Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0004_K09
(595 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_01_0058 + 388989-389102,389226-389337,389457-389483,389787-38... 124 7e-29
09_06_0328 + 22365308-22365415,22365743-22366018,22366166-223664... 47 1e-05
03_02_0740 - 10836752-10837052,10837756-10837814,10837901-108384... 38 0.005
05_04_0278 - 19694590-19694757,19696331-19696391,19696503-196966... 36 0.024
01_06_0303 + 28324155-28325045,28326208-28326321 33 0.13
02_05_1227 - 35076047-35076217,35076737-35076797,35077038-350771... 33 0.23
09_02_0022 + 3065644-3065953,3066048-3067162,3067261-3067437,306... 32 0.30
06_03_0914 + 25920277-25920405,25920783-25920810,25920890-259209... 32 0.30
05_07_0039 - 27239362-27239478,27240570-27241463 31 0.69
04_04_0990 - 29955207-29955551,29955639-29955813,29955887-299560... 31 0.69
03_06_0767 + 36126254-36126264,36126676-36126769,36127068-361273... 31 0.69
10_01_0025 - 328105-328188,328281-328337,328680-328734,328809-32... 31 0.92
07_01_0950 + 7998616-7999728,7999821-7999970 31 0.92
07_03_1546 + 27602598-27602917,27602995-27603052,27603130-276032... 30 1.2
06_01_0504 + 3632108-3632281,3633532-3633699,3633797-3633883,363... 30 1.2
01_04_0062 - 15563978-15564616,15564687-15565604 30 1.2
05_01_0316 + 2476689-2477030,2477164-2477283,2477742-2477819,247... 30 1.6
10_08_0941 - 21717703-21718091,21718454-21718564,21718707-217187... 29 2.8
07_01_1005 + 8509777-8509968,8510059-8510205,8510326-8510544,851... 29 2.8
12_02_1046 + 25662715-25662884,25663163-25663757 29 3.7
09_04_0707 + 19645471-19646112 28 4.9
09_04_0259 - 16182190-16182360,16183185-16183262,16184431-161845... 28 4.9
09_03_0209 + 13505900-13506277,13507296-13508063,13508412-13509131 28 4.9
09_02_0135 - 4721645-4722277,4722952-4723014,4723361-4724287 28 4.9
03_05_0969 + 29283905-29284570,29284862-29284930,29286533-292866... 28 4.9
02_01_0640 + 4796079-4797032,4797269-4797934 28 4.9
08_02_1111 + 24377268-24377444,24377543-24377630,24378072-243781... 28 6.5
04_04_1462 - 33769122-33769151,33769385-33769426,33769571-337701... 28 6.5
02_05_0559 - 29953309-29953722,29953852-29953938,29954280-299543... 28 6.5
01_01_0166 + 1412918-1413309,1413845-1414006,1414534-1414720,141... 28 6.5
12_01_0612 - 5044639-5044858,5045010-5045167,5045440-5045684,504... 27 8.5
12_01_0049 + 417325-419068,419667-420307 27 8.5
11_01_0047 + 358370-360107,360713-361353 27 8.5
08_02_0897 - 22362136-22363698 27 8.5
>08_01_0058 +
388989-389102,389226-389337,389457-389483,389787-389859,
389958-390061,390144-390358,390429-390528,390739-390805,
391628-391716,391810-391948,392057-392157,392921-393088,
393302-393510
Length = 505
Score = 124 bits (298), Expect = 7e-29
Identities = 65/161 (40%), Positives = 90/161 (55%), Gaps = 1/161 (0%)
Frame = +2
Query: 107 RLRLYHDDTLQTFYRRLQFSPDGALVAVPAGRAEADQGKADVKPINAVYIYTRYSLKIPA 286
