Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0004_L02
(450 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z54237-9|CAA90991.1| 1424|Caenorhabditis elegans Hypothetical pr... 34 0.055
Z54235-11|CAA90978.1| 1424|Caenorhabditis elegans Hypothetical p... 34 0.055
Z73905-4|CAI91175.1| 536|Caenorhabditis elegans Hypothetical pr... 30 0.68
U18385-1|AAA62505.1| 276|Caenorhabditis elegans collagen protein. 30 0.68
Z99281-9|CAB16515.1| 242|Caenorhabditis elegans Hypothetical pr... 29 2.1
U23448-4|AAS80348.1| 330|Caenorhabditis elegans Hypothetical pr... 28 3.6
Z46935-10|CAA87054.1| 1244|Caenorhabditis elegans Hypothetical p... 27 6.3
Z46794-13|CAA86786.1| 1244|Caenorhabditis elegans Hypothetical p... 27 6.3
U96387-1|AAC47834.1| 1244|Caenorhabditis elegans mitotic chromos... 27 6.3
U55857-6|AAA98032.2| 206|Caenorhabditis elegans Rnp (rrm rna bi... 27 6.3
AL031266-2|CAA20330.1| 1244|Caenorhabditis elegans Hypothetical ... 27 6.3
U49946-5|AAX55699.1| 919|Caenorhabditis elegans Diacylglycerol ... 27 8.3
U49946-4|AAC48135.1| 952|Caenorhabditis elegans Diacylglycerol ... 27 8.3
U49946-2|AAC48134.1| 950|Caenorhabditis elegans Diacylglycerol ... 27 8.3
U47144-5|AAB52621.2| 1410|Caenorhabditis elegans Hypothetical pr... 27 8.3
AF022975-9|AAB70669.1| 344|Caenorhabditis elegans Hypothetical ... 27 8.3
>Z54237-9|CAA90991.1| 1424|Caenorhabditis elegans Hypothetical protein
T11B7.4d protein.
Length = 1424
Score = 33.9 bits (74), Expect = 0.055
Identities = 14/34 (41%), Positives = 22/34 (64%)
Frame = +3
Query: 36 FAKHDTEVEMIKAREQIDVIGEKVGEWGAGEGEW 137
F + EV++++ RE+I V+G K GE G E +W
Sbjct: 940 FDIEEEEVDVVQDRERIRVVGRKGGEGGEAEKQW 973
>Z54235-11|CAA90978.1| 1424|Caenorhabditis elegans Hypothetical
protein T11B7.4d protein.
Length = 1424
Score = 33.9 bits (74), Expect = 0.055
Identities = 14/34 (41%), Positives = 22/34 (64%)
Frame = +3
Query: 36 FAKHDTEVEMIKAREQIDVIGEKVGEWGAGEGEW 137
F + EV++++ RE+I V+G K GE G E +W
Sbjct: 940 FDIEEEEVDVVQDRERIRVVGRKGGEGGEAEKQW 973
>Z73905-4|CAI91175.1| 536|Caenorhabditis elegans Hypothetical
protein C32C4.7 protein.
Length = 536
Score = 30.3 bits (65), Expect = 0.68
Identities = 16/46 (34%), Positives = 26/46 (56%)
Frame = +3
Query: 9 QMYANMFDKFAKHDTEVEMIKAREQIDVIGEKVGEWGAGEGEWTDE 146
Q Y N K+ KH T++ I+ E++ +GE +G G + WT+E
Sbjct: 62 QKYENF--KYLKHTTDIIYIQPDEELKKLGEIMGSAGFSK-YWTEE 104
>U18385-1|AAA62505.1| 276|Caenorhabditis elegans collagen protein.
Length = 276
Score = 30.3 bits (65), Expect = 0.68
Identities = 19/51 (37%), Positives = 29/51 (56%)
Frame = -3
Query: 310 LKTACLCMLLEHNVVFFSLPNNL*LVHMFSNCPSLSNKSMFGFSFSNSVGF 158
L +A LC+ + F ++PN + +H F NC + + KS + FSFSN F
Sbjct: 223 LNSAFLCLFYK----FSNIPNCVLFLHFFLNC-NFTCKSKY-FSFSNLANF 267
>Z99281-9|CAB16515.1| 242|Caenorhabditis elegans Hypothetical
protein Y57G11C.14 protein.
