Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0004_K05
(448 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q6DGH3 Cluster: Zgc:92922; n=13; Euteleostomi|Rep: Zgc:... 58 1e-07
UniRef50_P60468 Cluster: Protein transport protein Sec61 subunit... 55 6e-07
UniRef50_Q9WUG7 Cluster: ARL-6 interacting protein-3; n=1; Mus m... 42 0.008
UniRef50_A6R5C2 Cluster: Predicted protein; n=4; Ascomycota|Rep:... 39 0.057
UniRef50_A4RRJ9 Cluster: Predicted protein; n=1; Ostreococcus lu... 38 0.075
UniRef50_P38389 Cluster: Protein transport protein Sec61 subunit... 38 0.099
UniRef50_Q5BSB6 Cluster: SJCHGC05179 protein; n=3; Bilateria|Rep... 37 0.23
UniRef50_A5C5T6 Cluster: Putative uncharacterized protein; n=1; ... 36 0.40
UniRef50_A7PTV2 Cluster: Chromosome chr7 scaffold_31, whole geno... 34 1.2
UniRef50_Q01G20 Cluster: Protein transport protein subunit-like;... 34 1.6
UniRef50_A7PR73 Cluster: Chromosome chr14 scaffold_26, whole gen... 34 1.6
>UniRef50_Q6DGH3 Cluster: Zgc:92922; n=13; Euteleostomi|Rep:
Zgc:92922 - Danio rerio (Zebrafish) (Brachydanio rerio)
Length = 97
Score = 57.6 bits (133), Expect = 1e-07
Identities = 30/59 (50%), Positives = 33/59 (55%)
Frame = +1
Query: 271 TSAPRTASGXXXXXXXXXXXXXXXXXXXXGAGSGGMWRFYTDDSPGVKVGAV*VLVMSL 447
T APRTA AG+GGMWRFYT+DSPG+KVG V VLVMSL
Sbjct: 21 TVAPRTAGTSARQRKATSSSARSGGRSTASAGTGGMWRFYTEDSPGLKVGPVPVLVMSL 79
>UniRef50_P60468 Cluster: Protein transport protein Sec61 subunit
beta; n=31; Eukaryota|Rep: Protein transport protein
Sec61 subunit beta - Homo sapiens (Human)
Length = 96
Score = 55.2 bits (127), Expect = 6e-07
Identities = 24/29 (82%), Positives = 27/29 (93%)
Frame = +1
Query: 361 AGSGGMWRFYTDDSPGVKVGAV*VLVMSL 447
AG+GGMWRFYT+DSPG+KVG V VLVMSL
Sbjct: 50 AGTGGMWRFYTEDSPGLKVGPVPVLVMSL 78
>UniRef50_Q9WUG7 Cluster: ARL-6 interacting protein-3; n=1; Mus
musculus|Rep: ARL-6 interacting protein-3 - Mus musculus
(Mouse)
Length = 88
Score = 41.5 bits (93), Expect = 0.008
Identities = 15/22 (68%), Positives = 20/22 (90%)
Frame = +1
Query: 361 AGSGGMWRFYTDDSPGVKVGAV 426
AG+GGMWRFY ++SPG++VG V
Sbjct: 49 AGTGGMWRFYVENSPGLRVGPV 70
>UniRef50_A6R5C2 Cluster: Predicted protein; n=4; Ascomycota|Rep:
Predicted protein - Ajellomyces capsulatus NAm1
Length = 285
Score = 38.7 bits (86), Expect = 0.057
Identities = 18/30 (60%), Positives = 22/30 (73%)
Frame = +1
Query: 358 GAGSGGMWRFYTDDSPGVKVGAV*VLVMSL 447
G SG M + YTD+SPG+KV V VLV+SL
Sbjct: 236 GGSSGTMLKLYTDESPGLKVDPVVVLVLSL 265
>UniRef50_A4RRJ9 Cluster: Predicted protein; n=1; Ostreococcus
lucimarinus CCE9901|Rep: Predicted protein -
Ostreococcus lucimarinus CCE9901
Length = 76
Score = 38.3 bits (85), Expect = 0.075
Identities = 17/28 (60%), Positives = 22/28 (78%)
Frame = +1
Query: 364 GSGGMWRFYTDDSPGVKVGAV*VLVMSL 447
GSG + RFYTD+SPG+K+ V VL MS+
Sbjct: 25 GSGSLLRFYTDESPGLKITPVVVLGMSV 52