R L+HD+TL +F+RRL +SPDG+ + +PAG K + IN Y+ +R L PA
Sbjct: 219 RAHLFHDETLPSFFRRLAWSPDGSFLVLPAGLC-----KYSSEVINTAYVMSRRDLSRPA 273
Query: 287 CILPCGDSALVT-RWSPRQYRVRPGGPRAAFPTRSRMVLAVGTRRSVLIYDTQQKTPIAI 463
LP A+V R+ P +++R F R++ AV T S+ +YDT+ PI I
Sbjct: 274 IQLPGASKAIVAVRFCPVLFKLRGSQSDCFFKLPYRVIFAVATLNSLYVYDTESVAPILI 333
Query: 464 ISNIHYTRLTDLTWSPDGNTLIASSTDGFCTIITFANGELG 586
+ +HY +TD+ WS D L SS D FCTII F N ELG
Sbjct: 334 HAGLHYAAITDIAWSSDAKYLAVSSRDCFCTIIEFENEELG 374
>09_06_0328 +
22365308-22365415,22365743-22366018,22366166-22366417,
22366542-22366939,22367028-22368021,22368199-22368409,
22368515-22368749,22368874-22368996,22369190-22369310,
22369416-22369625
Length = 975
Score = 46.8 bits (106), Expect = 1e-05
Identities = 22/65 (33%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Frame = +2
Query: 395 VLAVGTR-RSVLIYDTQQKTPIAIISNIHYTRLTDLTWSPDGNTLIASSTDGFCTIITFA 571
V+A+G++ R++ ++ T P+ + + + DL+WSPDG +L A S DG F
Sbjct: 308 VIAIGSQDRTITVWTTASARPLFVAKHFFTQSVVDLSWSPDGYSLFACSLDGSVATFHFE 367
Query: 572 NGELG 586
ELG
Sbjct: 368 AKELG 372
Score = 34.3 bits (75), Expect = 0.074
Identities = 17/40 (42%), Positives = 21/40 (52%)
Frame = +2
Query: 476 HYTRLTDLTWSPDGNTLIASSTDGFCTIITFANGELGEVL 595
H + DL WSPD +TL + S D I + ANG VL
Sbjct: 124 HTADVVDLNWSPDDSTLASGSLDNTVHIWSMANGICTAVL 163
>03_02_0740 -
10836752-10837052,10837756-10837814,10837901-10838476,
10839965-10841686,10841776-10842173,10842264-10842318,
10842989-10843048,10843444-10843540,10844885-10844955,
10845029-10845109,10846054-10846124,10847951-10848119,
10848521-10848683,10848752-10848942,10849037-10849168
Length = 1381
Score = 38.3 bits (85), Expect = 0.005
Identities = 22/68 (32%), Positives = 33/68 (48%)
Frame = +2
Query: 377 PTRSRMVLAVGTRRSVLIYDTQQKTPIAIISNIHYTRLTDLTWSPDGNTLIASSTDGFCT 556
P R+ ++ G +I+D + P+ I H+ +L D +SPDG +LI S G
Sbjct: 250 PFNPRIAMSAGYDGKTIIWDIWEGKPVQIYETGHF-KLVDGKFSPDGTSLILSDEIGQIF 308
Query: 557 IITFANGE 580
II GE
Sbjct: 309 IIGTGQGE 316
>05_04_0278 -
19694590-19694757,19696331-19696391,19696503-19696658,
19696740-19696912,19698199-19698276,19698399-19698575,
19698924-19699001,19700573-19700692,19700803-19701183
Length = 463
Score = 35.9 bits (79), Expect = 0.024
Identities = 26/100 (26%), Positives = 41/100 (41%), Gaps = 1/100 (1%)
Frame = +2
Query: 251 YIYTRYSLKIPACILPCGDSALVTRWSPRQYRVRPGGPRA-AFPTRSRMVLAVGTRRSVL 427
Y Y+RY + P D ++ T W R + A+ T + + SV
Sbjct: 346 YRYSRYPQQYKQLKHP-HDQSIATYWGHSVLRTLIRCYFSPAYSTGQKYIYTGSYDSSVC 404
Query: 428 IYDTQQKTPIAIISNIHYTRLTDLTWSPDGNTLIASSTDG 547
IYD + +A + H + D +W P L++SS DG
Sbjct: 405 IYDVVSGSQVAKLKGYHQLAIRDCSWHPFDPMLVSSSWDG 444
>01_06_0303 + 28324155-28325045,28326208-28326321
Length = 334
Score = 33.5 bits (73), Expect = 0.13
Identities = 21/60 (35%), Positives = 28/60 (46%), Gaps = 6/60 (10%)
Frame = +2
Query: 386 SRMVLAVGTRRSVLIYDTQQK------TPIAIISNIHYTRLTDLTWSPDGNTLIASSTDG 547
