Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0004_K20
(550 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC096756-1|AAH96756.1| 194|Homo sapiens ribosomal protein S9 pr... 280 2e-75
BC071940-1|AAH71940.1| 194|Homo sapiens ribosomal protein S9 pr... 280 2e-75
BC068055-1|AAH68055.1| 194|Homo sapiens ribosomal protein S9 pr... 280 2e-75
BC007857-1|AAH07857.1| 194|Homo sapiens ribosomal protein S9 pr... 280 2e-75
BC007434-1|AAH07434.1| 194|Homo sapiens ribosomal protein S9 pr... 280 2e-75
BC007410-1|AAH07410.1| 194|Homo sapiens ribosomal protein S9 pr... 280 2e-75
BC000802-1|AAH00802.1| 194|Homo sapiens ribosomal protein S9 pr... 280 2e-75
AB061839-1|BAB79477.1| 194|Homo sapiens ribosomal protein S9 pr... 280 2e-75
U14971-1|AAA85659.1| 194|Homo sapiens ribosomal protein S9 prot... 274 1e-73
AL080243-1|CAB62915.1| 194|Homo sapiens protein ( Human DNA seq... 268 9e-72
BC141920-1|AAI41921.1| 113|Homo sapiens RPS9 protein protein. 172 8e-43
AB007150-1|BAA25816.1| 64|Homo sapiens ribosomal protein S9 pr... 126 5e-29
BC011745-1|AAH11745.1| 184|Homo sapiens IMP3, U3 small nucleola... 49 1e-05
BC006487-1|AAH06487.1| 184|Homo sapiens IMP3, U3 small nucleola... 49 1e-05
AY050497-1|AAL06639.1| 184|Homo sapiens BRMS2 protein. 49 1e-05
AK223121-1|BAD96841.1| 184|Homo sapiens U3 snoRNP protein 3 hom... 49 1e-05
AK001830-1|BAA91929.1| 184|Homo sapiens protein ( Homo sapiens ... 49 1e-05
BC101517-1|AAI01518.1| 637|Homo sapiens RAB11 family interactin... 31 2.7
BC093914-1|AAH93914.1| 637|Homo sapiens RAB11 family interactin... 31 2.7
AY169244-1|AAO21970.1| 637|Homo sapiens rab11-family interactin... 31 2.7
AL831830-1|CAD38543.1| 296|Homo sapiens hypothetical protein pr... 31 2.7
AK097424-1|BAC05045.1| 535|Homo sapiens protein ( Homo sapiens ... 31 2.7
AJ314646-1|CAC44535.1| 609|Homo sapiens hypothetical protein pr... 31 2.7
AB058724-1|BAB47450.1| 609|Homo sapiens KIAA1821 protein protein. 31 2.7
>BC096756-1|AAH96756.1| 194|Homo sapiens ribosomal protein S9
protein.
Length = 194
Score = 280 bits (687), Expect = 2e-75
Identities = 134/161 (83%), Positives = 145/161 (90%)
Frame = +3
Query: 66 VFSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKD 245
V KTYVTPRRPFEK+RLDQELK+IGEYGLRNKREVWRVK+TLA+IRKAARELLTL+EKD
Sbjct: 8 VCRKTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKD 67
Query: 246 PKRLFEGNAXXXXXXXXXXXDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHAR 425
P+RLFEGNA DE +MKLDY+LGLKIEDFLERRLQTQVFK GLAKSIHHAR
Sbjct: 68 PRRLFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHAR 127
Query: 426 ILIRQRHIRVRKQVVNIPSFIVRLDSGKHIDFSLKSPFGGG 548
+LIRQRHIRVRKQVVNIPSFIVRLDS KHIDFSL+SP+GGG
Sbjct: 128 VLIRQRHIRVRKQVVNIPSFIVRLDSQKHIDFSLRSPYGGG 168
>BC071940-1|AAH71940.1| 194|Homo sapiens ribosomal protein S9
protein.
