Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0004_J24
         (552 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              25   0.51 
AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    21   6.3  
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           21   6.3  
DQ666693-1|ABG29167.1|  250|Apis mellifera MAX dimerization prot...    21   8.3  

>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 25.0 bits (52), Expect = 0.51
 Identities = 8/28 (28%), Positives = 17/28 (60%)
 Frame = +2

Query: 26  SASYLIDLIIIGFSKNNTRTYERDDIER 109
           S  YL+ ++   + +NN    ER+++E+
Sbjct: 233 SKEYLVSIMFSHYDRNNNGNLEREELEQ 260


>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = +3

Query: 480 VLIDLWAVFVN 512
           VLID W  FVN
Sbjct: 491 VLIDFWVSFVN 501


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = +3

Query: 480 VLIDLWAVFVN 512
           VLID W  FVN
Sbjct: 491 VLIDFWVSFVN 501


>DQ666693-1|ABG29167.1|  250|Apis mellifera MAX dimerization protein
           protein.
          Length = 250

 Score = 21.0 bits (42), Expect = 8.3
 Identities = 11/36 (30%), Positives = 15/36 (41%)
 Frame = +3

Query: 60  DLVKITREHTKETISNEFALRPLGTALRNSNTTGIL 167
           +L K  R H +  +     L PLG       T G+L
Sbjct: 55  ELEKNRRAHLRNCLEKLKVLVPLGPETSRHTTLGLL 90


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 145,200
Number of Sequences: 438
Number of extensions: 2920
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 15827139
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)