Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0004_K03
         (539 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT021223-1|AAX33371.1|  236|Drosophila melanogaster RH52407p pro...    28   9.4  
AE014134-229|AAF51395.3|  350|Drosophila melanogaster CG5001-PA ...    28   9.4  

>BT021223-1|AAX33371.1|  236|Drosophila melanogaster RH52407p
           protein.
          Length = 236

 Score = 27.9 bits (59), Expect = 9.4
 Identities = 12/46 (26%), Positives = 25/46 (54%)
 Frame = +2

Query: 284 FKSIQFDF*QDVRKRVKLSRPLYENVQGTKSEVNYGCVRPRKLTQK 421
           F+S  F+     +K  K   P+  ++  T  E+ +GCV+  K++++
Sbjct: 41  FRSHSFNVHTPFKKEQKQDPPVEHDLYVTLEEIYHGCVKKMKISRR 86


>AE014134-229|AAF51395.3|  350|Drosophila melanogaster CG5001-PA
           protein.
          Length = 350

 Score = 27.9 bits (59), Expect = 9.4
 Identities = 12/46 (26%), Positives = 25/46 (54%)
 Frame = +2

Query: 284 FKSIQFDF*QDVRKRVKLSRPLYENVQGTKSEVNYGCVRPRKLTQK 421
           F+S  F+     +K  K   P+  ++  T  E+ +GCV+  K++++
Sbjct: 155 FRSHSFNVHTPFKKEQKQDPPVEHDLYVTLEEIYHGCVKKMKISRR 200


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,490,053
Number of Sequences: 53049
Number of extensions: 369349
Number of successful extensions: 883
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 848
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 883
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 2053700352
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)