Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0004_K14
(577 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC111945-1|AAI11946.1| 748|Homo sapiens SMAD specific E3 ubiqui... 30 5.1
BC093876-1|AAH93876.1| 748|Homo sapiens SMAD specific E3 ubiqui... 30 5.1
AY014180-1|AAG50421.1| 748|Homo sapiens E3 ubiquitin ligase Smu... 30 5.1
AF310676-1|AAG45422.1| 748|Homo sapiens E3 ubiquitin ligase SMU... 30 5.1
AF301463-1|AAG25641.1| 748|Homo sapiens ubiquitin E3 ligase SMU... 30 5.1
BC052970-1|AAH52970.1| 585|Homo sapiens YTH domain family, memb... 30 6.7
AK093081-1|BAC04046.1| 534|Homo sapiens protein ( Homo sapiens ... 30 6.7
AK056219-1|BAB71122.1| 543|Homo sapiens protein ( Homo sapiens ... 30 6.7
D86974-1|BAA13210.2| 884|Homo sapiens KIAA0220 protein. 29 8.9
BC114486-1|AAI14487.1| 1281|Homo sapiens SH3TC2 protein protein. 29 8.9
BC113879-1|AAI13880.1| 1288|Homo sapiens SH3 domain and tetratri... 29 8.9
BC073943-1|AAH73943.1| 361|Homo sapiens DKFZp547E087 protein pr... 29 8.9
AY341075-1|AAR03497.1| 1288|Homo sapiens KIAA1985 protein. 29 8.9
AK128772-1|BAC87606.1| 834|Homo sapiens protein ( Homo sapiens ... 29 8.9
AK127130-1|BAC86842.1| 266|Homo sapiens protein ( Homo sapiens ... 29 8.9
AK023667-1|BAB14631.1| 150|Homo sapiens protein ( Homo sapiens ... 29 8.9
AB209632-1|BAD92869.1| 854|Homo sapiens PI-3-kinase-related kin... 29 8.9
AB075865-1|BAB85571.1| 955|Homo sapiens KIAA1985 protein protein. 29 8.9
>BC111945-1|AAI11946.1| 748|Homo sapiens SMAD specific E3 ubiquitin
protein ligase 2 protein.
Length = 748
Score = 30.3 bits (65), Expect = 5.1
Identities = 12/40 (30%), Positives = 19/40 (47%)
Frame = +1
Query: 130 RQRRKMKKWQYSHCCYRLHRSSLCNSCYLKIMKLCPASLW 249
RQ ++ Q HC + R + Y ++MK+ P LW
Sbjct: 380 RQELSQQQPQAGHCRIEVSREEIFEESYRQVMKMRPKDLW 419
>BC093876-1|AAH93876.1| 748|Homo sapiens SMAD specific E3 ubiquitin
protein ligase 2 protein.
Length = 748
Score = 30.3 bits (65), Expect = 5.1
Identities = 12/40 (30%), Positives = 19/40 (47%)
Frame = +1
Query: 130 RQRRKMKKWQYSHCCYRLHRSSLCNSCYLKIMKLCPASLW 249
RQ ++ Q HC + R + Y ++MK+ P LW
Sbjct: 380 RQELSQQQPQAGHCRIEVSREEIFEESYRQVMKMRPKDLW 419
>AY014180-1|AAG50421.1| 748|Homo sapiens E3 ubiquitin ligase Smurf2
protein.
Length = 748
Score = 30.3 bits (65), Expect = 5.1
Identities = 12/40 (30%), Positives = 19/40 (47%)
Frame = +1
Query: 130 RQRRKMKKWQYSHCCYRLHRSSLCNSCYLKIMKLCPASLW 249
RQ ++ Q HC + R + Y ++MK+ P LW
Sbjct: 380 RQELSQQQPQAGHCRIEVSREEIFEESYRQVMKMRPKDLW 419
>AF310676-1|AAG45422.1| 748|Homo sapiens E3 ubiquitin ligase SMURF2
protein.
Length = 748
Score = 30.3 bits (65), Expect = 5.1
Identities = 12/40 (30%), Positives = 19/40 (47%)
Frame = +1
Query: 130 RQRRKMKKWQYSHCCYRLHRSSLCNSCYLKIMKLCPASLW 249
RQ ++ Q HC + R + Y ++MK+ P LW
Sbjct: 380 RQELSQQQPQAGHCRIEVSREEIFEESYRQVMKMRPKDLW 419
>AF301463-1|AAG25641.1| 748|Homo sapiens ubiquitin E3 ligase SMURF2
protein.
