Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0004_K08
         (510 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855501-1|ABH88188.1|  146|Tribolium castaneum chemosensory pro...    22   2.8  
AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.        21   8.4  
AF264718-1|AAF75271.1|  125|Tribolium castaneum putative cytochr...    21   8.4  

>DQ855501-1|ABH88188.1|  146|Tribolium castaneum chemosensory
           protein 15 protein.
          Length = 146

 Score = 22.2 bits (45), Expect = 2.8
 Identities = 13/46 (28%), Positives = 23/46 (50%)
 Frame = +3

Query: 126 FTLSAIVYGPLKPKPEKFSDKEGCYISELDTVLPYNQTLPSKMDCM 263
           F +  +V+G L       S  E   + E+DT+L  +Q   + +DC+
Sbjct: 3   FKIHFLVFGALLTY---VSSVEYLILREIDTILKNDQMTRNYLDCV 45


>AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.
          Length = 556

 Score = 20.6 bits (41), Expect = 8.4
 Identities = 6/15 (40%), Positives = 8/15 (53%)
 Frame = +3

Query: 153 PLKPKPEKFSDKEGC 197
           P +P P     +EGC
Sbjct: 126 PFRPHPHNLVGREGC 140


>AF264718-1|AAF75271.1|  125|Tribolium castaneum putative cytochrome
           P450 monooxigenaseCYP4Q6 protein.
          Length = 125

 Score = 20.6 bits (41), Expect = 8.4
 Identities = 7/18 (38%), Positives = 13/18 (72%)
 Frame = +2

Query: 68  IFVIYQNVQVYCALSRFD 121
           IF +++N ++Y  L +FD
Sbjct: 90  IFDLHRNAEIYPDLLKFD 107


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 108,915
Number of Sequences: 336
Number of extensions: 2276
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12154132
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)