Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0004_K04
         (480 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X98186-1|CAA66861.1|  269|Anopheles gambiae put. S3a ribosomal p...    23   4.1  
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            23   4.1  
AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p...    23   7.2  
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            22   9.5  

>X98186-1|CAA66861.1|  269|Anopheles gambiae put. S3a ribosomal
           protein homologue protein.
          Length = 269

 Score = 23.4 bits (48), Expect = 4.1
 Identities = 11/35 (31%), Positives = 19/35 (54%)
 Frame = -3

Query: 337 LIACSLCAFLTSGFMLRLAMMSLSEAPTIARWNFC 233
           LI CS+    T GFMLR+  +  +   ++++   C
Sbjct: 123 LIECSVDVKTTDGFMLRVFCIGFTIKDSMSQRKTC 157


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 23.4 bits (48), Expect = 4.1
 Identities = 11/36 (30%), Positives = 17/36 (47%)
 Frame = -2

Query: 152  FTGISPHQMGSFTFGVQECECLAVHLNHGFSMARID 45
            F   +   + +FTFG+   E   +  N   SMA I+
Sbjct: 3278 FYSNNSQSLNNFTFGLHTQEIFPLQFNKASSMATIN 3313


>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
            protein.
          Length = 3325

 Score = 22.6 bits (46), Expect = 7.2
 Identities = 11/33 (33%), Positives = 18/33 (54%), Gaps = 2/33 (6%)
 Frame = -3

Query: 283  AMMSLSEAPTIARWNFCVLLVRFL-ACS-SSWP 191
            A++ L +AP +AR  F +    F+  C+   WP
Sbjct: 1103 ALLDLPQAPIVARAAFLIECAHFVHLCNRGQWP 1135


>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 22.2 bits (45), Expect = 9.5
 Identities = 10/28 (35%), Positives = 15/28 (53%)
 Frame = -2

Query: 128  MGSFTFGVQECECLAVHLNHGFSMARID 45
            + +F FG+   E L +  N   SMA I+
Sbjct: 3283 LNNFKFGLHTQEILPLQFNKASSMATIN 3310


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 430,230
Number of Sequences: 2352
Number of extensions: 7731
Number of successful extensions: 15
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 41863041
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)