Samia BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0004_K03
         (539 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI000156160A Cluster: PREDICTED: similar to butyrophil...    36   0.79 
UniRef50_Q9F8B8 Cluster: Methyltransferase; n=47; Bacteria|Rep: ...    34   1.8  
UniRef50_Q3B7T1 Cluster: Erythroid differentiation-related facto...    33   4.2  
UniRef50_Q5ZE54 Cluster: Cytochrome P450-like; n=3; Oryza sativa...    33   5.6  

>UniRef50_UPI000156160A Cluster: PREDICTED: similar to butyrophilin
           related 1; n=3; Equus caballus|Rep: PREDICTED: similar
           to butyrophilin related 1 - Equus caballus
          Length = 305

 Score = 35.5 bits (78), Expect = 0.79
 Identities = 15/42 (35%), Positives = 25/42 (59%)
 Frame = -2

Query: 448 LYW*FMSGTFLCQFSWSHTSVIHFTLRSLNIFIKRSTEFYPF 323
           L W  +  +FLC FSW+H+S ++    S  + ++ S+  YPF
Sbjct: 262 LSWSPVHFSFLCVFSWAHSSFLYSAEESSTVGLQHSSLTYPF 303


>UniRef50_Q9F8B8 Cluster: Methyltransferase; n=47; Bacteria|Rep:
           Methyltransferase - Streptococcus agalactiae
          Length = 254

 Score = 34.3 bits (75), Expect = 1.8
 Identities = 12/32 (37%), Positives = 22/32 (68%)
 Frame = -2

Query: 97  RRMRPAGLRGTKWRNERGHLSAALRLVPNSCS 2
           +R+RP G++ T W  ++GH SA  R++  +C+
Sbjct: 20  KRLRPGGVQATNWLIKKGHFSADSRVLEVACN 51


>UniRef50_Q3B7T1 Cluster: Erythroid differentiation-related factor
           1; n=43; Euteleostomi|Rep: Erythroid
           differentiation-related factor 1 - Homo sapiens (Human)
          Length = 1238

 Score = 33.1 bits (72), Expect = 4.2
 Identities = 16/46 (34%), Positives = 26/46 (56%)
 Frame = -1

Query: 146 RGGVSFKNRNDIEKDTAKNETGGIERNEVEKRTRPSFSSAAPRAEF 9
           RGG+S  ++ + E+ +A+     +  NEV+ R    +SSA PR  F
Sbjct: 19  RGGLSLLSQGESEESSAQGSALFLGGNEVKSRAVVKYSSAPPRTAF 64


>UniRef50_Q5ZE54 Cluster: Cytochrome P450-like; n=3; Oryza
           sativa|Rep: Cytochrome P450-like - Oryza sativa subsp.
           japonica (Rice)
          Length = 554

 Score = 32.7 bits (71), Expect = 5.6
 Identities = 17/43 (39%), Positives = 26/43 (60%)
 Frame = -2

Query: 145 AAVLVSKIVMTSRKIPRRMRPAGLRGTKWRNERGHLSAALRLV 17
           AA ++    +  R++ R +R  GLRGT++R   G L+  LRLV
Sbjct: 51  AAQMLEWAWLAPRRMERALRAQGLRGTQYRFLHGDLTEDLRLV 93


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 453,711,917
Number of Sequences: 1657284
Number of extensions: 7994260
Number of successful extensions: 21989
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 21508
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21985
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 34572633001
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)