+R L T+ S+ I+D + K P +S T L WS DG+TL A TDG
Sbjct: 261 NRYWLCAATQDSIKIWDLESKHIVQDLKPEIPVSKNQMLYCTSLNWSADGSTLYAGYTDG 320
>02_05_1227 -
35076047-35076217,35076737-35076797,35077038-35077123,
35077213-35077301,35077685-35077766,35078094-35078136,
35078211-35078284,35078492-35078561,35078747-35078816,
35079275-35079369,35079473-35079549,35080725-35080760
Length = 317
Score = 32.7 bits (71), Expect = 0.23
Identities = 17/70 (24%), Positives = 31/70 (44%), Gaps = 3/70 (4%)
Frame = +2
Query: 377 PTRSRMVLAVGTRRSVLIYDTQQKT--PIAIISNIHYTRLTDLTWSPDGNTLIASSTDGF 550
P ++ + G + + Y Q ++ H + +T + W P+ L +STDG
Sbjct: 68 PKENKFAVGSGAKSVCICYYEQDNNWWISKVVRKKHESSVTSVAWHPNNILLATTSTDGK 127
Query: 551 CTII-TFANG 577
C ++ TF G
Sbjct: 128 CRVLSTFIKG 137
>09_02_0022 +
3065644-3065953,3066048-3067162,3067261-3067437,
3067535-3067648,3068614-3068718,3068930-3069064,
3069148-3069203,3069277-3069382,3069515-3069631,
3069705-3069831,3069915-3070141,3070164-3070727
Length = 1050
Score = 32.3 bits (70), Expect = 0.30
Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Frame = +2
Query: 398 LAV-GTRRSVLIYDTQQKTPIAIISNIHYTRLTDLTWSPDGNTLIASSTD 544
LAV G R +V++YD + + H + L WSP+G L+ + D
Sbjct: 221 LAVPGLRNNVVMYDRDTGEEVFTLKGEHEQPVCSLCWSPNGRYLVTAGLD 270
>06_03_0914 +
25920277-25920405,25920783-25920810,25920890-25920990,
25921356-25921479,25921793-25921903,25922222-25922397,
25922766-25922848,25922935-25923007,25923630-25923695,
25923776-25923818,25924600-25924739,25924878-25925090,
25925397-25925481,25925558-25925852,25926855-25927110,
25927237-25927450,25927701-25927912,25928054-25928203
Length = 832
Score = 32.3 bits (70), Expect = 0.30
Identities = 18/61 (29%), Positives = 31/61 (50%)
Frame = +2
Query: 365 RAAFPTRSRMVLAVGTRRSVLIYDTQQKTPIAIISNIHYTRLTDLTWSPDGNTLIASSTD 544
+ A+ + ++ V ++++DT + H R+TDL +S DG LI+SS D
Sbjct: 450 KIAYHRANGLLATVADDMVLILFDTVAMKMVRRFEG-HTDRVTDLCFSEDGKWLISSSMD 508
Query: 545 G 547
G
Sbjct: 509 G 509
>05_07_0039 - 27239362-27239478,27240570-27241463
Length = 336
Score = 31.1 bits (67), Expect = 0.69
Identities = 23/62 (37%), Positives = 30/62 (48%), Gaps = 8/62 (12%)
Frame = +2
Query: 386 SRMVLAVGTRRSVLIYDTQQKTPI--------AIISNIHYTRLTDLTWSPDGNTLIASST 541
+R L T SV I+D + K + A S + Y T L+WS DG+TL A T
Sbjct: 262 NRYWLCAATEDSVKIWDLESKLVMQDLKPEVQAFKSQMLYC--TSLSWSADGSTLFAGYT 319
Query: 542 DG 547
DG
Sbjct: 320 DG 321
>04_04_0990 -
29955207-29955551,29955639-29955813,29955887-29956017,
29956317-29956436,29956908-29956984,29957070-29957316,
29957413-29957569,29958191-29958309,29958421-29958555,
29958636-29958921,29959009-29959211,29959732-29959881,
29960084-29960266,29960931-29961278
Length = 891
Score = 31.1 bits (67), Expect = 0.69
Identities = 15/53 (28%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Frame = +2
Query: 389 RMVLAVGTR-RSVLIYDTQQKTPIAIISNIHYTRLTDLTWSPDGNTLIASSTD 544