Length = 194
Score = 280 bits (687), Expect = 2e-75
Identities = 134/161 (83%), Positives = 145/161 (90%)
Frame = +3
Query: 66 VFSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKD 245
V KTYVTPRRPFEK+RLDQELK+IGEYGLRNKREVWRVK+TLA+IRKAARELLTL+EKD
Sbjct: 8 VCRKTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKD 67
Query: 246 PKRLFEGNAXXXXXXXXXXXDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHAR 425
P+RLFEGNA DE +MKLDY+LGLKIEDFLERRLQTQVFK GLAKSIHHAR
Sbjct: 68 PRRLFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHAR 127
Query: 426 ILIRQRHIRVRKQVVNIPSFIVRLDSGKHIDFSLKSPFGGG 548
+LIRQRHIRVRKQVVNIPSFIVRLDS KHIDFSL+SP+GGG
Sbjct: 128 VLIRQRHIRVRKQVVNIPSFIVRLDSQKHIDFSLRSPYGGG 168
>BC068055-1|AAH68055.1| 194|Homo sapiens ribosomal protein S9
protein.
Length = 194
Score = 280 bits (687), Expect = 2e-75
Identities = 134/161 (83%), Positives = 145/161 (90%)
Frame = +3
Query: 66 VFSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKD 245
V KTYVTPRRPFEK+RLDQELK+IGEYGLRNKREVWRVK+TLA+IRKAARELLTL+EKD
Sbjct: 8 VCRKTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKD 67
Query: 246 PKRLFEGNAXXXXXXXXXXXDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHAR 425
P+RLFEGNA DE +MKLDY+LGLKIEDFLERRLQTQVFK GLAKSIHHAR
Sbjct: 68 PRRLFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHAR 127
Query: 426 ILIRQRHIRVRKQVVNIPSFIVRLDSGKHIDFSLKSPFGGG 548
+LIRQRHIRVRKQVVNIPSFIVRLDS KHIDFSL+SP+GGG
Sbjct: 128 VLIRQRHIRVRKQVVNIPSFIVRLDSQKHIDFSLRSPYGGG 168
>BC007857-1|AAH07857.1| 194|Homo sapiens ribosomal protein S9
protein.
Length = 194
Score = 280 bits (687), Expect = 2e-75
Identities = 134/161 (83%), Positives = 145/161 (90%)
Frame = +3
Query: 66 VFSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKD 245
V KTYVTPRRPFEK+RLDQELK+IGEYGLRNKREVWRVK+TLA+IRKAARELLTL+EKD
Sbjct: 8 VCRKTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKD 67
Query: 246 PKRLFEGNAXXXXXXXXXXXDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHAR 425
P+RLFEGNA DE +MKLDY+LGLKIEDFLERRLQTQVFK GLAKSIHHAR
Sbjct: 68 PRRLFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHAR 127
Query: 426 ILIRQRHIRVRKQVVNIPSFIVRLDSGKHIDFSLKSPFGGG 548
+LIRQRHIRVRKQVVNIPSFIVRLDS KHIDFSL+SP+GGG
Sbjct: 128 VLIRQRHIRVRKQVVNIPSFIVRLDSQKHIDFSLRSPYGGG 168
>BC007434-1|AAH07434.1| 194|Homo sapiens ribosomal protein S9
protein.
Length = 194
Score = 280 bits (687), Expect = 2e-75
Identities = 134/161 (83%), Positives = 145/161 (90%)
Frame = +3
Query: 66 VFSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKD 245
V KTYVTPRRPFEK+RLDQELK+IGEYGLRNKREVWRVK+TLA+IRKAARELLTL+EKD
Sbjct: 8 VCRKTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKD 67
Query: 246 PKRLFEGNAXXXXXXXXXXXDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHAR 425
P+RLFEGNA DE +MKLDY+LGLKIEDFLERRLQTQVFK GLAKSIHHAR
Sbjct: 68 PRRLFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHAR 127
Query: 426 ILIRQRHIRVRKQVVNIPSFIVRLDSGKHIDFSLKSPFGGG 548
+LIRQRHIRVRKQVVNIPSFIVRLDS KHIDFSL+SP+GGG
Sbjct: 128 VLIRQRHIRVRKQVVNIPSFIVRLDSQKHIDFSLRSPYGGG 168
>BC007410-1|AAH07410.1| 194|Homo sapiens ribosomal protein S9
protein.
