Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0004_K06
         (555 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M99578-1|AAA36187.1|  550|Homo sapiens protein ( Human lymphocyt...   132   1e-30
L03426-2|AAA61303.1|  385|Homo sapiens XE7 protein.                   132   1e-30
L03426-1|AAA61304.1|  695|Homo sapiens XE7 protein.                   132   1e-30
BC110497-1|AAI10498.1|  695|Homo sapiens splicing factor, argini...   132   1e-30
BC110496-1|AAI10497.1|  695|Homo sapiens splicing factor, argini...   132   1e-30
BC028151-1|AAH28151.1|  446|Homo sapiens SFRS17A protein protein.     132   1e-30
BC016935-1|AAH16935.1|  292|Homo sapiens Unknown (protein for IM...   132   1e-30
AL683807-2|CAI41501.1|  695|Homo sapiens chromosome X and Y open...   132   1e-30
AL683807-1|CAI41499.1|  446|Homo sapiens chromosome X and Y open...   132   1e-30

>M99578-1|AAA36187.1|  550|Homo sapiens protein ( Human lymphocyte
           surface protein exons 1-5, complete cds. ).
          Length = 550

 Score =  132 bits (318), Expect = 1e-30
 Identities = 62/118 (52%), Positives = 82/118 (69%)
 Frame = +3

Query: 201 KLTLKYISLPTHKVHGKSISNWELMEKLRKMAQPDNFSVLKVSKQSFEVIRFEAELECRD 380
           K+T+  ++LP  K  GKSISNWE+ME+L+ M Q   FS L++SK + + IRFE E+E + 
Sbjct: 29  KMTIS-VALPQLKQPGKSISNWEVMERLKGMVQNHQFSTLRISKSTMDFIRFEGEVENKS 87

Query: 381 KLARVLAKLDGRVVQLNDYPDALKVRVTENKCDFPTHHSWDSFFRDATDMDEMKPGER 554
            +   LA LDG+ ++L+ + D LKVR  E K DFPT H WDSFFRDA DM+E  PGER
Sbjct: 88  LVKSFLACLDGKTIKLSGFSDILKVRAAEFKIDFPTRHDWDSFFRDAKDMNETLPGER 145


>L03426-2|AAA61303.1|  385|Homo sapiens XE7 protein.
          Length = 385

 Score =  132 bits (318), Expect = 1e-30
 Identities = 62/118 (52%), Positives = 82/118 (69%)
 Frame = +3

Query: 201 KLTLKYISLPTHKVHGKSISNWELMEKLRKMAQPDNFSVLKVSKQSFEVIRFEAELECRD 380
           K+T+  ++LP  K  GKSISNWE+ME+L+ M Q   FS L++SK + + IRFE E+E + 
Sbjct: 29  KMTIS-VALPQLKQPGKSISNWEVMERLKGMVQNHQFSTLRISKSTMDFIRFEGEVENKS 87

Query: 381 KLARVLAKLDGRVVQLNDYPDALKVRVTENKCDFPTHHSWDSFFRDATDMDEMKPGER 554
            +   LA LDG+ ++L+ + D LKVR  E K DFPT H WDSFFRDA DM+E  PGER
Sbjct: 88  LVKSFLACLDGKTIKLSGFSDILKVRAAEFKIDFPTRHDWDSFFRDAKDMNETLPGER 145


>L03426-1|AAA61304.1|  695|Homo sapiens XE7 protein.
          Length = 695

 Score =  132 bits (318), Expect = 1e-30
 Identities = 62/118 (52%), Positives = 82/118 (69%)
 Frame = +3

Query: 201 KLTLKYISLPTHKVHGKSISNWELMEKLRKMAQPDNFSVLKVSKQSFEVIRFEAELECRD 380
           K+T+  ++LP  K  GKSISNWE+ME+L+ M Q   FS L++SK + + IRFE E+E + 
Sbjct: 29  KMTIS-VALPQLKQPGKSISNWEVMERLKGMVQNHQFSTLRISKSTMDFIRFEGEVENKS 87

