Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0004_K08
         (510 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF291654-1|AAG00600.1| 1340|Anopheles gambiae thioester-containi...    23   6.0  
AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         23   7.9  

>AF291654-1|AAG00600.1| 1340|Anopheles gambiae thioester-containing
           protein I protein.
          Length = 1340

 Score = 23.0 bits (47), Expect = 6.0
 Identities = 14/46 (30%), Positives = 22/46 (47%)
 Frame = -3

Query: 454 RVGYIFNCIQRAFEVSFTPVRGQLIRVQHSG*GFSLSSTALHGGKI 317
           R G  F C  +      TP +G   +V+ S  GF  ++T+ + G I
Sbjct: 340 RPGLPFKCALQFTHHDGTPAKGITGKVEVSDVGFETTTTSDNDGLI 385


>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 22.6 bits (46), Expect = 7.9
 Identities = 15/52 (28%), Positives = 26/52 (50%)
 Frame = +2

Query: 257 LYGVSVRPDIYSLRHMWRCSDLTSM*SGGRQGETLPGVLYANQLSSYRRKRY 412
           L  V  R +  +L+H  +  D  S   GG  G   P   + ++ +++RRKR+
Sbjct: 475 LASVRKRTERLNLKH--KVVDNASAEGGGTLGVQSPRHGHESRANNFRRKRF 524


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 472,920
Number of Sequences: 2352
Number of extensions: 9955
Number of successful extensions: 18
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 46091631
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)