Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0004_K09
(595 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC025726-36|AAL27268.1| 487|Caenorhabditis elegans Hypothetical... 91 5e-19
AC025726-35|AAL27267.1| 489|Caenorhabditis elegans Hypothetical... 91 5e-19
U23449-4|AAC24299.2| 534|Caenorhabditis elegans Hypothetical pr... 38 0.004
U23176-7|AAC46713.4| 454|Caenorhabditis elegans Hypothetical pr... 34 0.066
Z81490-1|CAB04014.1| 510|Caenorhabditis elegans Hypothetical pr... 31 0.47
AF330595-1|AAK00353.1| 510|Caenorhabditis elegans SMU-1 protein. 31 0.47
AL132904-13|CAC35846.4| 778|Caenorhabditis elegans Hypothetical... 30 1.1
Z81494-11|CAN99681.1| 455|Caenorhabditis elegans Hypothetical p... 30 1.4
Z81494-7|CAI79161.1| 387|Caenorhabditis elegans Hypothetical pr... 30 1.4
Z81494-6|CAC42275.1| 451|Caenorhabditis elegans Hypothetical pr... 30 1.4
Z73906-10|CAB54209.1| 530|Caenorhabditis elegans Hypothetical p... 30 1.4
Z73906-9|CAA98121.1| 571|Caenorhabditis elegans Hypothetical pr... 30 1.4
U21322-6|AAN65314.2| 669|Caenorhabditis elegans Hypothetical pr... 29 1.9
U21322-5|AAA62539.1| 1223|Caenorhabditis elegans Hypothetical pr... 29 1.9
AF016431-1|AAC24248.2| 311|Caenorhabditis elegans Hypothetical ... 29 2.5
U53340-3|AAA96208.1| 578|Caenorhabditis elegans Hypothetical pr... 29 3.3
Z81097-20|CAB03178.1| 417|Caenorhabditis elegans Hypothetical p... 28 4.4
AL023833-1|CAA19477.1| 417|Caenorhabditis elegans Hypothetical ... 28 4.4
AF116530-1|AAD05571.1| 417|Caenorhabditis elegans synthetic mul... 28 4.4
Z70035-1|CAA93861.1| 432|Caenorhabditis elegans Hypothetical pr... 28 5.8
Z37139-8|CAA85487.1| 376|Caenorhabditis elegans Hypothetical pr... 27 7.6
U97016-8|AAB52350.2| 779|Caenorhabditis elegans Hypothetical pr... 27 7.6
AC024867-3|AAK68601.2| 327|Caenorhabditis elegans Eukaryotic in... 27 7.6
AC024857-1|AAK31566.2| 869|Caenorhabditis elegans Temporarily a... 27 7.6
>AC025726-36|AAL27268.1| 487|Caenorhabditis elegans Hypothetical
protein Y71G12B.1b protein.
Length = 487
Score = 91.1 bits (216), Expect = 5e-19
Identities = 52/179 (29%), Positives = 86/179 (48%), Gaps = 4/179 (2%)
Frame = +2
Query: 71 LPFPRGHPLQEARL-RLYHDDTLQTFYRRLQFSPDGALVAVPAGRAEADQGKADVKPINA 247
+P G E ++ +L+HDD L +F R L FSP+G +A P E G +D +
Sbjct: 223 IPSANGDLHLETKIHKLFHDDQLFSFQRALGFSPNGEFIAAPCAHLEL--GSSD---LYG 277
Query: 248 VYIYTRYSLKI---PACILPCGDSALVTRWSPRQYRVRPGGPRAAFPTRSRMVLAVGTRR 418
Y + R L + P P + ++SP + + P R++ +
Sbjct: 278 TYFFRREDLGVKEAPYTFYPAPRPTFLVKFSPVTFSLLPSTKENHLGLPYRLLWIALNKD 337
Query: 419 SVLIYDTQQKTPIAIISNIHYTRLTDLTWSPDGNTLIASSTDGFCTIITFANGELGEVL 595
++ YD+Q P+A++ NIH LTD ++S DG L+ SS +GFC+ + + GEV+
Sbjct: 338 AIYFYDSQHSYPVAVVDNIHLNALTDASFSHDGRVLVVSSLEGFCSFVKINLTQWGEVM 396
>AC025726-35|AAL27267.1| 489|Caenorhabditis elegans Hypothetical
protein Y71G12B.1a protein.