Length = 242
Score = 28.7 bits (61), Expect = 2.1
Identities = 13/47 (27%), Positives = 25/47 (53%)
Frame = +1
Query: 130 ESGLTSRETGNPQSSRRKTRTYSCWTRTDSLRTCELITSYLEEKKKP 270
+ G+ T S+ +KT + S +T++++ EL TS ++ K P
Sbjct: 118 DKGVVESTTSTSVSNPKKTTSSSMFTKSEATTISELTTSTFKKAKNP 164
>U23448-4|AAS80348.1| 330|Caenorhabditis elegans Hypothetical
protein C04A2.1 protein.
Length = 330
Score = 27.9 bits (59), Expect = 3.6
Identities = 15/42 (35%), Positives = 20/42 (47%), Gaps = 2/42 (4%)
Frame = +1
Query: 103 RWESGEPERESGLTSR--ETGNPQSSRRKTRTYSCWTRTDSL 222
RWE P R S L R G P + R++ SC +R D +
Sbjct: 58 RWEKENPRRNSHLLQRFVRKGIPHTFRKELWLRSCPSRADGV 99
>Z46935-10|CAA87054.1| 1244|Caenorhabditis elegans Hypothetical
protein M106.1 protein.
Length = 1244
Score = 27.1 bits (57), Expect = 6.3
Identities = 20/69 (28%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
Frame = +3
Query: 126 EGEWTDEQRDRKPTEFEKENPNILLLDKDGQFENM*TNYKLFGREKKTTLCSSNMHKQA- 302
EG W EQ+ ++ E E++ PN + KD + E KL + S+ + K A
Sbjct: 852 EGIW--EQKKKECDELEEKLPNAIAALKDAELEQKAAQAKLNDLKNNQRQISTRLGKIAK 909
Query: 303 VFNQIIKEK 329
+ +I+EK
Sbjct: 910 ECDALIREK 918
>Z46794-13|CAA86786.1| 1244|Caenorhabditis elegans Hypothetical
protein M106.1 protein.
Length = 1244
Score = 27.1 bits (57), Expect = 6.3
Identities = 20/69 (28%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
Frame = +3
Query: 126 EGEWTDEQRDRKPTEFEKENPNILLLDKDGQFENM*TNYKLFGREKKTTLCSSNMHKQA- 302
EG W EQ+ ++ E E++ PN + KD + E KL + S+ + K A
Sbjct: 852 EGIW--EQKKKECDELEEKLPNAIAALKDAELEQKAAQAKLNDLKNNQRQISTRLGKIAK 909
Query: 303 VFNQIIKEK 329
+ +I+EK
Sbjct: 910 ECDALIREK 918
>U96387-1|AAC47834.1| 1244|Caenorhabditis elegans mitotic chromosome
and X-chromosomeassociated MIX-1 protein protein.
Length = 1244
Score = 27.1 bits (57), Expect = 6.3
Identities = 20/69 (28%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
Frame = +3
Query: 126 EGEWTDEQRDRKPTEFEKENPNILLLDKDGQFENM*TNYKLFGREKKTTLCSSNMHKQA- 302
EG W EQ+ ++ E E++ PN + KD + E KL + S+ + K A
Sbjct: 852 EGIW--EQKKKECDELEEKLPNAIAALKDAELEQKAAQAKLNDLKNNQRQISTRLGKIAK 909
Query: 303 VFNQIIKEK 329
+ +I+EK
Sbjct: 910 ECDALIREK 918
>U55857-6|AAA98032.2| 206|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 2 protein.