Length = 194
Score = 280 bits (687), Expect = 2e-75
Identities = 134/161 (83%), Positives = 145/161 (90%)
Frame = +3
Query: 66 VFSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKD 245
V KTYVTPRRPFEK+RLDQELK+IGEYGLRNKREVWRVK+TLA+IRKAARELLTL+EKD
Sbjct: 8 VCRKTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKD 67
Query: 246 PKRLFEGNAXXXXXXXXXXXDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHAR 425
P+RLFEGNA DE +MKLDY+LGLKIEDFLERRLQTQVFK GLAKSIHHAR
Sbjct: 68 PRRLFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHAR 127
Query: 426 ILIRQRHIRVRKQVVNIPSFIVRLDSGKHIDFSLKSPFGGG 548
+LIRQRHIRVRKQVVNIPSFIVRLDS KHIDFSL+SP+GGG
Sbjct: 128 VLIRQRHIRVRKQVVNIPSFIVRLDSQKHIDFSLRSPYGGG 168
>BC000802-1|AAH00802.1| 194|Homo sapiens ribosomal protein S9
protein.
Length = 194
Score = 280 bits (687), Expect = 2e-75
Identities = 134/161 (83%), Positives = 145/161 (90%)
Frame = +3
Query: 66 VFSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKD 245
V KTYVTPRRPFEK+RLDQELK+IGEYGLRNKREVWRVK+TLA+IRKAARELLTL+EKD
Sbjct: 8 VCRKTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKD 67
Query: 246 PKRLFEGNAXXXXXXXXXXXDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHAR 425
P+RLFEGNA DE +MKLDY+LGLKIEDFLERRLQTQVFK GLAKSIHHAR
Sbjct: 68 PRRLFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHAR 127
Query: 426 ILIRQRHIRVRKQVVNIPSFIVRLDSGKHIDFSLKSPFGGG 548
+LIRQRHIRVRKQVVNIPSFIVRLDS KHIDFSL+SP+GGG
Sbjct: 128 VLIRQRHIRVRKQVVNIPSFIVRLDSQKHIDFSLRSPYGGG 168
>AB061839-1|BAB79477.1| 194|Homo sapiens ribosomal protein S9
protein.
Length = 194
Score = 280 bits (687), Expect = 2e-75
Identities = 134/161 (83%), Positives = 145/161 (90%)
Frame = +3
Query: 66 VFSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKD 245
V KTYVTPRRPFEK+RLDQELK+IGEYGLRNKREVWRVK+TLA+IRKAARELLTL+EKD
Sbjct: 8 VCRKTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKD 67
Query: 246 PKRLFEGNAXXXXXXXXXXXDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHAR 425
P+RLFEGNA DE +MKLDY+LGLKIEDFLERRLQTQVFK GLAKSIHHAR
Sbjct: 68 PRRLFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHAR 127
Query: 426 ILIRQRHIRVRKQVVNIPSFIVRLDSGKHIDFSLKSPFGGG 548
+LIRQRHIRVRKQVVNIPSFIVRLDS KHIDFSL+SP+GGG
Sbjct: 128 VLIRQRHIRVRKQVVNIPSFIVRLDSQKHIDFSLRSPYGGG 168
>U14971-1|AAA85659.1| 194|Homo sapiens ribosomal protein S9
protein.
Length = 194
Score = 274 bits (673), Expect = 1e-73
Identities = 133/161 (82%), Positives = 143/161 (88%)
Frame = +3
Query: 66 VFSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKD 245
V KTYVTPRRPFEK+RLDQELK+IGEYGLRNKREVWRVK+TLA+IRKAARELLTL+EKD
Sbjct: 8 VCRKTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKD 67
Query: 246 PKRLFEGNAXXXXXXXXXXXDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHAR 425
P+RLFEGNA DE +MKLDY+LGLKIEDFLERRLQTQVFK GLAKSIHHAR
Sbjct: 68 PRRLFEGNALLRRLVRLGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHAR 127
Query: 426 ILIRQRHIRVRKQVVNIPSFIVRLDSGKHIDFSLKSPFGGG 548
+LIRQRHIRVRKQVVNIPSFIVRLDS KHIDFSL+SP G G
Sbjct: 128 VLIRQRHIRVRKQVVNIPSFIVRLDSQKHIDFSLRSPTGVG 168
>AL080243-1|CAB62915.1| 194|Homo sapiens protein ( Human DNA
sequence from clone RP11-12M9 on chromosome 22. ).
