Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0004_K16
(414 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1al... 272 1e-75
X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alp... 270 5e-75
EF013227-1|ABK54581.1| 119|Apis mellifera elongation factor 1-a... 215 2e-58
AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor 1-a... 69 2e-14
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 24 0.78
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 22 3.2
AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex det... 22 3.2
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 21 4.2
AY703618-1|AAU12614.1| 136|Apis mellifera wingless protein. 21 5.5
AY222546-1|AAP69221.1| 135|Apis mellifera wingless protein. 21 5.5
AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex det... 21 7.3
AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex det... 21 7.3
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr... 21 7.3
AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced prot... 21 7.3
DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex det... 20 9.6
DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex det... 20 9.6
DQ151547-1|ABA39280.1| 405|Apis mellifera tyramine receptor pro... 20 9.6
AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex det... 20 9.6
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. 20 9.6
>AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1alpha
F2 protein.
Length = 461
Score = 272 bits (667), Expect = 1e-75
Identities = 125/136 (91%), Positives = 132/136 (97%)
Frame = +2
Query: 5 EEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPRGAADFTAQVIVLNHPGQISNGYTP 184
+EAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPP+GAADFTAQVIVLNHPGQISNGYTP
Sbjct: 300 QEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPKGAADFTAQVIVLNHPGQISNGYTP 359
Query: 185 VLDCHTAHIACKFAEIKEKVDRRTGKSTEDNPKSIKSGDAAIVNLVPSKPLCVESFQEFP 364
VLDCHTAHIACKFA+IKEK DRR GK+TE+NPKSIKSGDAAIV LVPSKP+C E+FQEFP
Sbjct: 360 VLDCHTAHIACKFADIKEKCDRRNGKTTEENPKSIKSGDAAIVMLVPSKPMCAEAFQEFP 419
Query: 365 PLGRFAVRDMRQTVAV 412
PLGRFAVRDMRQTVAV
Sbjct: 420 PLGRFAVRDMRQTVAV 435
>X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alpha
protein.
Length = 461
Score = 270 bits (661), Expect = 5e-75
Identities = 124/135 (91%), Positives = 131/135 (97%)
Frame = +2
Query: 8 EAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPRGAADFTAQVIVLNHPGQISNGYTPV 187
EA+PGDNVGFNVKN+SVKELRRGYVAGDSKN PPRGAADFTAQVIVLNHPGQISNGYTPV
Sbjct: 301 EALPGDNVGFNVKNISVKELRRGYVAGDSKNQPPRGAADFTAQVIVLNHPGQISNGYTPV 360
Query: 188 LDCHTAHIACKFAEIKEKVDRRTGKSTEDNPKSIKSGDAAIVNLVPSKPLCVESFQEFPP 367
LDCHTAHIACKFAEIKEK DRRTGK+TE+NPKSIKSGDAAIV L P+KP+CVE+FQEFPP
Sbjct: 361 LDCHTAHIACKFAEIKEKCDRRTGKTTEENPKSIKSGDAAIVMLQPTKPMCVEAFQEFPP 420
Query: 368 LGRFAVRDMRQTVAV 412
LGRFAVRDMRQTVAV
Sbjct: 421 LGRFAVRDMRQTVAV 435
>EF013227-1|ABK54581.1| 119|Apis mellifera elongation factor
1-alpha protein.
Length = 119
Score = 215 bits (525), Expect = 2e-58
Identities = 99/108 (91%), Positives = 104/108 (96%)
Frame = +2
Query: 8 EAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPRGAADFTAQVIVLNHPGQISNGYTPV 187
EA+PGDNVGFNVKN+SVKELRRGYVAGDSKN PPRGAADFTAQVIVLNHPGQISNGYTPV
Sbjct: 12 EALPGDNVGFNVKNISVKELRRGYVAGDSKNQPPRGAADFTAQVIVLNHPGQISNGYTPV 71
Query: 188 LDCHTAHIACKFAEIKEKVDRRTGKSTEDNPKSIKSGDAAIVNLVPSK 331
LDCHTAHIACKFAEIKEK DRRTGK+TE+NPKSIKSGDAAIV L P+K
Sbjct: 72 LDCHTAHIACKFAEIKEKCDRRTGKTTEENPKSIKSGDAAIVMLQPTK 119
>AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor
1-alpha protein.
Length = 274
Score = 68.9 bits (161), Expect = 2e-14
Identities = 31/32 (96%), Positives = 32/32 (100%)
Frame = +2
Query: 5 EEAVPGDNVGFNVKNVSVKELRRGYVAGDSKN 100
+EAVPGDNVGFNVKNVSVKELRRGYVAGDSKN
Sbjct: 243 QEAVPGDNVGFNVKNVSVKELRRGYVAGDSKN 274
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 23.8 bits (49), Expect = 0.78
Identities = 12/37 (32%), Positives = 17/37 (45%)
Frame = +1
Query: 97 KQPTQGSCRLHSASHCAKSPRSNIKRIHTCIGLPHSP 207
K TQ S + + + P S +R HT G+P P
Sbjct: 1048 KTYTQYSVVVQAFNKVGSGPMSEERRQHTAEGVPEQP 1084
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 21.8 bits (44), Expect = 3.2
Identities = 11/36 (30%), Positives = 20/36 (55%)
Frame = +2
Query: 53 SVKELRRGYVAGDSKNNPPRGAADFTAQVIVLNHPG 160
S ++LR ++A + + P+G Q++VLN G
Sbjct: 283 STRDLREIHLAYNGLRDLPKGIFTRLEQLLVLNLAG 318
Score = 21.4 bits (43), Expect = 4.2
Identities = 11/28 (39%), Positives = 14/28 (50%)
Frame = -3
Query: 355 LEGLHTQGLGGNQVDNGGITRFNGFRVV 272
L LHT L N++ G FNG V+
Sbjct: 382 LYNLHTLELSDNKLRTVGAQLFNGLFVL 409
>AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.8 bits (44), Expect = 3.2
Identities = 8/21 (38%), Positives = 14/21 (66%)
Frame = +3
Query: 240 KSTVVLVNQQRTTLNPLNLVM 302
KST V +R T+NP ++++
Sbjct: 142 KSTTTTVEVKRDTINPEDVIL 162
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 21.4 bits (43), Expect = 4.2
Identities = 11/41 (26%), Positives = 18/41 (43%)
Frame = +3
Query: 24 TMLVSTSKTYLSRNCAVVTLQEIRKTTHPGELQTSQRKSLC 146
++ V TS + L + + + R HP EL+ S C
Sbjct: 402 SLFVETSASELVESSVLFPSLDSRDELHPRELEAVNLGSAC 442
>AY703618-1|AAU12614.1| 136|Apis mellifera wingless protein.