>UniRef50_P38389 Cluster: Protein transport protein Sec61 subunit
beta; n=13; Magnoliophyta|Rep: Protein transport protein
Sec61 subunit beta - Arabidopsis thaliana (Mouse-ear
cress)
Length = 82
Score = 37.9 bits (84), Expect = 0.099
Identities = 15/30 (50%), Positives = 22/30 (73%)
Frame = +1
Query: 358 GAGSGGMWRFYTDDSPGVKVGAV*VLVMSL 447
G +G M +FYTDD+PG+K+ VL+MS+
Sbjct: 34 GGAAGSMLQFYTDDAPGLKISPNVVLIMSI 63
>UniRef50_Q5BSB6 Cluster: SJCHGC05179 protein; n=3; Bilateria|Rep:
SJCHGC05179 protein - Schistosoma japonicum (Blood
fluke)
Length = 88
Score = 36.7 bits (81), Expect = 0.23
Identities = 16/21 (76%), Positives = 19/21 (90%)
Frame = +1
Query: 385 FYTDDSPGVKVGAV*VLVMSL 447
FY++DSPG+KVG V VLVMSL
Sbjct: 49 FYSEDSPGIKVGPVPVLVMSL 69
>UniRef50_A5C5T6 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 422
Score = 35.9 bits (79), Expect = 0.40
Identities = 18/32 (56%), Positives = 23/32 (71%), Gaps = 2/32 (6%)
Frame = +1
Query: 358 GAGSGG--MWRFYTDDSPGVKVGAV*VLVMSL 447
G+GS G + RFYTDD PG+K+ + VLV SL
Sbjct: 302 GSGSSGSNLLRFYTDDPPGLKITPMVVLVTSL 333
>UniRef50_A7PTV2 Cluster: Chromosome chr7 scaffold_31, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr7 scaffold_31, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 127
Score = 34.3 bits (75), Expect = 1.2
Identities = 15/30 (50%), Positives = 19/30 (63%)
Frame = +1
Query: 358 GAGSGGMWRFYTDDSPGVKVGAV*VLVMSL 447
G+ M FYTDD PG+K+ VLVM+L
Sbjct: 74 GSSESNMLLFYTDDDPGLKITPTVVLVMNL 103
>UniRef50_Q01G20 Cluster: Protein transport protein subunit-like;
n=1; Ostreococcus tauri|Rep: Protein transport protein
subunit-like - Ostreococcus tauri
Length = 91
Score = 33.9 bits (74), Expect = 1.6
Identities = 15/26 (57%), Positives = 20/26 (76%)
Frame = +1
Query: 370 GGMWRFYTDDSPGVKVGAV*VLVMSL 447
G M RFY+D+SPG+K+ V VL MS+
Sbjct: 44 GSMLRFYSDESPGLKITPVVVLGMSV 69
>UniRef50_A7PR73 Cluster: Chromosome chr14 scaffold_26, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr14 scaffold_26, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 166
Score = 33.9 bits (74), Expect = 1.6
Identities = 17/31 (54%), Positives = 21/31 (67%), Gaps = 4/31 (12%)
Frame = +1
Query: 367 SGGMW----RFYTDDSPGVKVGAV*VLVMSL 447
SG W RFYTDD+PG+K+ + VLV SL
Sbjct: 28 SGNSWSNLLRFYTDDAPGLKITPMVVLVTSL 58
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 367,221,345
Number of Sequences: 1657284
Number of extensions: 5895990
Number of successful extensions: 12789
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 12425
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12782
length of database: 575,637,011
effective HSP length: 93
effective length of database: 421,509,599
effective search space used: 23183027945
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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