Length = 206
Score = 27.1 bits (57), Expect = 6.3
Identities = 13/38 (34%), Positives = 22/38 (57%)
Frame = +3
Query: 72 AREQIDVIGEKVGEWGAGEGEWTDEQRDRKPTEFEKEN 185
ARE DV+ ++ G + E ++ E+ +KP +KEN
Sbjct: 85 AREDSDVVAQEKGTYIKREPKYLSEKILKKPKSRKKEN 122
>AL031266-2|CAA20330.1| 1244|Caenorhabditis elegans Hypothetical
protein M106.1 protein.
Length = 1244
Score = 27.1 bits (57), Expect = 6.3
Identities = 20/69 (28%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
Frame = +3
Query: 126 EGEWTDEQRDRKPTEFEKENPNILLLDKDGQFENM*TNYKLFGREKKTTLCSSNMHKQA- 302
EG W EQ+ ++ E E++ PN + KD + E KL + S+ + K A
Sbjct: 852 EGIW--EQKKKECDELEEKLPNAIAALKDAELEQKAAQAKLNDLKNNQRQISTRLGKIAK 909
Query: 303 VFNQIIKEK 329
+ +I+EK
Sbjct: 910 ECDALIREK 918
>U49946-5|AAX55699.1| 919|Caenorhabditis elegans Diacylglycerol
kinase protein 1,isoform e protein.
Length = 919
Score = 26.6 bits (56), Expect = 8.3
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = +1
Query: 208 RTDSLRTCELITSYLEEKKKPH 273
R DSLR ++ Y++EK+ PH
Sbjct: 402 RKDSLRRYHVVRFYVQEKEDPH 423
>U49946-4|AAC48135.1| 952|Caenorhabditis elegans Diacylglycerol
kinase protein 1,isoform b protein.
Length = 952
Score = 26.6 bits (56), Expect = 8.3
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = +1
Query: 208 RTDSLRTCELITSYLEEKKKPH 273
R DSLR ++ Y++EK+ PH
Sbjct: 435 RKDSLRRYHVVRFYVQEKEDPH 456
>U49946-2|AAC48134.1| 950|Caenorhabditis elegans Diacylglycerol
kinase protein 1,isoform a protein.
Length = 950
Score = 26.6 bits (56), Expect = 8.3
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = +1
Query: 208 RTDSLRTCELITSYLEEKKKPH 273
R DSLR ++ Y++EK+ PH
Sbjct: 433 RKDSLRRYHVVRFYVQEKEDPH 454
>U47144-5|AAB52621.2| 1410|Caenorhabditis elegans Hypothetical
protein ZC53.4 protein.
Length = 1410
Score = 26.6 bits (56), Expect = 8.3
Identities = 23/69 (33%), Positives = 29/69 (42%), Gaps = 6/69 (8%)
Frame = +3
Query: 177 KENPNILLLDK-----DGQFENM*TNYKLFGREKKTTLCSSNMHKQAVFNQIIKEKVSKL 341
KE N L +DK DG+F T YK E C S + I K +L
Sbjct: 416 KEKYNFLTIDKSRDLDDGKFRKYKTAYKYAFTEFLIKKCESECKSIIINVSKISNKKKQL 475
Query: 342 LIFQM-YDF 365
LI Q+ +DF
Sbjct: 476 LIEQLHHDF 484
>AF022975-9|AAB70669.1| 344|Caenorhabditis elegans Hypothetical
protein K09C6.2 protein.
Length = 344
Score = 26.6 bits (56), Expect = 8.3
Identities = 16/58 (27%), Positives = 28/58 (48%)
Frame = +3
Query: 141 DEQRDRKPTEFEKENPNILLLDKDGQFENM*TNYKLFGREKKTTLCSSNMHKQAVFNQ 314
D+Q+DRK + E E+ + ++D FE + T G EK + +S + +Q
Sbjct: 254 DKQKDRKGPKDETEDTDATGDEEDSMFEEVKTASNKSGAEKSSAEQTSTAGAETSLSQ 311
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,454,403
Number of Sequences: 27780
Number of extensions: 179818
Number of successful extensions: 627
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 610
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 626
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 788595652
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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