Length = 136
Score = 21.0 bits (42), Expect = 5.5
Identities = 9/22 (40%), Positives = 11/22 (50%)
Frame = +2
Query: 275 NPKSIKSGDAAIVNLVPSKPLC 340
NP+ G +V L PS P C
Sbjct: 66 NPEHKPPGPKDLVYLEPSPPFC 87
>AY222546-1|AAP69221.1| 135|Apis mellifera wingless protein.
Length = 135
Score = 21.0 bits (42), Expect = 5.5
Identities = 9/22 (40%), Positives = 11/22 (50%)
Frame = +2
Query: 275 NPKSIKSGDAAIVNLVPSKPLC 340
NP+ G +V L PS P C
Sbjct: 67 NPEHKPPGPKDLVYLEPSPPFC 88
>AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 20.6 bits (41), Expect = 7.3
Identities = 7/21 (33%), Positives = 14/21 (66%)
Frame = +3
Query: 240 KSTVVLVNQQRTTLNPLNLVM 302
KST+ V +R +NP ++++
Sbjct: 131 KSTITTVEVKRDIINPEDVIL 151
>AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 20.6 bits (41), Expect = 7.3
Identities = 7/21 (33%), Positives = 14/21 (66%)
Frame = +3
Query: 240 KSTVVLVNQQRTTLNPLNLVM 302
KST+ V +R +NP ++++
Sbjct: 142 KSTITTVEVKRDIINPEDVIL 162
>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
protein.
Length = 1308
Score = 20.6 bits (41), Expect = 7.3
Identities = 12/45 (26%), Positives = 20/45 (44%)
Frame = +1
Query: 112 GSCRLHSASHCAKSPRSNIKRIHTCIGLPHSPHSLQICRNQRESR 246
G LHSA S SN+ + T + P +Q + ++S+
Sbjct: 938 GHSVLHSAQSVVASSASNVTNVTTNLTTILPPVKVQSQQQSQQSQ 982
>AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced protein
75 protein.
Length = 900
Score = 20.6 bits (41), Expect = 7.3
Identities = 10/21 (47%), Positives = 11/21 (52%)
Frame = +1
Query: 100 QPTQGSCRLHSASHCAKSPRS 162
Q TQ LH S A+SP S
Sbjct: 665 QHTQSQLHLHLTSPPARSPSS 685
>DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 20.2 bits (40), Expect = 9.6
Identities = 9/21 (42%), Positives = 11/21 (52%)
Frame = +2
Query: 233 KEKVDRRTGKSTEDNPKSIKS 295
KE+ RT + T PK I S
Sbjct: 64 KERSQDRTERETSKEPKIISS 84
>DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 20.2 bits (40), Expect = 9.6
Identities = 9/21 (42%), Positives = 11/21 (52%)
Frame = +2
Query: 233 KEKVDRRTGKSTEDNPKSIKS 295
KE+ RT + T PK I S
Sbjct: 64 KERSQDRTERETSKEPKIISS 84
>DQ151547-1|ABA39280.1| 405|Apis mellifera tyramine receptor
protein.
Length = 405
Score = 20.2 bits (40), Expect = 9.6
Identities = 7/19 (36%), Positives = 11/19 (57%)
Frame = +3
Query: 264 QQRTTLNPLNLVMPPLSTW 320
+ RT L+P N +P + W
Sbjct: 380 KSRTNLDPSNRKLPAPANW 398
>AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 20.2 bits (40), Expect = 9.6
Identities = 7/21 (33%), Positives = 13/21 (61%)
Frame = +3
Query: 240 KSTVVLVNQQRTTLNPLNLVM 302
KST +R T+NP ++++
Sbjct: 142 KSTTTTAEVKRDTINPEDVIL 162
>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
Length = 1598
Score = 20.2 bits (40), Expect = 9.6
Identities = 13/55 (23%), Positives = 22/55 (40%)
Frame = +1
Query: 88 RFEKQPTQGSCRLHSASHCAKSPRSNIKRIHTCIGLPHSPHSLQICRNQRESRPS 252
+ K P S ++ S S N+ R G+P ++ RNQ++ S
Sbjct: 1261 QMSKVPRDVSEGIYDGSGANGSFLDNLIRSSLETGIPRDQRAMTEARNQQQQASS 1315
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 134,790
Number of Sequences: 438
Number of extensions: 3055
Number of successful extensions: 20
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 10503195
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
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