Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0004_K01
         (461 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    22   3.2  
AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory recept...    21   4.2  
EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    21   7.4  
AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    21   7.4  
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    20   9.7  
AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone recepto...    20   9.7  

>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 21.8 bits (44), Expect = 3.2
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = +1

Query: 226 WPTSVLLWQLFRHGATFY 279
           W   VLLW++   G T Y
Sbjct: 678 WSFGVLLWEIVTLGGTPY 695


>AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory receptor
           candidate 42 protein.
          Length = 347

 Score = 21.4 bits (43), Expect = 4.2
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = -1

Query: 83  IFKMTILLFISECTSFFII 27
           I K T+L  I   T+FFII
Sbjct: 321 INKTTLLQIIGNVTTFFII 339


>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 20.6 bits (41), Expect = 7.4
 Identities = 9/23 (39%), Positives = 15/23 (65%)
 Frame = +2

Query: 332 DSKIKSEETFTDITSYDDNKSLS 400
           + K ++ +TF D+ S   NKSL+
Sbjct: 399 NGKPRTTDTFLDLWSDYQNKSLA 421


>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 20.6 bits (41), Expect = 7.4
 Identities = 6/15 (40%), Positives = 9/15 (60%)
 Frame = +1

Query: 202 QFKYCNV*WPTSVLL 246
           QF +C   WP  +L+
Sbjct: 574 QFNFCGCGWPQHMLI 588


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 20.2 bits (40), Expect = 9.7
 Identities = 6/15 (40%), Positives = 9/15 (60%)
 Frame = +1

Query: 202 QFKYCNV*WPTSVLL 246
           +F +C   WP  +LL
Sbjct: 573 EFNFCGCGWPQHMLL 587


>AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone receptor
           (isoform A) protein.
          Length = 549

 Score = 20.2 bits (40), Expect = 9.7
 Identities = 8/22 (36%), Positives = 11/22 (50%)
 Frame = -2

Query: 379 IRCNVCKGFF*FYLRIKNLLQC 314
           + C  CKGFF   +    + QC
Sbjct: 203 LTCEGCKGFFRRSITKNAVYQC 224


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 89,802
Number of Sequences: 336
Number of extensions: 1632
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10616413
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)