Length = 194
Score = 268 bits (657), Expect = 9e-72
Identities = 130/161 (80%), Positives = 141/161 (87%)
Frame = +3
Query: 66 VFSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKD 245
V KTYVTPRR FEK+RLDQELK+I EYGLRNKREVWRVK+TLA+IRKAARELLTL++KD
Sbjct: 8 VCRKTYVTPRRSFEKSRLDQELKLIEEYGLRNKREVWRVKFTLAKIRKAARELLTLDQKD 67
Query: 246 PKRLFEGNAXXXXXXXXXXXDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHAR 425
P+RLFEGNA DE +MKLDY+LGLKIEDFLERRLQTQVFK GLAKSIHHAR
Sbjct: 68 PRRLFEGNALLWRLVCIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHAR 127
Query: 426 ILIRQRHIRVRKQVVNIPSFIVRLDSGKHIDFSLKSPFGGG 548
+LIRQRH RVRKQVVNIPSFIVRLDS KHIDFSL SP+GGG
Sbjct: 128 VLIRQRHFRVRKQVVNIPSFIVRLDSQKHIDFSLCSPYGGG 168
>BC141920-1|AAI41921.1| 113|Homo sapiens RPS9 protein protein.
Length = 113
Score = 172 bits (418), Expect = 8e-43
Identities = 82/103 (79%), Positives = 89/103 (86%)
Frame = +3
Query: 240 KDPKRLFEGNAXXXXXXXXXXXDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHH 419
+DP+RLFEGNA DE +MKLDY+LGLKIEDFLERRLQTQVFK GLAKSIHH
Sbjct: 5 EDPRRLFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHH 64
Query: 420 ARILIRQRHIRVRKQVVNIPSFIVRLDSGKHIDFSLKSPFGGG 548
AR+LIRQRHIRVRKQVVNIPSFIVRLDS KHIDFSL+SP+GGG
Sbjct: 65 ARVLIRQRHIRVRKQVVNIPSFIVRLDSQKHIDFSLRSPYGGG 107
>AB007150-1|BAA25816.1| 64|Homo sapiens ribosomal protein S9
protein.
Length = 64
Score = 126 bits (304), Expect = 5e-29
Identities = 57/63 (90%), Positives = 63/63 (100%)
Frame = +3
Query: 75 KTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKDPKR 254
KTYVTPRRPFEK+RLDQELK+IGEYGLRNKREVWRVK+TLA+IRKAARELLTL+EKDP+R
Sbjct: 2 KTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKDPRR 61
Query: 255 LFE 263
LFE
Sbjct: 62 LFE 64
>BC011745-1|AAH11745.1| 184|Homo sapiens IMP3, U3 small nucleolar
ribonucleoprotein, homolog (yeast) protein.
Length = 184
Score = 48.8 bits (111), Expect = 1e-05
Identities = 32/122 (26%), Positives = 54/122 (44%)
Frame = +3
Query: 126 ELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKDPKRLFEGNAXXXXXXXXXXX 305
EL+++ Y L+ + + R +R+ AR L L E+D R+ +A
Sbjct: 30 ELRVLRRYRLQRREDYTRYNQLSRAVRELARRLRDLPERDQFRV-RASAALLDKLYALGL 88
Query: 306 DEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHARILIRQRHIRVRKQVVNIPSF 485
+ L+ + F RRL T + K +A+ + A + Q H+RV VV P+F
Sbjct: 89 VPTRGSLELCDFVTASSFCRRRLPTVLLKLRMAQHLQAAVAFVEQGHVRVGPDVVTDPAF 148
Query: 486 IV 491
+V
Sbjct: 149 LV 150
>BC006487-1|AAH06487.1| 184|Homo sapiens IMP3, U3 small nucleolar
ribonucleoprotein, homolog (yeast) protein.
Length = 184
Score = 48.8 bits (111), Expect = 1e-05
Identities = 32/122 (26%), Positives = 54/122 (44%)
Frame = +3
Query: 126 ELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKDPKRLFEGNAXXXXXXXXXXX 305
EL+++ Y L+ + + R +R+ AR L L E+D R+ +A
Sbjct: 30 ELRVLRRYRLQRREDYTRYNQLSRAVRELARRLRDLPERDQFRV-RASAALLDKLYALGL 88
Query: 306 DEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHARILIRQRHIRVRKQVVNIPSF 485
+ L+ + F RRL T + K +A+ + A + Q H+RV VV P+F
Sbjct: 89 VPTRGSLELCDFVTASSFCRRRLPTVLLKLRMAQHLQAAVAFVEQGHVRVGPDVVTDPAF 148
Query: 486 IV 491
+V
Sbjct: 149 LV 150
>AY050497-1|AAL06639.1| 184|Homo sapiens BRMS2 protein.