R++L G+ +V +++ + K +A++ H++ +T L S DG TL+++ D
Sbjct: 175 RLLLFSGSEDATVRVWNLESKKCVAVLKE-HFSAVTSLALSEDGQTLLSAGRD 226
>03_06_0767 +
36126254-36126264,36126676-36126769,36127068-36127315,
36127391-36127647,36127949-36127998,36128056-36128286,
36128851-36128928,36129315-36129441,36129520-36129629,
36130003-36130152,36131106-36131183,36131293-36131421,
36131502-36131699,36132199-36132342
Length = 634
Score = 31.1 bits (67), Expect = 0.69
Identities = 23/102 (22%), Positives = 45/102 (44%), Gaps = 1/102 (0%)
Frame = +2
Query: 242 NAVYIYTRYSLKIPACILPCGDSALVTRWSPRQYRVRPGGP-RAAFPTRSRMVLAVGTRR 418
NA+ I+TR + A + + + S + +++ GG R F + +LAV T
Sbjct: 449 NAIEIFTRNLQRFYALV-----TTMEKFVSGKLVKMKQGGTGRVRFQPQIGQLLAVATGS 503
Query: 419 SVLIYDTQQKTPIAIISNIHYTRLTDLTWSPDGNTLIASSTD 544
V I D +++ + + +H + + W G + + S D
Sbjct: 504 IVNIVDVEKEASLHSLPKVHTNEVNCICWDEKGERVASVSQD 545
Score = 27.9 bits (59), Expect = 6.5
Identities = 14/58 (24%), Positives = 27/58 (46%)
Frame = +2
Query: 374 FPTRSRMVLAVGTRRSVLIYDTQQKTPIAIISNIHYTRLTDLTWSPDGNTLIASSTDG 547
F T +++ + G + V +++ I H +TD+ + P+ L SS+DG
Sbjct: 387 FSTDGKLLASAGHEKKVFLWNMDNLNMDTKIEE-HTNFITDIRFKPNSTQLATSSSDG 443
>10_01_0025 -
328105-328188,328281-328337,328680-328734,328809-328951,
330772-330909,331010-331120,332621-332684,334179-334378,
334678-334805,335468-335593,335828-335917,336035-336116,
336845-336910
Length = 447
Score = 30.7 bits (66), Expect = 0.92
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = +2
Query: 419 SVLIYDTQQKTPIAIISNIHYTRLTDLTWSPDGNTLIASSTDG 547
+V +D +TP+ H + + WSPDGN L++ S G
Sbjct: 105 TVRFWDLSTQTPLFTCKG-HKNWVLCIAWSPDGNHLVSGSKSG 146
>07_01_0950 + 7998616-7999728,7999821-7999970
Length = 420
Score = 30.7 bits (66), Expect = 0.92
Identities = 19/37 (51%), Positives = 22/37 (59%), Gaps = 2/37 (5%)
Frame = +1
Query: 259 HKIFSENPRLHPSVRGLRPRDALVAAAVPGAP--WRP 363
H + PRL PS+R L + LVAAAVP AP W P
Sbjct: 183 HLELHDAPRL-PSLRSLTLQSVLVAAAVPFAPGKWCP 218
>07_03_1546 +
27602598-27602917,27602995-27603052,27603130-27603252,
27603896-27603992,27604095-27604131,27604244-27604349,
27604547-27604604,27604705-27604802,27604911-27605030,
27605622-27605667,27606336-27606522,27606747-27607263,
27607361-27607453,27608101-27608286,27608364-27608574,
27609263-27609387,27609518-27609664,27610114-27610236,
27610445-27610799,27611076-27611305,27611785-27611877
Length = 1109
Score = 30.3 bits (65), Expect = 1.2
Identities = 14/57 (24%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Frame = +2
Query: 377 PTRSRMVLAVGTRRSVLIYDTQQKTPIAIISNIHYTRLTDLTWSPDGNT-LIASSTD 544
P ++ + +++D + + P+ S+ + T+ + L W+PD +T LI +S D
Sbjct: 184 PKFQHILATASSNGMTVVWDLRNQKPLTSFSDSNRTKCSVLQWNPDMSTQLIVASDD 240
>06_01_0504 +
3632108-3632281,3633532-3633699,3633797-3633883,
3634766-3634876,3635114-3635205,3635288-3635393,
3635475-3635561,3637796-3638209
Length = 412