Length = 489
Score = 91.1 bits (216), Expect = 5e-19
Identities = 52/179 (29%), Positives = 86/179 (48%), Gaps = 4/179 (2%)
Frame = +2
Query: 71 LPFPRGHPLQEARL-RLYHDDTLQTFYRRLQFSPDGALVAVPAGRAEADQGKADVKPINA 247
+P G E ++ +L+HDD L +F R L FSP+G +A P E G +D +
Sbjct: 225 IPSANGDLHLETKIHKLFHDDQLFSFQRALGFSPNGEFIAAPCAHLEL--GSSD---LYG 279
Query: 248 VYIYTRYSLKI---PACILPCGDSALVTRWSPRQYRVRPGGPRAAFPTRSRMVLAVGTRR 418
Y + R L + P P + ++SP + + P R++ +
Sbjct: 280 TYFFRREDLGVKEAPYTFYPAPRPTFLVKFSPVTFSLLPSTKENHLGLPYRLLWIALNKD 339
Query: 419 SVLIYDTQQKTPIAIISNIHYTRLTDLTWSPDGNTLIASSTDGFCTIITFANGELGEVL 595
++ YD+Q P+A++ NIH LTD ++S DG L+ SS +GFC+ + + GEV+
Sbjct: 340 AIYFYDSQHSYPVAVVDNIHLNALTDASFSHDGRVLVVSSLEGFCSFVKINLTQWGEVM 398
>U23449-4|AAC24299.2| 534|Caenorhabditis elegans Hypothetical
protein K06A1.5 protein.
Length = 534
Score = 38.3 bits (85), Expect = 0.004
Identities = 21/84 (25%), Positives = 37/84 (44%), Gaps = 2/84 (2%)
Frame = +2
Query: 314 LVTRWSPRQYRVRPGGPRAAFPTRSRMVLAVGTRRSVLIYDTQQKTPIAIISNIH--YTR 487
++ +S QY+ RA F + VLA + SV I++T+ ++ +
Sbjct: 449 IIHLYSAEQYKTSCDSTRAIFSSTGEYVLAGSSNSSVFIWNTKTTKLEKVVKTARSDSAQ 508
Query: 488 LTDLTWSPDGNTLIASSTDGFCTI 559
+ L W+P G L+A CT+
Sbjct: 509 IMSLAWNPSGRGLLACDRQKTCTL 532
>U23176-7|AAC46713.4| 454|Caenorhabditis elegans Hypothetical
protein F21H12.1 protein.
Length = 454
Score = 34.3 bits (75), Expect = 0.066
Identities = 23/64 (35%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
Frame = +2
Query: 395 VLAVG-TRRSVLIYDTQQKTPIAIISNIHYTRLTDLTWSPDGNTLIASSTDGFCTIITFA 571
++AVG T VLIYD + IA + H ++ L+WS DG L+ SS D +
Sbjct: 39 IVAVGCTDGRVLIYDFMTRN-IARTFSAHCLPVSCLSWSRDGRKLLTSSADNSIAMFDVL 97
Query: 572 NGEL 583
G L
Sbjct: 98 AGTL 101
>Z81490-1|CAB04014.1| 510|Caenorhabditis elegans Hypothetical
protein CC4.3 protein.
Length = 510
Score = 31.5 bits (68), Expect = 0.47
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = +2
Query: 503 WSPDGNTLIASSTDGFCTIITFANGEL 583
+SPD N L++ S DGF + + NG+L
Sbjct: 222 FSPDANYLVSGSKDGFIEVWNYMNGKL 248
Score = 29.9 bits (64), Expect = 1.4
Identities = 13/35 (37%), Positives = 22/35 (62%)
Frame = +2
Query: 476 HYTRLTDLTWSPDGNTLIASSTDGFCTIITFANGE 580
H + +TD+ +S +GN +I+ STDG + +GE
Sbjct: 348 HSSYITDVRYSDEGNHIISCSTDGSIRVWHGKSGE 382
>AF330595-1|AAK00353.1| 510|Caenorhabditis elegans SMU-1 protein.
