Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0004_K10
         (558 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL132904-25|CAB81956.2|  434|Caenorhabditis elegans Hypothetical...    33   0.18 
U55854-2|AAA98011.2| 1427|Caenorhabditis elegans Phospholipase d...    30   0.98 
AB028889-1|BAA97571.1| 1427|Caenorhabditis elegans phospholipase...    30   0.98 
Z99281-46|CAB54455.3|  795|Caenorhabditis elegans Hypothetical p...    30   1.3  
Z77654-2|CAB01130.1|  308|Caenorhabditis elegans Hypothetical pr...    28   5.2  
U72208-1|AAD00182.1|  308|Caenorhabditis elegans inhibitor of ap...    28   5.2  
AC006777-3|AAK72309.1|  345|Caenorhabditis elegans Hypothetical ...    27   6.9  

>AL132904-25|CAB81956.2|  434|Caenorhabditis elegans Hypothetical
           protein Y111B2A.5a protein.
          Length = 434

 Score = 32.7 bits (71), Expect = 0.18
 Identities = 16/63 (25%), Positives = 37/63 (58%)
 Frame = +3

Query: 66  LVRNENTLKTNSDTFNSALKTYDRHFSLTEHFLFKALDRLSSTELKPEQILLDKLRPLED 245
           ++   NTL+   ++ ++A+KT  +     E  + +  ++L+ +ELK ++   +K++ LED
Sbjct: 153 MIAQTNTLQMQQESMSTAMKTLQKQILANEREICQLEEKLTESELKTQR-SEEKVKNLED 211

Query: 246 RIL 254
            I+
Sbjct: 212 FIV 214


>U55854-2|AAA98011.2| 1427|Caenorhabditis elegans Phospholipase d
            protein 1 protein.
          Length = 1427

 Score = 30.3 bits (65), Expect = 0.98
 Identities = 19/86 (22%), Positives = 38/86 (44%)
 Frame = +3

Query: 30   VRCSKDIADGNFLVRNENTLKTNSDTFNSALKTYDRHFSLTEHFLFKALDRLSSTELKPE 209
            V C   +AD  F+   ++T K+N   +    ++Y   F  T     K   ++  +E  P+
Sbjct: 1325 VSCDDPVADSFFVDVWQSTAKSNGQIYEEVFRSYPTDFVETFEEFQKWTSQIPMSEYSPQ 1384

Query: 210  QILLDKLRPLEDRILPLAADMLLAGV 287
            Q   +++R L+  ++    + L   V
Sbjct: 1385 Q-AEERVRDLKGVLVDFPLNFLCKAV 1409


>AB028889-1|BAA97571.1| 1427|Caenorhabditis elegans phospholipase D
            protein.
          Length = 1427

 Score = 30.3 bits (65), Expect = 0.98
 Identities = 19/86 (22%), Positives = 38/86 (44%)
 Frame = +3

Query: 30   VRCSKDIADGNFLVRNENTLKTNSDTFNSALKTYDRHFSLTEHFLFKALDRLSSTELKPE 209
            V C   +AD  F+   ++T K+N   +    ++Y   F  T     K   ++  +E  P+
Sbjct: 1325 VSCDDPVADSFFVDVWQSTAKSNGQIYEEVFRSYPTDFVETFEEFQKWTSQIPMSEYSPQ 1384

Query: 210  QILLDKLRPLEDRILPLAADMLLAGV 287
            Q   +++R L+  ++    + L   V
Sbjct: 1385 Q-AEERVRDLKGVLVDFPLNFLCKAV 1409


>Z99281-46|CAB54455.3|  795|Caenorhabditis elegans Hypothetical
           protein Y57G11C.32 protein.
          Length = 795

 Score = 29.9 bits (64), Expect = 1.3
 Identities = 23/84 (27%), Positives = 45/84 (53%), Gaps = 10/84 (11%)
 Frame = +3

Query: 183 LSSTELKPEQILLDKLR-----PLE-----DRILPLAADMLLAGVEPVSFYKYFIEKYTS 332
           + + +LKP  ILLD+++     P+E       +L +  D L   +E +S+  +F ++ TS
Sbjct: 63  IKNEDLKPSDILLDRIKVSSMLPVEYSPALPALLMVKCDSL---IEAISYVDHFDDRRTS 119

Query: 333 VIIIIC*DDLYLMHANVESIYKTM 404
           +I+ +  D ++     ++ I KTM
Sbjct: 120 IILRLLADSMHEKDLTIDFI-KTM 142


>Z77654-2|CAB01130.1|  308|Caenorhabditis elegans Hypothetical
           protein C50B8.2 protein.
          Length = 308

 Score = 27.9 bits (59), Expect = 5.2
 Identities = 16/53 (30%), Positives = 26/53 (49%)
 Frame = +3

Query: 45  DIADGNFLVRNENTLKTNSDTFNSALKTYDRHFSLTEHFLFKALDRLSSTELK 203
           DIA+ N + R + T K  S   +S L T+D   +  ++F+F     +  T  K
Sbjct: 139 DIANENPITRADATRKLISFRSSSKLLTFDHRLATFQNFIFDKKRNVKCTSKK 191


>U72208-1|AAD00182.1|  308|Caenorhabditis elegans inhibitor of
           apoptosis homolog protein.
          Length = 308

 Score = 27.9 bits (59), Expect = 5.2
 Identities = 16/53 (30%), Positives = 26/53 (49%)
 Frame = +3

Query: 45  DIADGNFLVRNENTLKTNSDTFNSALKTYDRHFSLTEHFLFKALDRLSSTELK 203
           DIA+ N + R + T K  S   +S L T+D   +  ++F+F     +  T  K
Sbjct: 139 DIANENPITRADATRKLISFRSSSKLLTFDHRLATFQNFIFDKKRNVKCTSKK 191


>AC006777-3|AAK72309.1|  345|Caenorhabditis elegans Hypothetical
           protein Y46H3D.6 protein.
          Length = 345

 Score = 27.5 bits (58), Expect = 6.9
 Identities = 16/50 (32%), Positives = 26/50 (52%)
 Frame = -3

Query: 235 GRNLSSNICSGFNSVELSLSRALKRKCSVKLKCLSYVFKALLKVSELVLR 86
           G+ LSS+ CSG   +E  + R L  KC  + KC+    +    +S L ++
Sbjct: 41  GKPLSSSRCSGSCKLENQVLRRLCAKCRYE-KCVQVGMRTSAVLSRLAVK 89


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,416,372
Number of Sequences: 27780
Number of extensions: 179103
Number of successful extensions: 469
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 464
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 469
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1144922904
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)