Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0004_K22
         (500 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII pr...    21   6.2  
AF017414-1|AAB70260.1|  209|Tribolium castaneum abdominal-AII pr...    21   6.2  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    21   8.2  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     21   8.2  
AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory recept...    21   8.2  

>AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII
           protein.
          Length = 343

 Score = 21.0 bits (42), Expect = 6.2
 Identities = 9/36 (25%), Positives = 19/36 (52%)
 Frame = -1

Query: 359 KTVVDNFLKENSKEIDESKLIVTDFSDDACTYSSSS 252
           K ++D+ L +  ++    +L  +  ++    YSSSS
Sbjct: 4   KFIIDSMLPKYHQQFHHQQLFQSATTEAPAAYSSSS 39


>AF017414-1|AAB70260.1|  209|Tribolium castaneum abdominal-AII
           protein.
          Length = 209

 Score = 21.0 bits (42), Expect = 6.2
 Identities = 9/36 (25%), Positives = 19/36 (52%)
 Frame = -1

Query: 359 KTVVDNFLKENSKEIDESKLIVTDFSDDACTYSSSS 252
           K ++D+ L +  ++    +L  +  ++    YSSSS
Sbjct: 4   KFIIDSMLPKYHQQFHHQQLFQSATTEAPAAYSSSS 39


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 20.6 bits (41), Expect = 8.2
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = +1

Query: 301  NFDSSISFEFSLRKLSTTVFPSPSK 375
            N DS++ +EF +   +T     PSK
Sbjct: 1271 NLDSNLKYEFWVTAATTIGEGQPSK 1295


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 20.6 bits (41), Expect = 8.2
 Identities = 7/13 (53%), Positives = 8/13 (61%)
 Frame = +3

Query: 459 ACVICRQNTQRCF 497
           AC  C  NTQ C+
Sbjct: 72  ACYDCPYNTQDCY 84


>AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory receptor
           candidate 17 protein.
          Length = 372

 Score = 20.6 bits (41), Expect = 8.2
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = +1

Query: 220 NLHCLAGSIT 249
           N HCL G+IT
Sbjct: 325 NSHCLGGTIT 334


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 90,027
Number of Sequences: 336
Number of extensions: 1701
Number of successful extensions: 9
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11839801
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)