Length = 510
Score = 31.5 bits (68), Expect = 0.47
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = +2
Query: 503 WSPDGNTLIASSTDGFCTIITFANGEL 583
+SPD N L++ S DGF + + NG+L
Sbjct: 222 FSPDANYLVSGSKDGFIEVWNYMNGKL 248
Score = 29.9 bits (64), Expect = 1.4
Identities = 13/35 (37%), Positives = 22/35 (62%)
Frame = +2
Query: 476 HYTRLTDLTWSPDGNTLIASSTDGFCTIITFANGE 580
H + +TD+ +S +GN +I+ STDG + +GE
Sbjct: 348 HSSYITDVRYSDEGNHIISCSTDGSIRVWHGKSGE 382
>AL132904-13|CAC35846.4| 778|Caenorhabditis elegans Hypothetical
protein Y111B2A.17 protein.
Length = 778
Score = 30.3 bits (65), Expect = 1.1
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = +2
Query: 476 HYTRLTDLTWSPDGNTLIASSTDGFCTIITFANGEL 583
H +T + W+P G L+ S D + T NGE+
Sbjct: 607 HQLTVTQIAWNPSGTRLLTVSRDRTAKLYTEKNGEV 642
>Z81494-11|CAN99681.1| 455|Caenorhabditis elegans Hypothetical
protein F02E9.10c protein.
Length = 455
Score = 29.9 bits (64), Expect = 1.4
Identities = 13/46 (28%), Positives = 24/46 (52%)
Frame = +2
Query: 422 VLIYDTQQKTPIAIISNIHYTRLTDLTWSPDGNTLIASSTDGFCTI 559
+ I+ + TPI I+N H + ++ L++SP L++ D I
Sbjct: 278 IFIWHIEMTTPIMSITNEHTSTISALSFSPTSRHLLSGGDDAMILI 323
>Z81494-7|CAI79161.1| 387|Caenorhabditis elegans Hypothetical
protein F02E9.10b protein.
Length = 387
Score = 29.9 bits (64), Expect = 1.4
Identities = 13/46 (28%), Positives = 24/46 (52%)
Frame = +2
Query: 422 VLIYDTQQKTPIAIISNIHYTRLTDLTWSPDGNTLIASSTDGFCTI 559
+ I+ + TPI I+N H + ++ L++SP L++ D I
Sbjct: 214 IFIWHIEMTTPIMSITNEHTSTISALSFSPTSRHLLSGGDDAMILI 259
>Z81494-6|CAC42275.1| 451|Caenorhabditis elegans Hypothetical
protein F02E9.10a protein.
Length = 451
Score = 29.9 bits (64), Expect = 1.4
Identities = 13/46 (28%), Positives = 24/46 (52%)
Frame = +2
Query: 422 VLIYDTQQKTPIAIISNIHYTRLTDLTWSPDGNTLIASSTDGFCTI 559
+ I+ + TPI I+N H + ++ L++SP L++ D I
Sbjct: 278 IFIWHIEMTTPIMSITNEHTSTISALSFSPTSRHLLSGGDDAMILI 323
>Z73906-10|CAB54209.1| 530|Caenorhabditis elegans Hypothetical
protein D2030.9b protein.
Length = 530
Score = 29.9 bits (64), Expect = 1.4
Identities = 19/78 (24%), Positives = 34/78 (43%), Gaps = 5/78 (6%)
Frame = +2
Query: 326 WSPRQYRVRPGGPRAA-----FPTRSRMVLAVGTRRSVLIYDTQQKTPIAIISNIHYTRL 490
W P PG A F S ++ ++ S+ ++D +Q+ I I N H +
Sbjct: 214 WFPIDLNGEPGRDHCAVFCVKFSDSSEQIVCGTSQYSIHVFDVEQRRRIRTIVNAHEDDV 273
Query: 491 TDLTWSPDGNTLIASSTD 544
+ ++ G+ LI S+ D
Sbjct: 274 NSVCFADLGSNLIYSAGD 291
>Z73906-9|CAA98121.1| 571|Caenorhabditis elegans Hypothetical
protein D2030.9a protein.