Length = 748
Score = 30.3 bits (65), Expect = 5.1
Identities = 12/40 (30%), Positives = 19/40 (47%)
Frame = +1
Query: 130 RQRRKMKKWQYSHCCYRLHRSSLCNSCYLKIMKLCPASLW 249
RQ ++ Q HC + R + Y ++MK+ P LW
Sbjct: 380 RQELSQQQPQAGHCRIEVSREEIFEESYRQVMKMRPKDLW 419
>BC052970-1|AAH52970.1| 585|Homo sapiens YTH domain family, member
3 protein.
Length = 585
Score = 29.9 bits (64), Expect = 6.7
Identities = 21/61 (34%), Positives = 29/61 (47%), Gaps = 2/61 (3%)
Frame = +3
Query: 396 NPGAGERRANLTALP--SVPSSLTVHHVSRAVKHYTNYTNNYPEHADNVLVPGKSTVVLS 569
N GAG L +P + PSS+ VH V +K NY P+ D L G+ ++ S
Sbjct: 367 NNGAGSENFGLGVVPVSASPSSVEVHPVLEKLKAINNYN---PKDFDWNLKNGRVFIIKS 423
Query: 570 Y 572
Y
Sbjct: 424 Y 424
>AK093081-1|BAC04046.1| 534|Homo sapiens protein ( Homo sapiens
cDNA FLJ35762 fis, clone TESTI2004793, moderately
similar to Homo sapiens NY-REN-2 antigen mRNA. ).
Length = 534
Score = 29.9 bits (64), Expect = 6.7
Identities = 21/61 (34%), Positives = 29/61 (47%), Gaps = 2/61 (3%)
Frame = +3
Query: 396 NPGAGERRANLTALP--SVPSSLTVHHVSRAVKHYTNYTNNYPEHADNVLVPGKSTVVLS 569
N GAG L +P + PSS+ VH V +K NY P+ D L G+ ++ S
Sbjct: 316 NNGAGSENFGLGVVPVSASPSSVEVHPVLEKLKAINNYN---PKDFDWNLKNGRVFIIKS 372
Query: 570 Y 572
Y
Sbjct: 373 Y 373
>AK056219-1|BAB71122.1| 543|Homo sapiens protein ( Homo sapiens
cDNA FLJ31657 fis, clone NT2RI2004304, moderately
similar to Homo sapiens NY-REN-2 antigen mRNA. ).
Length = 543
Score = 29.9 bits (64), Expect = 6.7
Identities = 21/61 (34%), Positives = 29/61 (47%), Gaps = 2/61 (3%)
Frame = +3
Query: 396 NPGAGERRANLTALP--SVPSSLTVHHVSRAVKHYTNYTNNYPEHADNVLVPGKSTVVLS 569
N GAG L +P + PSS+ VH V +K NY P+ D L G+ ++ S
Sbjct: 367 NNGAGSENFGLGVVPVSASPSSVEVHPVLEKLKAINNYN---PKDFDWNLKNGRVFIIKS 423
Query: 570 Y 572
Y
Sbjct: 424 Y 424
>D86974-1|BAA13210.2| 884|Homo sapiens KIAA0220 protein.
Length = 884
Score = 29.5 bits (63), Expect = 8.9
Identities = 24/81 (29%), Positives = 39/81 (48%), Gaps = 3/81 (3%)
Frame = -3
Query: 410 PRAGVVHRHVPGVASLPSRTS---YELVVGGVDGRYRHDAVLSVCDGRVLAQRHQVTHRL 240
P+ ++ RH+P V+SLP ++++ RH + SVC GR QR ++ L
Sbjct: 539 PQRMIISRHLPSVSSLPFHPQLHPQQMIIS------RH--LPSVCGGRFHPQRMIISRHL 590
Query: 239 AGQSFIIFR*QLLQREDRCSR 177
S + F QL ++ SR
Sbjct: 591 PSVSSLPFHTQLHPQQMIISR 611
>BC114486-1|AAI14487.1| 1281|Homo sapiens SH3TC2 protein protein.
Length = 1281
Score = 29.5 bits (63), Expect = 8.9
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = +1
Query: 175 YRLHRSSLCNSCYLKIMKLCP 237
Y LH + CYLK + LCP
Sbjct: 1170 YSLHMYEMAEDCYLKTLSLCP 1190
>BC113879-1|AAI13880.1| 1288|Homo sapiens SH3 domain and
tetratricopeptide repeats 2 protein.
Length = 1288
Score = 29.5 bits (63), Expect = 8.9
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = +1
Query: 175 YRLHRSSLCNSCYLKIMKLCP 237
Y LH + CYLK + LCP
Sbjct: 1177 YSLHMYEMAEDCYLKTLSLCP 1197
>BC073943-1|AAH73943.1| 361|Homo sapiens DKFZp547E087 protein
protein.
