Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0004_K06
(555 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AM292340-1|CAL23152.1| 355|Tribolium castaneum gustatory recept... 22 0.44
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad... 23 1.8
AY362543-1|AAQ63455.1| 677|Tribolium castaneum chitin synthase ... 23 2.4
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ... 23 2.4
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ... 23 2.4
AM292349-1|CAL23161.1| 248|Tribolium castaneum gustatory recept... 22 4.1
AM292323-1|CAL23135.2| 587|Tribolium castaneum gustatory recept... 22 4.1
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept... 21 5.5
AM292362-1|CAL23174.2| 398|Tribolium castaneum gustatory recept... 21 5.5
EU019711-1|ABU25223.1| 534|Tribolium castaneum chitin deacetyla... 21 7.2
>AM292340-1|CAL23152.1| 355|Tribolium castaneum gustatory receptor
candidate 19 protein.
Length = 355
Score = 22.2 bits (45), Expect(2) = 0.44
Identities = 8/19 (42%), Positives = 12/19 (63%)
Frame = -3
Query: 58 YFYYSFLSNTPSFLYLTLV 2
YFYY+F+ T L+L +
Sbjct: 115 YFYYAFIIFTVHLLFLLCI 133
Score = 21.0 bits (42), Expect(2) = 0.44
Identities = 8/24 (33%), Positives = 14/24 (58%)
Frame = -3
Query: 109 WHCE*IMKTKRQFVYKQYFYYSFL 38
++C I+ T + YFYY+F+
Sbjct: 85 FYCPFIIFTVHFLLCTYYFYYAFI 108
Score = 21.0 bits (42), Expect = 7.2
Identities = 8/19 (42%), Positives = 11/19 (57%)
Frame = -3
Query: 58 YFYYSFLSNTPSFLYLTLV 2
YFYY+F+ T L L +
Sbjct: 240 YFYYAFILFTVHLLLLVCI 258
>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
adhesion molecule splicevariant 3.12.3.1 protein.
Length = 1639
Score = 23.0 bits (47), Expect = 1.8
Identities = 20/103 (19%), Positives = 44/103 (42%), Gaps = 2/103 (1%)
Frame = +3
Query: 225 LPTHKVHGKSISNWELMEKLRKMAQPDNFSVLKVSKQSFEVIRFEAELECRDKLARVLAK 404
LP ++ I+ ++E + + + + + + Q + LE + + +
Sbjct: 551 LPINRKQKVFINGTLIIENVERASDQATYDCVAKNSQGYSA---RGSLEVQVMVPPQILP 607
Query: 405 LDGRVVQLNDYPDALKVRVTENKCDFPTHHSW--DSFFRDATD 527
D +N+ D + V+ T +K D+P + SW + F D T+
Sbjct: 608 FDFGEDSINE-GDGVSVQCTVSKGDYPLNISWTLNGHFIDQTN 649
>AY362543-1|AAQ63455.1| 677|Tribolium castaneum chitin synthase
protein.
Length = 677
Score = 22.6 bits (46), Expect = 2.4
Identities = 7/18 (38%), Positives = 14/18 (77%)
Frame = -3
Query: 88 KTKRQFVYKQYFYYSFLS 35
K+K++F + YF Y+F++
Sbjct: 43 KSKKEFKTRTYFIYAFVA 60
>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
protein.
Length = 1464
Score = 22.6 bits (46), Expect = 2.4
Identities = 7/18 (38%), Positives = 14/18 (77%)
Frame = -3
Query: 88 KTKRQFVYKQYFYYSFLS 35
K+K++F + YF Y+F++
Sbjct: 276 KSKKEFKTRTYFIYAFVA 293
>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
CHS2 protein.
Length = 1464
Score = 22.6 bits (46), Expect = 2.4
Identities = 7/18 (38%), Positives = 14/18 (77%)
Frame = -3
Query: 88 KTKRQFVYKQYFYYSFLS 35
K+K++F + YF Y+F++
Sbjct: 276 KSKKEFKTRTYFIYAFVA 293
>AM292349-1|CAL23161.1| 248|Tribolium castaneum gustatory receptor
candidate 28 protein.
Length = 248
Score = 21.8 bits (44), Expect = 4.1
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = -3
Query: 241 TLCVGSEIYFKVSFHFLVEII 179
TL G E+YF+V+F + +I
Sbjct: 214 TLYSGDEMYFRVAFPSVFTLI 234
>AM292323-1|CAL23135.2| 587|Tribolium castaneum gustatory receptor
candidate 2 protein.
Length = 587
Score = 21.8 bits (44), Expect = 4.1
Identities = 6/17 (35%), Positives = 12/17 (70%)
Frame = +1
Query: 469 INVIFPHTIHGIRSFAM 519
+NV FPH +G+ +++
Sbjct: 502 VNVTFPHLFNGLVDYSL 518
>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
candidate 46 protein.
Length = 1451
Score = 21.4 bits (43), Expect = 5.5
Identities = 9/31 (29%), Positives = 18/31 (58%)
Frame = +3
Query: 255 ISNWELMEKLRKMAQPDNFSVLKVSKQSFEV 347
I+ W+ +E +RK+ + D V +KQ ++
Sbjct: 460 INRWKFIEFIRKVLEFDVKCVSNYTKQQSKI 490
>AM292362-1|CAL23174.2| 398|Tribolium castaneum gustatory receptor
candidate 41 protein.
Length = 398
Score = 21.4 bits (43), Expect = 5.5
Identities = 7/19 (36%), Positives = 10/19 (52%)
Frame = +1
Query: 262 IGNLWRNYEKWPNLTTFLF 318
I N W + + N + FLF
Sbjct: 60 IFNKWNQFRSYSNFSVFLF 78
>EU019711-1|ABU25223.1| 534|Tribolium castaneum chitin deacetylase
1 protein.
Length = 534
Score = 21.0 bits (42), Expect = 7.2
Identities = 7/14 (50%), Positives = 10/14 (71%)
Frame = -3
Query: 58 YFYYSFLSNTPSFL 17
YF+ ++L N P FL
Sbjct: 423 YFHAAWLKNNPEFL 436
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 130,039
Number of Sequences: 336
Number of extensions: 2690
Number of successful extensions: 12
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13725787
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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