Length = 571
Score = 29.9 bits (64), Expect = 1.4
Identities = 19/78 (24%), Positives = 34/78 (43%), Gaps = 5/78 (6%)
Frame = +2
Query: 326 WSPRQYRVRPGGPRAA-----FPTRSRMVLAVGTRRSVLIYDTQQKTPIAIISNIHYTRL 490
W P PG A F S ++ ++ S+ ++D +Q+ I I N H +
Sbjct: 255 WFPIDLNGEPGRDHCAVFCVKFSDSSEQIVCGTSQYSIHVFDVEQRRRIRTIVNAHEDDV 314
Query: 491 TDLTWSPDGNTLIASSTD 544
+ ++ G+ LI S+ D
Sbjct: 315 NSVCFADLGSNLIYSAGD 332
>U21322-6|AAN65314.2| 669|Caenorhabditis elegans Hypothetical
protein K10D2.1b protein.
Length = 669
Score = 29.5 bits (63), Expect = 1.9
Identities = 13/21 (61%), Positives = 14/21 (66%)
Frame = +2
Query: 467 SNIHYTRLTDLTWSPDGNTLI 529
SNI T LT L WSPDG L+
Sbjct: 220 SNIEETMLTRLDWSPDGKYLM 240
>U21322-5|AAA62539.1| 1223|Caenorhabditis elegans Hypothetical
protein K10D2.1a protein.
Length = 1223
Score = 29.5 bits (63), Expect = 1.9
Identities = 13/21 (61%), Positives = 14/21 (66%)
Frame = +2
Query: 467 SNIHYTRLTDLTWSPDGNTLI 529
SNI T LT L WSPDG L+
Sbjct: 508 SNIEETMLTRLDWSPDGKYLM 528
>AF016431-1|AAC24248.2| 311|Caenorhabditis elegans Hypothetical
protein C10B5.1 protein.
Length = 311
Score = 29.1 bits (62), Expect = 2.5
Identities = 13/60 (21%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
Frame = +2
Query: 371 AFPTRSRMVLAVGTRRSVLIYDTQQKTPIAIISNIHYTRLTDLTWSP--DGNTLIASSTD 544
+F S+ ++A S+ ++ + + ++N H + ++ + W P G +IA+S+D
Sbjct: 243 SFSPNSKQIIAGFWDGSIRVFSRHRLNVLLALTNAHSSTISSIIWLPPEQGEIVIATSSD 302
>U53340-3|AAA96208.1| 578|Caenorhabditis elegans Hypothetical
protein F02E8.5 protein.
Length = 578
Score = 28.7 bits (61), Expect = 3.3
Identities = 19/79 (24%), Positives = 34/79 (43%), Gaps = 1/79 (1%)
Frame = +2
Query: 326 WSPRQYRVRPGGPRAAFPTRSRMVLAVGTRRSVLIYDTQQ-KTPIAIISNIHYTRLTDLT 502
+S YR R + + V A + S+ +++ K + SN + L+
Sbjct: 499 YSAENYRTSSDLSRVVLSSGNEYVAAGSSNGSIFVWNRNSTKLEKQLCSNSE-NAIFSLS 557
Query: 503 WSPDGNTLIASSTDGFCTI 559
W+P G L++SS F T+
Sbjct: 558 WNPTGYGLLSSSKQKFVTL 576
>Z81097-20|CAB03178.1| 417|Caenorhabditis elegans Hypothetical
protein K07A1.12 protein.
Length = 417
Score = 28.3 bits (60), Expect = 4.4
Identities = 16/57 (28%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Frame = +2
Query: 371 AFPTRSRMVLAVGTR-RSVLIYDTQQKTPIAIISNIHYTRLTDLTWSPDGNTLIASS 538
AF S +LA G+ ++V ++D + H + + WSP T++ASS
Sbjct: 272 AFNPYSEFILATGSADKTVALWDLRNLRMKLHSFESHRDEIFQVQWSPHNETILASS 328
>AL023833-1|CAA19477.1| 417|Caenorhabditis elegans Hypothetical
protein K07A1.12 protein.
