Samia BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0004_J24
         (552 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q2V2M6 Cluster: CGMP-specific phosphodiesterase; n=3; P...    35   1.1  
UniRef50_Q9CI32 Cluster: ABC transporter permease protein; n=3; ...    33   5.8  
UniRef50_Q5YR96 Cluster: Putative uncharacterized protein; n=4; ...    33   5.8  
UniRef50_Q8I361 Cluster: Putative uncharacterized protein PFI044...    32   7.7  
UniRef50_Q59NM9 Cluster: Putative uncharacterized protein; n=1; ...    32   7.7  

>UniRef50_Q2V2M6 Cluster: CGMP-specific phosphodiesterase; n=3;
           Plasmodium|Rep: CGMP-specific phosphodiesterase -
           Plasmodium falciparum
          Length = 884

 Score = 35.1 bits (77), Expect = 1.1
 Identities = 32/131 (24%), Positives = 61/131 (46%), Gaps = 3/131 (2%)
 Frame = -3

Query: 544 YNNNNLFILYKLTNTAQRSINTYLPKTFCSILIHNIYMAPWTHLNTI*RIQLN*HYSNSI 365
           YNNNN+ I+     T  ++I   +  +F +  I+  Y   + HLN     + N +  N+I
Sbjct: 41  YNNNNMNIINNKNITNNKNITNNINNSFSNDYIN--YNHNYNHLNNSSSSKHNNYNVNNI 98

Query: 364 N*TFVKFNFFYFKVTYYITYHKYFVV*IFSRSLNVIAFYV*IILEQLKSYYSQYLLS--- 194
           +   +K +        Y TYH  +    F  + +   + +  ++++L  +Y  Y+ +   
Sbjct: 99  DEKNIKND--------YNTYHNIYEQIFFKYNPSFYEYLMFTLMKKL-IHYKNYIFNKTK 149

Query: 193 KIRNSFGKNNI 161
           KI NS+  N+I
Sbjct: 150 KINNSYNNNDI 160


>UniRef50_Q9CI32 Cluster: ABC transporter permease protein; n=3;
           Lactococcus lactis|Rep: ABC transporter permease protein
           - Lactococcus lactis subsp. lactis (Streptococcus
           lactis)
          Length = 241

 Score = 32.7 bits (71), Expect = 5.8
 Identities = 24/91 (26%), Positives = 46/91 (50%)
 Frame = -3

Query: 529 LFILYKLTNTAQRSINTYLPKTFCSILIHNIYMAPWTHLNTI*RIQLN*HYSNSIN*TFV 350
           LF+++  +++  +SI  Y+     SIL++++  A  T L+    +Q+  H S  I   FV
Sbjct: 29  LFLMFAFSSSFGKSIPHYIENNIASILLYSVLSASLTSLS----VQIADHQSGKIYQLFV 84

Query: 349 KFNFFYFKVTYYITYHKYFVV*IFSRSLNVI 257
           +      K+ Y I     F++ IF  +L ++
Sbjct: 85  QRGI--KKLFYIIAQIVSFMIIIFCSTLVIL 113


>UniRef50_Q5YR96 Cluster: Putative uncharacterized protein; n=4;
           Bacteria|Rep: Putative uncharacterized protein -
           Nocardia farcinica
          Length = 938

 Score = 32.7 bits (71), Expect = 5.8
 Identities = 11/32 (34%), Positives = 23/32 (71%)
 Frame = -3

Query: 193 KIRNSFGKNNIPVVLEFRKAVPSGRSANSFDI 98
           ++RN FG+  IP++ +F +  P GR+A ++++
Sbjct: 462 QVRNLFGRQAIPMLWDFAETRPFGRAAGAYEV 493


>UniRef50_Q8I361 Cluster: Putative uncharacterized protein PFI0440w;
           n=1; Plasmodium falciparum 3D7|Rep: Putative
           uncharacterized protein PFI0440w - Plasmodium falciparum
           (isolate 3D7)
          Length = 690

 Score = 32.3 bits (70), Expect = 7.7
 Identities = 22/67 (32%), Positives = 32/67 (47%), Gaps = 5/67 (7%)
 Frame = -3

Query: 346 FNFFYFKVTYYITY-----HKYFVV*IFSRSLNVIAFYV*IILEQLKSYYSQYLLSKIRN 182
           FN F +K  YYI +       +F+  +F   +N I F++  I +Q K Y S Y    I N
Sbjct: 476 FNLFNYKGVYYIVFIFFINFSFFLYCLFLYKINTIYFFLRQIYKQCK-YESIYYCDHIMN 534

Query: 181 SFGKNNI 161
              +N I
Sbjct: 535 DIYENFI 541


>UniRef50_Q59NM9 Cluster: Putative uncharacterized protein; n=1;
           Candida albicans|Rep: Putative uncharacterized protein -
           Candida albicans (Yeast)
          Length = 647

 Score = 32.3 bits (70), Expect = 7.7
 Identities = 23/78 (29%), Positives = 37/78 (47%), Gaps = 1/78 (1%)
 Frame = -3

Query: 391 LN*HYSNSIN*TFVKFNFFYFKVTYYITYHKYFVV*IFSRSLNVIA-FYV*IILEQLKSY 215
           LN  Y +S N    +F  FY   T+Y+++H Y ++   + SLNV A  Y   ++  L S 
Sbjct: 247 LNVLYESSPNRNIYRFASFYLLSTFYLSFHAYILI-YQTVSLNVAANSYSNALMTLLLSN 305

Query: 214 YSQYLLSKIRNSFGKNNI 161
               L S +   F +  +
Sbjct: 306 QFSELKSSVFKKFEREGL 323


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 475,240,533
Number of Sequences: 1657284
Number of extensions: 8701377
Number of successful extensions: 18963
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 18402
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18947
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 36238783989
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)