Query: 381 KLARVLAKLDGRVVQLNDYPDALKVRVTENKCDFPTHHSWDSFFRDATDMDEMKPGER 554
            +   LA LDG+ ++L+ + D LKVR  E K DFPT H WDSFFRDA DM+E  PGER
Sbjct: 88  LVKSFLACLDGKTIKLSGFSDILKVRAAEFKIDFPTRHDWDSFFRDAKDMNETLPGER 145


>BC110497-1|AAI10498.1|  695|Homo sapiens splicing factor,
           arginine/serine-rich 17A protein.
          Length = 695

 Score =  132 bits (318), Expect = 1e-30
 Identities = 62/118 (52%), Positives = 82/118 (69%)
 Frame = +3

Query: 201 KLTLKYISLPTHKVHGKSISNWELMEKLRKMAQPDNFSVLKVSKQSFEVIRFEAELECRD 380
           K+T+  ++LP  K  GKSISNWE+ME+L+ M Q   FS L++SK + + IRFE E+E + 
Sbjct: 29  KMTIS-VALPQLKQPGKSISNWEVMERLKGMVQNHQFSTLRISKSTMDFIRFEGEVENKS 87

Query: 381 KLARVLAKLDGRVVQLNDYPDALKVRVTENKCDFPTHHSWDSFFRDATDMDEMKPGER 554
            +   LA LDG+ ++L+ + D LKVR  E K DFPT H WDSFFRDA DM+E  PGER
Sbjct: 88  LVKSFLACLDGKTIKLSGFSDILKVRAAEFKIDFPTRHDWDSFFRDAKDMNETLPGER 145


>BC110496-1|AAI10497.1|  695|Homo sapiens splicing factor,
           arginine/serine-rich 17A protein.
          Length = 695

 Score =  132 bits (318), Expect = 1e-30
 Identities = 62/118 (52%), Positives = 82/118 (69%)
 Frame = +3

Query: 201 KLTLKYISLPTHKVHGKSISNWELMEKLRKMAQPDNFSVLKVSKQSFEVIRFEAELECRD 380
           K+T+  ++LP  K  GKSISNWE+ME+L+ M Q   FS L++SK + + IRFE E+E + 
Sbjct: 29  KMTIS-VALPQLKQPGKSISNWEVMERLKGMVQNHQFSTLRISKSTMDFIRFEGEVENKS 87

Query: 381 KLARVLAKLDGRVVQLNDYPDALKVRVTENKCDFPTHHSWDSFFRDATDMDEMKPGER 554
            +   LA LDG+ ++L+ + D LKVR  E K DFPT H WDSFFRDA DM+E  PGER
Sbjct: 88  LVKSFLACLDGKTIKLSGFSDILKVRAAEFKIDFPTRHDWDSFFRDAKDMNETLPGER 145


>BC028151-1|AAH28151.1|  446|Homo sapiens SFRS17A protein protein.
          Length = 446

 Score =  132 bits (318), Expect = 1e-30
 Identities = 62/118 (52%), Positives = 82/118 (69%)
 Frame = +3

Query: 201 KLTLKYISLPTHKVHGKSISNWELMEKLRKMAQPDNFSVLKVSKQSFEVIRFEAELECRD 380
           K+T+  ++LP  K  GKSISNWE+ME+L+ M Q   FS L++SK + + IRFE E+E + 
Sbjct: 29  KMTIS-VALPQLKQPGKSISNWEVMERLKGMVQNHQFSTLRISKSTMDFIRFEGEVENKS 87

Query: 381 KLARVLAKLDGRVVQLNDYPDALKVRVTENKCDFPTHHSWDSFFRDATDMDEMKPGER 554
            +   LA LDG+ ++L+ + D LKVR  E K DFPT H WDSFFRDA DM+E  PGER
Sbjct: 88  LVKSFLACLDGKTIKLSGFSDILKVRAAEFKIDFPTRHDWDSFFRDAKDMNETLPGER 145