Length = 417
Score = 28.3 bits (60), Expect = 4.4
Identities = 16/57 (28%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Frame = +2
Query: 371 AFPTRSRMVLAVGTR-RSVLIYDTQQKTPIAIISNIHYTRLTDLTWSPDGNTLIASS 538
AF S +LA G+ ++V ++D + H + + WSP T++ASS
Sbjct: 272 AFNPYSEFILATGSADKTVALWDLRNLRMKLHSFESHRDEIFQVQWSPHNETILASS 328
>AF116530-1|AAD05571.1| 417|Caenorhabditis elegans synthetic
multivulva protein LIN-53 p48 protein.
Length = 417
Score = 28.3 bits (60), Expect = 4.4
Identities = 16/57 (28%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Frame = +2
Query: 371 AFPTRSRMVLAVGTR-RSVLIYDTQQKTPIAIISNIHYTRLTDLTWSPDGNTLIASS 538
AF S +LA G+ ++V ++D + H + + WSP T++ASS
Sbjct: 272 AFNPYSEFILATGSADKTVALWDLRNLRMKLHSFESHRDEIFQVQWSPHNETILASS 328
>Z70035-1|CAA93861.1| 432|Caenorhabditis elegans Hypothetical
protein R09D1.1 protein.
Length = 432
Score = 27.9 bits (59), Expect = 5.8
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = +3
Query: 393 WCSPSGPGAPCSFTIHNRRH 452
W +P+GP AP ++ I R+H
Sbjct: 258 WGTPTGPSAPMNYNIGPRKH 277
>Z37139-8|CAA85487.1| 376|Caenorhabditis elegans Hypothetical
protein C14B1.4 protein.
Length = 376
Score = 27.5 bits (58), Expect = 7.6
Identities = 18/69 (26%), Positives = 35/69 (50%)
Frame = +2
Query: 374 FPTRSRMVLAVGTRRSVLIYDTQQKTPIAIISNIHYTRLTDLTWSPDGNTLIASSTDGFC 553
F +S +V++ SV I+D + I + H ++ ++++ DG+ + + S DG
Sbjct: 179 FNPQSSLVVSGSFDESVRIWDVKTGMCIKTLP-AHSDPVSAVSFNRDGSLIASGSYDGLV 237
Query: 554 TIITFANGE 580
I ANG+
Sbjct: 238 RIWDTANGQ 246
>U97016-8|AAB52350.2| 779|Caenorhabditis elegans Hypothetical
protein B0261.1 protein.
Length = 779
Score = 27.5 bits (58), Expect = 7.6
Identities = 17/50 (34%), Positives = 21/50 (42%)
Frame = -1
Query: 163 ELQPPVERLQRVVVVEPQPRLLQRVPAGKRQASLTAARNYLLRTHFKYSK 14
E P VE V +PR+L+ V Q SLT A + H SK
Sbjct: 23 EPAPVVEETLPQAPVVAEPRILENVETMTNQVSLTVASESMKSLHVDTSK 72
>AC024867-3|AAK68601.2| 327|Caenorhabditis elegans Eukaryotic
initiation factor protein3.I protein.
Length = 327
Score = 27.5 bits (58), Expect = 7.6
Identities = 15/39 (38%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = +2
Query: 431 YDTQQK-TPIAIISNIHYTRLTDLTWSPDGNTLIASSTD 544
YD + TPI ++H + DL SP G+ LI++S D
Sbjct: 173 YDLRNPDTPIHTNESVHRYSVQDLQLSPRGDFLISASRD 211
>AC024857-1|AAK31566.2| 869|Caenorhabditis elegans Temporarily
assigned gene nameprotein 305 protein.
Length = 869
Score = 27.5 bits (58), Expect = 7.6
Identities = 12/32 (37%), Positives = 20/32 (62%)
Frame = +2
Query: 485 RLTDLTWSPDGNTLIASSTDGFCTIITFANGE 580
+++DL+WSP G + + D F +I ANG+
Sbjct: 114 KVSDLSWSPCGGSALICYDDNF-VLIGSANGQ 144
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,087,881
Number of Sequences: 27780
Number of extensions: 243402
Number of successful extensions: 819
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 755
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 816
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1258229602
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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