ R   +R+P  P A   P
Sbjct: 1105 PPPKGKSASHLQFRGKNDRIPTSPPATAPP 1134


>AE014297-4776|AAF57177.2| 1674|Drosophila melanogaster CG1815-PA,
            isoform A protein.
          Length = 1674

 Score = 28.7 bits (61), Expect = 1.8
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = +3

Query: 66   PPPCLRRATHVKARAAEERLPAGPIAPVAP 155
            PPP  + A+H++ R   +R+P  P A   P
Sbjct: 1115 PPPKGKSASHLQFRGKNDRIPTSPPATAPP 1144


>BT023552-1|AAY84952.1|  317|Drosophila melanogaster IP09780p
           protein.
          Length = 317

 Score = 27.9 bits (59), Expect = 3.2
 Identities = 13/34 (38%), Positives = 15/34 (44%)
 Frame = +3

Query: 66  PPPCLRRATHVKARAAEERLPAGPIAPVAPTVPV 167
           P P     +   A A     PA P+AP AP  PV
Sbjct: 186 PSPVFPAVSPAAAPANVAPAPAAPVAPAAPAAPV 219


>BT011008-1|AAR27879.1|  706|Drosophila melanogaster AT12204p
           protein.
          Length = 706

 Score = 27.9 bits (59), Expect = 3.2
 Identities = 17/32 (53%), Positives = 17/32 (53%), Gaps = 2/32 (6%)
 Frame = +3

Query: 102 ARAAEERLPAGPIAPVA--PTVPVGMGNHPEA 191
           A AA E  PAG  APVA  P  P   G  PEA
Sbjct: 619 APAAAEAPPAGDAAPVAPPPAEPAAEGAAPEA 650


>AE014298-1732|AAF48124.1|  706|Drosophila melanogaster CG18130-PA
           protein.
          Length = 706

 Score = 27.9 bits (59), Expect = 3.2
 Identities = 17/32 (53%), Positives = 17/32 (53%), Gaps = 2/32 (6%)
 Frame = +3

Query: 102 ARAAEERLPAGPIAPVA--PTVPVGMGNHPEA 191
           A AA E  PAG  APVA  P  P   G  PEA
Sbjct: 619 APAAAEAPPAGDAAPVAPPPAEPAAEGAAPEA 650


>AE014297-600|AAF54028.2|  269|Drosophila melanogaster CG31496-PA
           protein.
          Length = 269

 Score = 27.9 bits (59), Expect = 3.2
 Identities = 13/34 (38%), Positives = 15/34 (44%)
 Frame = +3

Query: 66  PPPCLRRATHVKARAAEERLPAGPIAPVAPTVPV 167
           P P     +   A A     PA P+AP AP  PV
Sbjct: 138 PSPVFPAVSPAAAPANVAPAPAAPVAPAAPAAPV 171


>D43795-1|BAA07853.1|  519|Drosophila melanogaster CP-1 protein.
          Length = 519

 Score = 27.1 bits (57), Expect = 5.6
 Identities = 21/72 (29%), Positives = 28/72 (38%), Gaps = 3/72 (4%)
 Frame = +1

Query: 4   RGLRAHPPSSPSLNGSVPSLFLRHACAVRLM---*RHVRRRNGCLRGQLHLWPQLCLWGW 174
           RG+RA  P+  +    V  L + H C  R M    R VR ++ C R  +          W
Sbjct: 95  RGVRAAQPAQAAARQRVEPLLMIHPCCFRKMESQRRTVREQHACDRAGVSSSSLSSGRPW 154

Query: 175 ETIRRQAMLPRR 210
               R    PRR
Sbjct: 155 AEAERVRRWPRR 166


>AY119197-1|AAM51057.1|  189|Drosophila melanogaster SD12705p
           protein.
          Length = 189

 Score = 27.1 bits (57), Expect = 5.6
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = -2

Query: 212 RLLGSMACLRMVSHPHRHSWGHR 144
           R LGS +C+  +S P +  W H+
Sbjct: 24  RRLGSRSCIVRISEPIKSEWAHK 46


>AY069255-1|AAL39400.1|  966|Drosophila melanogaster GM03058p
           protein.
          Length = 966

 Score = 27.1 bits (57), Expect = 5.6
 Identities = 9/25 (36%), Positives = 15/25 (60%)
 Frame = +1

Query: 154 QLCLWGWETIRRQAMLPRRR*KVEY 228
           ++C W WE + ++  LP+ R  V Y
Sbjct: 112 EICSWAWEFLTQRLALPKDRLYVTY 136


>AF188718-1|AAF05593.1|  966|Drosophila melanogaster alanyl-tRNA
           synthetase protein.
          Length = 966

 Score = 27.1 bits (57), Expect = 5.6
 Identities = 9/25 (36%), Positives = 15/25 (60%)
 Frame = +1

Query: 154 QLCLWGWETIRRQAMLPRRR*KVEY 228
           ++C W WE + ++  LP+ R  V Y
Sbjct: 112 EICSWAWEFLTQRLALPKDRLYVTY 136


>AE014134-1481|AAS64737.1|  966|Drosophila melanogaster CG13391-PB,
           isoform B protein.
          Length = 966

 Score = 27.1 bits (57), Expect = 5.6
 Identities = 9/25 (36%), Positives = 15/25 (60%)
 Frame = +1

Query: 154 QLCLWGWETIRRQAMLPRRR*KVEY 228
           ++C W WE + ++  LP+ R  V Y
Sbjct: 112 EICSWAWEFLTQRLALPKDRLYVTY 136


>AE014134-1480|AAF52657.1|  966|Drosophila melanogaster CG13391-PA,
           isoform A protein.
          Length = 966