Score = 30.3 bits (65), Expect = 1.2
Identities = 14/58 (24%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Frame = +2
Query: 389 RMVLAVGTRRSVLIYDTQQ-KTPIAIISNIHYTRLTDLTWSPDGNTLIASSTDGFCTI 559
+++ VG R L+ D++ K ++ ++ Y+ + W PDG T + D C +
Sbjct: 255 KLLAVVGDDRDALLVDSRNGKVTSTLVGHLDYSFAS--AWHPDGRTFATGNQDKTCRV 310
>01_04_0062 - 15563978-15564616,15564687-15565604
Length = 518
Score = 30.3 bits (65), Expect = 1.2
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = +1
Query: 253 YLHKIFSENPRLHPSVRGLRPRDALVAAAVPG 348
YLH + E+ RLHP V L PR+ V G
Sbjct: 363 YLHLVIKESLRLHPPVTMLLPRECRETCRVMG 394
>05_01_0316 +
2476689-2477030,2477164-2477283,2477742-2477819,
2477956-2478132,2478317-2478394,2478694-2478866,
2478994-2479149,2479573-2479633,2479831-2480049
Length = 467
Score = 29.9 bits (64), Expect = 1.6
Identities = 17/59 (28%), Positives = 28/59 (47%)
Frame = +2
Query: 374 FPTRSRMVLAVGTRRSVLIYDTQQKTPIAIISNIHYTRLTDLTWSPDGNTLIASSTDGF 550
+ T R + + V IYD + +S H + + D TW P T+++SS DG+
Sbjct: 374 YSTGQRYIYTGSSDEYVYIYDVVTGDIVEKLS-WHGSIIRDCTWHPYNLTIVSSSWDGY 431
>10_08_0941 -
21717703-21718091,21718454-21718564,21718707-21718791,
21718885-21719106,21719804-21720292,21722206-21722322
Length = 470
Score = 29.1 bits (62), Expect = 2.8
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = +2
Query: 485 RLTDLTWSPDGNTLIASSTDGFC 553
R+ DL W+ DG L+ D FC
Sbjct: 424 RVVDLKWNSDGTCLLLKDRDSFC 446
>07_01_1005 +
8509777-8509968,8510059-8510205,8510326-8510544,
8510652-8510761,8511337-8511391,8511447-8511631,
8512537-8512599,8513713-8513782,8514159-8514242,
8515925-8516159,8516213-8516517
Length = 554
Score = 29.1 bits (62), Expect = 2.8
Identities = 11/40 (27%), Positives = 19/40 (47%)
Frame = +2
Query: 461 IISNIHYTRLTDLTWSPDGNTLIASSTDGFCTIITFANGE 580
++ + H + WSPDG L +S D I ++ G+
Sbjct: 66 VLEDTHNRTVRSCAWSPDGKLLATASFDSTTAIWEYSGGD 105
>12_02_1046 + 25662715-25662884,25663163-25663757
Length = 254
Score = 28.7 bits (61), Expect = 3.7
Identities = 15/42 (35%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Frame = -1
Query: 157 QPPVERLQRVVVVEPQPRLLQRVPAGKRQA-SLTAARNYLLR 35
+PPV +R +++ P PR + R PAG S++ R+ L R
Sbjct: 106 KPPVPEPERPLLLPPSPRRVSRPPAGTAATRSISPFRSGLAR 147
>09_04_0707 + 19645471-19646112
Length = 213
Score = 28.3 bits (60), Expect = 4.9
Identities = 13/17 (76%), Positives = 14/17 (82%), Gaps = 1/17 (5%)
Frame = +1
Query: 391 HGARRRDPALRAHL-RY 438
HGAR RD ALR+HL RY
Sbjct: 148 HGARERDAALRSHLSRY 164
>09_04_0259 -
16182190-16182360,16183185-16183262,16184431-16184586,
16184913-16185092,16185875-16186027
Length = 245
Score = 28.3 bits (60), Expect = 4.9
Identities = 21/56 (37%), Positives = 29/56 (51%)
Frame = +2
Query: 152 RLQFSPDGALVAVPAGRAEADQGKADVKPINAVYIYTRYSLKIPACILPCGDSALV 319
R+ SP ALVA+P+ A A +G+ + + V T S K + I P GD LV
Sbjct: 11 RVSVSPAAALVAMPSVAAAASRGRRGYRGL-VVRAATVVSPKYTS-IKPLGDRVLV 64