Length = 184
Score = 48.8 bits (111), Expect = 1e-05
Identities = 32/122 (26%), Positives = 54/122 (44%)
Frame = +3
Query: 126 ELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKDPKRLFEGNAXXXXXXXXXXX 305
EL+++ Y L+ + + R +R+ AR L L E+D R+ +A
Sbjct: 30 ELRVLRRYRLQRREDYTRYNQLSRAVRELARRLRDLPERDQFRV-RASAALLDKLYALGL 88
Query: 306 DEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHARILIRQRHIRVRKQVVNIPSF 485
+ L+ + F RRL T + K +A+ + A + Q H+RV VV P+F
Sbjct: 89 VPTRGSLELCDFVTASSFCRRRLPTVLLKLRMAQHLQAAVAFVEQGHVRVGPDVVTDPAF 148
Query: 486 IV 491
+V
Sbjct: 149 LV 150
>AK223121-1|BAD96841.1| 184|Homo sapiens U3 snoRNP protein 3
homolog protein.
Length = 184
Score = 48.8 bits (111), Expect = 1e-05
Identities = 32/122 (26%), Positives = 54/122 (44%)
Frame = +3
Query: 126 ELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKDPKRLFEGNAXXXXXXXXXXX 305
EL+++ Y L+ + + R +R+ AR L L E+D R+ +A
Sbjct: 30 ELRVLRRYRLQRREDYTRYNQLSRAVRELARRLRDLPERDQFRV-RASAALLDKLYALGL 88
Query: 306 DEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHARILIRQRHIRVRKQVVNIPSF 485
+ L+ + F RRL T + K +A+ + A + Q H+RV VV P+F
Sbjct: 89 VPTRGSLELCDFVTASSFCRRRLPTVLLKLRMAQHLQAAVAFVEQGHVRVGPDVVTDPAF 148
Query: 486 IV 491
+V
Sbjct: 149 LV 150
>AK001830-1|BAA91929.1| 184|Homo sapiens protein ( Homo sapiens
cDNA FLJ10968 fis, clone PLACE1000863, moderately
similar to PUTATIVE MITOCHONDRIAL 40S RIBOSOMAL PROTEIN
YHR148W. ).
Length = 184
Score = 48.8 bits (111), Expect = 1e-05
Identities = 32/122 (26%), Positives = 54/122 (44%)
Frame = +3
Query: 126 ELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKDPKRLFEGNAXXXXXXXXXXX 305
EL+++ Y L+ + + R +R+ AR L L E+D R+ +A
Sbjct: 30 ELRVLRRYRLQRREDYTRYNQLSRAVRELARRLRDLPERDQFRV-RASAALLDKLYALGL 88
Query: 306 DEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHARILIRQRHIRVRKQVVNIPSF 485
+ L+ + F RRL T + K +A+ + A + Q H+RV VV P+F
Sbjct: 89 VPTRGSLELCDFVTASSFCRRRLPTVLLKLRMAQHLQAAVAFVEQGHVRVGPDVVTDPAF 148
Query: 486 IV 491
+V
Sbjct: 149 LV 150
>BC101517-1|AAI01518.1| 637|Homo sapiens RAB11 family interacting
protein 4 (class II) protein.
Length = 637
Score = 31.1 bits (67), Expect = 2.7
Identities = 22/65 (33%), Positives = 34/65 (52%), Gaps = 6/65 (9%)
Frame = -3
Query: 491 DDERRNVHHLLADTNMPLSDQ---DAGMMD*LRKTSLEHLSLKTALQEV---LNLQTEHI 330
D+ER+ + L DT++ L D+ MMD LR+ LE + A QE+ L + EH+
Sbjct: 451 DEERQRMSDRLEDTSLRLKDEMDLYKRMMDKLRQNRLEFQKEREATQELIEDLRKELEHL 510
Query: 329 IQFHL 315
+ L
Sbjct: 511 QMYKL 515
>BC093914-1|AAH93914.1| 637|Homo sapiens RAB11 family interacting
protein 4 (class II) protein.
Length = 637
Score = 31.1 bits (67), Expect = 2.7
Identities = 22/65 (33%), Positives = 34/65 (52%), Gaps = 6/65 (9%)
Frame = -3
Query: 491 DDERRNVHHLLADTNMPLSDQ---DAGMMD*LRKTSLEHLSLKTALQEV---LNLQTEHI 330
D+ER+ + L DT++ L D+ MMD LR+ LE + A QE+ L + EH+
Sbjct: 451 DEERQRMSDRLEDTSLRLKDEMDLYKRMMDKLRQNRLEFQKEREATQELIEDLRKELEHL 510
Query: 329 IQFHL 315
+ L
Sbjct: 511 QMYKL 515
>AY169244-1|AAO21970.1| 637|Homo sapiens rab11-family interacting
protein 4 protein.