Length = 361
Score = 29.5 bits (63), Expect = 8.9
Identities = 24/81 (29%), Positives = 39/81 (48%), Gaps = 3/81 (3%)
Frame = -3
Query: 410 PRAGVVHRHVPGVASLPSRTS---YELVVGGVDGRYRHDAVLSVCDGRVLAQRHQVTHRL 240
P+ ++ RH+P V+SLP ++++ RH + SVC GR QR ++ L
Sbjct: 16 PQQMIISRHLPSVSSLPFHPQLHPQQMIIS------RH--LPSVCGGRFHPQRMIISRHL 67
Query: 239 AGQSFIIFR*QLLQREDRCSR 177
S + F QL ++ SR
Sbjct: 68 PSVSSLPFHPQLHPQQMIISR 88
>AY341075-1|AAR03497.1| 1288|Homo sapiens KIAA1985 protein.
Length = 1288
Score = 29.5 bits (63), Expect = 8.9
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = +1
Query: 175 YRLHRSSLCNSCYLKIMKLCP 237
Y LH + CYLK + LCP
Sbjct: 1177 YSLHMYEMAEDCYLKTLSLCP 1197
>AK128772-1|BAC87606.1| 834|Homo sapiens protein ( Homo sapiens
cDNA FLJ45371 fis, clone BRHIP3017855, highly similar
to Homo sapiens nuclear pore complex interacting protein
(NPIP). ).
Length = 834
Score = 29.5 bits (63), Expect = 8.9
Identities = 24/81 (29%), Positives = 39/81 (48%), Gaps = 3/81 (3%)
Frame = -3
Query: 410 PRAGVVHRHVPGVASLPSRTS---YELVVGGVDGRYRHDAVLSVCDGRVLAQRHQVTHRL 240
P+ ++ RH+P V+SLP ++++ RH + SVC GR QR ++ L
Sbjct: 447 PQRMIISRHLPSVSSLPFHPQLHPQQMIIS------RH--LPSVCGGRFHPQRMIISRHL 498
Query: 239 AGQSFIIFR*QLLQREDRCSR 177
S + F QL ++ SR
Sbjct: 499 PSVSSLPFHPQLHPQQMIISR 519
>AK127130-1|BAC86842.1| 266|Homo sapiens protein ( Homo sapiens
cDNA FLJ45187 fis, clone BRAWH3048548. ).
Length = 266
Score = 29.5 bits (63), Expect = 8.9
Identities = 15/36 (41%), Positives = 16/36 (44%)
Frame = +1
Query: 364 RLATPGTWRCTTPARGSGAPTSRRSPQCRAR*PSTT 471
R P +C A SGAP S P CR R S T
Sbjct: 172 RTPAPAPAKCQCRASDSGAPASASLPACRRRPTSCT 207
>AK023667-1|BAB14631.1| 150|Homo sapiens protein ( Homo sapiens
cDNA FLJ13605 fis, clone PLACE1010562. ).
Length = 150
Score = 29.5 bits (63), Expect = 8.9
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = +1
Query: 175 YRLHRSSLCNSCYLKIMKLCP 237
Y LH + CYLK + LCP
Sbjct: 39 YSLHMYEMAEDCYLKTLSLCP 59
>AB209632-1|BAD92869.1| 854|Homo sapiens PI-3-kinase-related kinase
SMG-1 isoform 1homolog protein.
Length = 854
Score = 29.5 bits (63), Expect = 8.9
Identities = 24/81 (29%), Positives = 39/81 (48%), Gaps = 3/81 (3%)
Frame = -3
Query: 410 PRAGVVHRHVPGVASLPSRTS---YELVVGGVDGRYRHDAVLSVCDGRVLAQRHQVTHRL 240
P+ ++ RH+P V+SLP ++++ RH + SVC GR QR ++ L
Sbjct: 509 PQRMIISRHLPSVSSLPFHPQLHPQQMIIS------RH--LPSVCGGRFHPQRMIISRHL 560
Query: 239 AGQSFIIFR*QLLQREDRCSR 177
S + F QL ++ SR
Sbjct: 561 PSVSSLPFHPQLHPQQMIISR 581
>AB075865-1|BAB85571.1| 955|Homo sapiens KIAA1985 protein protein.
Length = 955
Score = 29.5 bits (63), Expect = 8.9
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = +1
Query: 175 YRLHRSSLCNSCYLKIMKLCP 237
Y LH + CYLK + LCP
Sbjct: 844 YSLHMYEMAEDCYLKTLSLCP 864
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 86,783,020
Number of Sequences: 237096
Number of extensions: 1893925
Number of successful extensions: 6501
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 6089
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6489
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5929224630
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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