>09_03_0209 + 13505900-13506277,13507296-13508063,13508412-13509131
Length = 621
Score = 28.3 bits (60), Expect = 4.9
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = +3
Query: 399 SPSGPGAPCSFTIHNRRHPLP 461
S SG GA SF +H+ HP P
Sbjct: 38 SSSGAGAGASFQVHHASHPYP 58
>09_02_0135 - 4721645-4722277,4722952-4723014,4723361-4724287
Length = 540
Score = 28.3 bits (60), Expect = 4.9
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = +1
Query: 253 YLHKIFSENPRLHPSVRGLRPRDALVAAAVPG 348
Y+H I E R+HP V L PR + A+V G
Sbjct: 385 YIHAIMKETMRMHPVVPLLVPRMSREDASVAG 416
>03_05_0969 +
29283905-29284570,29284862-29284930,29286533-29286631,
29287016-29287324
Length = 380
Score = 28.3 bits (60), Expect = 4.9
Identities = 17/58 (29%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Frame = +2
Query: 374 FPTRSRMVLAVGTRRSVLIYDTQQ-KTPIAIISNIHYTRLTDLTWSPDGNTLIASSTD 544
F R++ + + + ++ T +P+A ++ H ++DL +SPDG LIAS++D
Sbjct: 27 FSPDGRLLASASADKLLRVWSTSDLASPVAELAG-HGEGVSDLAFSPDGR-LIASASD 82
Score = 27.9 bits (59), Expect = 6.5
Identities = 15/69 (21%), Positives = 32/69 (46%)
Frame = +2
Query: 371 AFPTRSRMVLAVGTRRSVLIYDTQQKTPIAIISNIHYTRLTDLTWSPDGNTLIASSTDGF 550
AF M+ + +V +++ + + ++ H +T + ++ DG +++ S DG
Sbjct: 120 AFSPHGNMLASGSFDETVRVWEVRSGRCLRVLP-AHSEPVTSVDFNRDGAMIVSGSYDGL 178
Query: 551 CTIITFANG 577
C I A G
Sbjct: 179 CRIWDSATG 187
>02_01_0640 + 4796079-4797032,4797269-4797934
Length = 539
Score = 28.3 bits (60), Expect = 4.9
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = +1
Query: 259 HKIFSENPRLHPSVRGLRPRDALVAAAVPGAPWR 360
H + + L+P+ R LRP A VA A GA WR
Sbjct: 104 HDLAFADRALNPTARRLRPGGAGVALAPYGALWR 137
>08_02_1111 +
24377268-24377444,24377543-24377630,24378072-24378157,
24378358-24378511,24378723-24378883,24378964-24379632,
24379860-24380058,24380188-24380405,24380578-24380755,
24380859-24381358
Length = 809
Score = 27.9 bits (59), Expect = 6.5
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +2
Query: 461 IISNIHYTRLTDLTWSPDGNTLIASSTD 544
I+ + H+ ++DLTWS G L++ S D
Sbjct: 417 IVPSGHFAPVSDLTWSRSGEYLLSVSHD 444
>04_04_1462 -
33769122-33769151,33769385-33769426,33769571-33770158,
33770398-33770508,33770585-33770625,33771238-33771382,
33771578-33771781,33772626-33772769,33772991-33773183,
33774559-33774602,33774694-33774822,33774907-33774954,
33775058-33775120,33775198-33775236,33776694-33776767,
33777460-33777518,33777709-33777768,33777920-33778044,
33778693-33778751,33779418-33779511,33779572-33779625,
33779775-33779813,33780423-33780602
Length = 854
Score = 27.9 bits (59), Expect = 6.5
Identities = 16/52 (30%), Positives = 20/52 (38%)
Frame = -2
Query: 447 FCCVS*MSTERRVPTASTMRLRVGNAALGPPGRTRYCRGDQRVTRAESPHGR 292
F V ST + + +L G R C GD+R A PHGR
Sbjct: 363 FLIVGSTSTSSSSSSRTRRKLAAGGLERAASSRPPCCCGDRRSRAAGDPHGR 414
>02_05_0559 -
29953309-29953722,29953852-29953938,29954280-29954385,
29954468-29954559,29955187-29955438