Length = 637
Score = 31.1 bits (67), Expect = 2.7
Identities = 22/65 (33%), Positives = 34/65 (52%), Gaps = 6/65 (9%)
Frame = -3
Query: 491 DDERRNVHHLLADTNMPLSDQ---DAGMMD*LRKTSLEHLSLKTALQEV---LNLQTEHI 330
D+ER+ + L DT++ L D+ MMD LR+ LE + A QE+ L + EH+
Sbjct: 451 DEERQRMSDRLEDTSLRLKDEMDLYKRMMDKLRQNRLEFQKEREATQELIEDLRKELEHL 510
Query: 329 IQFHL 315
+ L
Sbjct: 511 QMYKL 515
>AL831830-1|CAD38543.1| 296|Homo sapiens hypothetical protein
protein.
Length = 296
Score = 31.1 bits (67), Expect = 2.7
Identities = 22/65 (33%), Positives = 34/65 (52%), Gaps = 6/65 (9%)
Frame = -3
Query: 491 DDERRNVHHLLADTNMPLSDQ---DAGMMD*LRKTSLEHLSLKTALQEV---LNLQTEHI 330
D+ER+ + L DT++ L D+ MMD LR+ LE + A QE+ L + EH+
Sbjct: 110 DEERQRMSDRLEDTSLRLKDEMDLYKRMMDKLRQNRLEFQKEREATQELIEDLRKELEHL 169
Query: 329 IQFHL 315
+ L
Sbjct: 170 QMYKL 174
>AK097424-1|BAC05045.1| 535|Homo sapiens protein ( Homo sapiens
cDNA FLJ40105 fis, clone TESTI2006383. ).
Length = 535
Score = 31.1 bits (67), Expect = 2.7
Identities = 22/65 (33%), Positives = 34/65 (52%), Gaps = 6/65 (9%)
Frame = -3
Query: 491 DDERRNVHHLLADTNMPLSDQ---DAGMMD*LRKTSLEHLSLKTALQEV---LNLQTEHI 330
D+ER+ + L DT++ L D+ MMD LR+ LE + A QE+ L + EH+
Sbjct: 349 DEERQRMSDRLEDTSLRLKDEMDLYKRMMDKLRQNRLEFQKEREATQELIEDLRKELEHL 408
Query: 329 IQFHL 315
+ L
Sbjct: 409 QMYKL 413
>AJ314646-1|CAC44535.1| 609|Homo sapiens hypothetical protein
protein.
Length = 609
Score = 31.1 bits (67), Expect = 2.7
Identities = 22/65 (33%), Positives = 34/65 (52%), Gaps = 6/65 (9%)
Frame = -3
Query: 491 DDERRNVHHLLADTNMPLSDQ---DAGMMD*LRKTSLEHLSLKTALQEV---LNLQTEHI 330
D+ER+ + L DT++ L D+ MMD LR+ LE + A QE+ L + EH+
Sbjct: 423 DEERQRMSDRLEDTSLRLKDEMDLYKRMMDKLRQNRLEFQKEREATQELIEDLRKELEHL 482
Query: 329 IQFHL 315
+ L
Sbjct: 483 QMYKL 487
>AB058724-1|BAB47450.1| 609|Homo sapiens KIAA1821 protein protein.
Length = 609
Score = 31.1 bits (67), Expect = 2.7
Identities = 22/65 (33%), Positives = 34/65 (52%), Gaps = 6/65 (9%)
Frame = -3
Query: 491 DDERRNVHHLLADTNMPLSDQ---DAGMMD*LRKTSLEHLSLKTALQEV---LNLQTEHI 330
D+ER+ + L DT++ L D+ MMD LR+ LE + A QE+ L + EH+
Sbjct: 423 DEERQRMSDRLEDTSLRLKDEMDLYKRMMDKLRQNRLEFQKEREATQELIEDLRKELEHL 482
Query: 329 IQFHL 315
+ L
Sbjct: 483 QMYKL 487
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 79,248,422
Number of Sequences: 237096
Number of extensions: 1733443
Number of successful extensions: 4500
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 4258
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4500
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5421005376
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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