>BC016935-1|AAH16935.1|  292|Homo sapiens Unknown (protein for
           IMAGE:4430810) protein.
          Length = 292

 Score =  132 bits (318), Expect = 1e-30
 Identities = 62/118 (52%), Positives = 82/118 (69%)
 Frame = +3

Query: 201 KLTLKYISLPTHKVHGKSISNWELMEKLRKMAQPDNFSVLKVSKQSFEVIRFEAELECRD 380
           K+T+  ++LP  K  GKSISNWE+ME+L+ M Q   FS L++SK + + IRFE E+E + 
Sbjct: 29  KMTIS-VALPQLKQPGKSISNWEVMERLKGMVQNHQFSTLRISKSTMDFIRFEGEVENKS 87

Query: 381 KLARVLAKLDGRVVQLNDYPDALKVRVTENKCDFPTHHSWDSFFRDATDMDEMKPGER 554
            +   LA LDG+ ++L+ + D LKVR  E K DFPT H WDSFFRDA DM+E  PGER
Sbjct: 88  LVKSFLACLDGKTIKLSGFSDILKVRAAEFKIDFPTRHDWDSFFRDAKDMNETLPGER 145


>AL683807-2|CAI41501.1|  695|Homo sapiens chromosome X and Y open
           reading frame 3 protein.
          Length = 695

 Score =  132 bits (318), Expect = 1e-30
 Identities = 62/118 (52%), Positives = 82/118 (69%)
 Frame = +3

Query: 201 KLTLKYISLPTHKVHGKSISNWELMEKLRKMAQPDNFSVLKVSKQSFEVIRFEAELECRD 380
           K+T+  ++LP  K  GKSISNWE+ME+L+ M Q   FS L++SK + + IRFE E+E + 
Sbjct: 29  KMTIS-VALPQLKQPGKSISNWEVMERLKGMVQNHQFSTLRISKSTMDFIRFEGEVENKS 87

Query: 381 KLARVLAKLDGRVVQLNDYPDALKVRVTENKCDFPTHHSWDSFFRDATDMDEMKPGER 554
            +   LA LDG+ ++L+ + D LKVR  E K DFPT H WDSFFRDA DM+E  PGER
Sbjct: 88  LVKSFLACLDGKTIKLSGFSDILKVRAAEFKIDFPTRHDWDSFFRDAKDMNETLPGER 145


>AL683807-1|CAI41499.1|  446|Homo sapiens chromosome X and Y open
           reading frame 3 protein.
          Length = 446

 Score =  132 bits (318), Expect = 1e-30
 Identities = 62/118 (52%), Positives = 82/118 (69%)
 Frame = +3

Query: 201 KLTLKYISLPTHKVHGKSISNWELMEKLRKMAQPDNFSVLKVSKQSFEVIRFEAELECRD 380
           K+T+  ++LP  K  GKSISNWE+ME+L+ M Q   FS L++SK + + IRFE E+E + 
Sbjct: 29  KMTIS-VALPQLKQPGKSISNWEVMERLKGMVQNHQFSTLRISKSTMDFIRFEGEVENKS 87

Query: 381 KLARVLAKLDGRVVQLNDYPDALKVRVTENKCDFPTHHSWDSFFRDATDMDEMKPGER 554
            +   LA LDG+ ++L+ + D LKVR  E K DFPT H WDSFFRDA DM+E  PGER
Sbjct: 88  LVKSFLACLDGKTIKLSGFSDILKVRAAEFKIDFPTRHDWDSFFRDAKDMNETLPGER 145


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 75,774,134
Number of Sequences: 237096
Number of extensions: 1446461
Number of successful extensions: 2697
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 2648
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2697
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5533942988
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)