Length = 316
Score = 27.9 bits (59), Expect = 6.5
Identities = 19/69 (27%), Positives = 27/69 (39%)
Frame = +2
Query: 353 PGGPRAAFPTRSRMVLAVGTRRSVLIYDTQQKTPIAIISNIHYTRLTDLTWSPDGNTLIA 532
P A P R V+ +LI KT ++ + Y+ + WSPDG T
Sbjct: 148 PVNHTALSPDRKLAVIVGDDPNGLLIDANSGKTLHSLKGHFDYSFAS--AWSPDGRTFAT 205
Query: 533 SSTDGFCTI 559
+ D C I
Sbjct: 206 GNQDKTCRI 214
>01_01_0166 +
1412918-1413309,1413845-1414006,1414534-1414720,
1415221-1415646,1416028-1416036,1416361-1416768,
1417397-1417654
Length = 613
Score = 27.9 bits (59), Expect = 6.5
Identities = 15/57 (26%), Positives = 25/57 (43%)
Frame = +2
Query: 392 MVLAVGTRRSVLIYDTQQKTPIAIISNIHYTRLTDLTWSPDGNTLIASSTDGFCTII 562
M + R +++D + H R+ L WSPD N L+A+ + C I+
Sbjct: 509 MFASADANREAVVWDRATREIKLKNMLFHSARINCLAWSPD-NRLVATGSLDTCAIV 564
>12_01_0612 -
5044639-5044858,5045010-5045167,5045440-5045684,
5046006-5046294,5047540-5048561,5049320-5049389
Length = 667
Score = 27.5 bits (58), Expect = 8.5
Identities = 16/52 (30%), Positives = 19/52 (36%)
Frame = -2
Query: 441 CVS*MSTERRVPTASTMRLRVGNAALGPPGRTRYCRGDQRVTRAESPHGRMQ 286
C S+ A + R GN +L PPG R D R SP Q
Sbjct: 44 CAPCTSSNAAPKPAMAWQARSGNGSLHPPGNGRVQHSDHRPAARGSPRSLPQ 95
>12_01_0049 + 417325-419068,419667-420307
Length = 794
Score = 27.5 bits (58), Expect = 8.5
Identities = 27/91 (29%), Positives = 39/91 (42%), Gaps = 6/91 (6%)
Frame = +2
Query: 170 DGALVAVPAGRAEADQGKADVKPINAVYIYTRYSLKIP--ACIL-PCGDSALVTRWSPR- 337
DG+LVAV R + +G D + AV R+ +P A L P G+ LV + P
Sbjct: 515 DGSLVAVKRLREKITKGHKDFESEAAVLGKIRHPNLLPLRAYYLGPKGEKLLVLDFMPNG 574
Query: 338 --QYRVRPGGPRAAFPTRSRMVLAVGTRRSV 424
+ P +RM +A GT R +
Sbjct: 575 SLSQFLHARAPNTPISWETRMTIAKGTARGL 605
>11_01_0047 + 358370-360107,360713-361353
Length = 792
Score = 27.5 bits (58), Expect = 8.5
Identities = 27/91 (29%), Positives = 39/91 (42%), Gaps = 6/91 (6%)
Frame = +2
Query: 170 DGALVAVPAGRAEADQGKADVKPINAVYIYTRYSLKIP--ACIL-PCGDSALVTRWSPR- 337
DG+LVAV R + +G D + AV R+ +P A L P G+ LV + P
Sbjct: 513 DGSLVAVKRLREKITKGHKDFESEAAVLGKIRHPNLLPLRAYYLGPKGEKLLVLDFMPNG 572
Query: 338 --QYRVRPGGPRAAFPTRSRMVLAVGTRRSV 424
+ P +RM +A GT R +
Sbjct: 573 SLSQFLHARAPNTPISWETRMTIAKGTARGL 603
>08_02_0897 - 22362136-22363698
Length = 520
Score = 27.5 bits (58), Expect = 8.5
Identities = 16/32 (50%), Positives = 17/32 (53%)
Frame = +1
Query: 253 YLHKIFSENPRLHPSVRGLRPRDALVAAAVPG 348
YL I E R+HP V L PR A AAV G
Sbjct: 366 YLDAIMKETMRMHPIVPLLIPRVARDDAAVAG 397
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,367,122
Number of Sequences: 37544
Number of extensions: 330227
Number of successful extensions: 1223
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 1159
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1221
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1411925004
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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