 Score = 27.1 bits (57), Expect = 5.6
 Identities = 9/25 (36%), Positives = 15/25 (60%)
 Frame = +1

Query: 154 QLCLWGWETIRRQAMLPRRR*KVEY 228
           ++C W WE + ++  LP+ R  V Y
Sbjct: 112 EICSWAWEFLTQRLALPKDRLYVTY 136


>AF121361-3|AAD37505.1|  277|Drosophila melanogaster zinc finger
           protein protein.
          Length = 277

 Score = 26.6 bits (56), Expect = 7.3
 Identities = 14/59 (23%), Positives = 25/59 (42%)
 Frame = -2

Query: 188 LRMVSHPHRHSWGHRCNWPRRQPFLRRTCLYMSRTAQAWRRNKLGTDPFRLGLEGGCAR 12
           LRM+   + ++   RC+    +P    +C+    T + WRR        ++G    C R
Sbjct: 185 LRMIHSGYPYAGVRRCSACSLRPSWWTSCMRFCTTRRPWRRYSRRAPIVQIGASTSCWR 243


>AF121360-1|AAD34351.1|  277|Drosophila melanogaster DNZDHHC/NEW1
           zinc finger protein11 protein.
          Length = 277

 Score = 26.6 bits (56), Expect = 7.3
 Identities = 14/59 (23%), Positives = 25/59 (42%)
 Frame = -2

Query: 188 LRMVSHPHRHSWGHRCNWPRRQPFLRRTCLYMSRTAQAWRRNKLGTDPFRLGLEGGCAR 12
           LRM+   + ++   RC+    +P    +C+    T + WRR        ++G    C R
Sbjct: 185 LRMIHSGYPYAGVRRCSACSLRPSWWTSCMRFCTTRRPWRRYSRRAPIVQIGASTSCWR 243


>BT001688-1|AAN71443.1|  235|Drosophila melanogaster RE58281p
           protein.
          Length = 235

 Score = 26.2 bits (55), Expect = 9.7
 Identities = 11/24 (45%), Positives = 13/24 (54%)
 Frame = -2

Query: 176 SHPHRHSWGHRCNWPRRQPFLRRT 105
           S  H  +  H  +W RRQP  RRT
Sbjct: 129 SSSHNSNSNHGNSWRRRQPLRRRT 152


>AY128487-1|AAM75080.1|  170|Drosophila melanogaster RE73921p
           protein.
          Length = 170

 Score = 26.2 bits (55), Expect = 9.7
 Identities = 17/45 (37%), Positives = 19/45 (42%)
 Frame = +3

Query: 51  GTQLIPPPCLRRATHVKARAAEERLPAGPIAPVAPTVPVGMGNHP 185
           G    PPP  RR   V+ARA     PA   APV    P    + P
Sbjct: 5   GRSASPPPSTRRTAPVQARA-----PAPAPAPVQTRAPAPAASAP 44


>AY122259-1|AAM52771.1| 2176|Drosophila melanogaster SD09011p
           protein.
          Length = 2176

 Score = 26.2 bits (55), Expect = 9.7
 Identities = 15/43 (34%), Positives = 21/43 (48%)
 Frame = +3

Query: 99  KARAAEERLPAGPIAPVAPTVPVGMGNHPEASHAAKEALKSRI 227
           K +  E   P  PIAPV PT           SHA ++A+ +R+
Sbjct: 166 KEKVKEVLPPVVPIAPVTPT----CNRVTRKSHAQEQAINTRV 204


>AL009192-2|CAA15686.1| 2342|Drosophila melanogaster EG:133E12.4
           protein.
          Length = 2342

 Score = 26.2 bits (55), Expect = 9.7
 Identities = 15/43 (34%), Positives = 21/43 (48%)
 Frame = +3

Query: 99  KARAAEERLPAGPIAPVAPTVPVGMGNHPEASHAAKEALKSRI 227
           K +  E   P  PIAPV PT           SHA ++A+ +R+
Sbjct: 290 KEKVKEVLPPVVPIAPVTPT----CNRVTRKSHAQEQAINTRV 328


>AE014298-2527|AAF48701.1|  170|Drosophila melanogaster CG5010-PA
           protein.
          Length = 170

 Score = 26.2 bits (55), Expect = 9.7
 Identities = 17/45 (37%), Positives = 19/45 (42%)
 Frame = +3

Query: 51  GTQLIPPPCLRRATHVKARAAEERLPAGPIAPVAPTVPVGMGNHP 185
           G    PPP  RR   V+ARA     PA   APV    P    + P
Sbjct: 5   GRSASPPPSTRRTAPVQARA-----PAPAPAPVQTRAPAPAASAP 44


>AE014298-308|AAF45704.2| 2301|Drosophila melanogaster CG4399-PB
           protein.
          Length = 2301

 Score = 26.2 bits (55), Expect = 9.7
 Identities = 15/43 (34%), Positives = 21/43 (48%)
 Frame = +3

Query: 99  KARAAEERLPAGPIAPVAPTVPVGMGNHPEASHAAKEALKSRI 227
           K +  E   P  PIAPV PT           SHA ++A+ +R+
Sbjct: 290 KEKVKEVLPPVVPIAPVTPT----CNRVTRKSHAQEQAINTRV 328


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,559,684
Number of Sequences: 53049
Number of extensions: 216554
Number of successful extensions: 870
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 802
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 866
length of database: 24,988,368
effective HSP length: 74
effective length of database: 21,062,742
effective search space used: 695070486
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)