Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0004_J19
(568 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_02_0665 - 10268959-10269148,10269344-10269936,10270572-102710... 126 9e-30
12_01_0038 - 312152-312748,312930-313362,313572-314440,314535-31... 122 2e-28
11_01_0039 - 290960-291086,291615-291714,291809-292013,292466-29... 120 8e-28
07_03_1774 + 29425486-29425831,29426018-29426235,29426337-294271... 92 3e-19
11_04_0388 + 17076157-17076254,17076762-17076813,17077672-170778... 73 2e-13
06_01_1006 + 7836366-7836460,7836568-7836626,7836877-7836961,783... 43 1e-04
03_06_0476 + 34199577-34199638,34200267-34200397,34200535-342006... 42 5e-04
11_01_0366 + 2793732-2793838,2793944-2794979 31 0.64
06_01_0097 - 810283-810296,810398-810521,810974-811066,811144-81... 30 1.5
07_01_1060 + 9330217-9330219,9330490-9330561,9330773-9330917,933... 29 3.4
04_04_0711 - 27468045-27468264,27468831-27468935,27469431-274694... 29 3.4
09_02_0569 - 10752756-10753164,10753229-10753644,10754149-107553... 28 4.5
11_04_0321 - 16359390-16359539,16359674-16359746,16360448-163608... 28 6.0
07_03_1792 + 29569623-29569737,29569848-29569981,29570117-295702... 28 6.0
07_03_0254 + 15857809-15858018,15858151-15858264,15859809-158600... 28 6.0
07_01_1064 + 9385330-9385432,9386181-9386236,9386938-9387082,938... 28 6.0
06_03_0160 + 17366392-17367525,17367856-17368206 28 6.0
03_02_0536 - 9284079-9286034 28 6.0
01_05_0323 - 20934429-20934447,20934658-20934774,20934815-209349... 28 6.0
07_02_0019 + 11877119-11879984,11880316-11880389,11881293-118815... 27 7.9
06_03_1359 + 29554078-29554375,29554470-29554655,29554768-295549... 27 7.9
01_06_1631 - 38760452-38760466,38760696-38760788,38760838-38761539 27 7.9
>03_02_0665 -
10268959-10269148,10269344-10269936,10270572-10271004,
10271172-10272040,10272121-10272915,10273612-10273829,
10274931-10275230,10276834-10277161
Length = 1241
Score = 126 bits (305), Expect = 9e-30
Identities = 73/155 (47%), Positives = 96/155 (61%), Gaps = 10/155 (6%)
Frame = +1
Query: 133 ADNSVDPPVKKRKLNT----------GEAQSNNTAMANNGARVDDEIDESLYSRQLYVLG 282
A++S D P KK ++ GEA ++ NG+ V EIDE L+SRQL V G
Sbjct: 127 AESSSDAPAKKARVGASASEAEAMVAGEAGGGGGGVSGNGSEVA-EIDEDLHSRQLAVYG 185
Query: 283 HDAMRRMASSDVLISGLGGLGVEIAKNVILGGVKSVTLHDEHTCTVGDLSSQFYLSENMI 462
+ MRR+ +S+VL+SGL GLG EIAKN+ L GVKS+TLHD + DLS F+LSE+ I
Sbjct: 186 RETMRRLFASNVLVSGLNGLGAEIAKNLALAGVKSITLHDMGNVEMWDLSGNFFLSEDDI 245
Query: 463 GQNRAIASCEQLSELNHYVPTTAHTGPLTEEFLLK 567
G+NRA+A +L ELN+ V + T LT E L K
Sbjct: 246 GKNRAVACTAKLQELNNAVLISTLTEDLTNEHLSK 280
>12_01_0038 -
312152-312748,312930-313362,313572-314440,314535-314584,
314589-315192,315674-315718,316100-316317,317020-317332,
318681-318716
Length = 1054
Score = 122 bits (294), Expect = 2e-28
Identities = 65/134 (48%), Positives = 87/134 (64%)
Frame = +1
Query: 160 KKRKLNTGEAQSNNTAMANNGARVDDEIDESLYSRQLYVLGHDAMRRMASSDVLISGLGG 339
KK + + A N+T EIDE L+SRQL V G + M+R+ +S+VL+SGL G
Sbjct: 56 KKTRADDEPADDNHTMTTGRAP----EIDEDLHSRQLAVYGRETMKRLFASNVLVSGLNG 111
Query: 340 LGVEIAKNVILGGVKSVTLHDEHTCTVGDLSSQFYLSENMIGQNRAIASCEQLSELNHYV 519
LG EIAKN++L GVKSVTLHD+ + DLSS F+L+E +GQNRA ++L ELN+ V
Sbjct: 112 LGAEIAKNLVLAGVKSVTLHDDDNVELWDLSSNFFLTEKDVGQNRAQTCVQKLQELNNAV 171
Query: 520 PTTAHTGPLTEEFL 561
+ TG LT+E L
Sbjct: 172 IISTITGDLTKEQL 185
>11_01_0039 -
290960-291086,291615-291714,291809-292013,292466-292513,
295071-295646,295828-296260,296470-297338,297433-298227,
298709-298753,299135-299352,300055-300364,302715-302984
Length = 1331
Score = 120 bits (289), Expect = 8e-28
Identities = 64/134 (47%), Positives = 86/134 (64%)
Frame = +1
Query: 160 KKRKLNTGEAQSNNTAMANNGARVDDEIDESLYSRQLYVLGHDAMRRMASSDVLISGLGG 339
KK + + A N+T EIDE L+SRQL V G + M+R+ +S+VL+SGL G
Sbjct: 133 KKTRADDEPADDNHTMTTGRAP----EIDEDLHSRQLAVYGRETMKRLFASNVLVSGLNG 188
Query: 340 LGVEIAKNVILGGVKSVTLHDEHTCTVGDLSSQFYLSENMIGQNRAIASCEQLSELNHYV 519
LG EIAKN++L GVKSV LHD+ + DLSS F+L+E +GQNRA ++L ELN+ V
Sbjct: 189 LGAEIAKNLVLAGVKSVNLHDDDNVELWDLSSNFFLTEKDVGQNRAQTCVQKLQELNNAV 248
Query: 520 PTTAHTGPLTEEFL 561
+ TG LT+E L
Sbjct: 249 IISTITGDLTKEQL 262
>07_03_1774 +
29425486-29425831,29426018-29426235,29426337-29427131,
29427206-29428074,29428317-29428749,29429263-29429859
Length = 1085
Score = 91.9 bits (218), Expect = 3e-19
Identities = 70/171 (40%), Positives = 90/171 (52%), Gaps = 33/171 (19%)
Frame = +1
Query: 154 PVKKRKLNTGEAQSNNTA---MANNGAR---VDDEIDESLYSRQLYVLGHDAMRRMASSD 315
P KR T + + + +A NG+ V EIDE L+SRQL V G + MRR+ +S
Sbjct: 16 PTNKRAAGTDDDRPTDPKRPKVAQNGSTNGVVVPEIDEDLHSRQLAVYGRETMRRLFASH 75
Query: 316 VLISGLGGLGV-------------------EIA--------KNVILGGVKSVTLHDEHTC 414
VL+SGL GLG +IA KN+ L GVKSVTLHD
Sbjct: 76 VLVSGLNGLGAEIGSSFYPLTLFVLCFFLFQIAFNCLLITTKNLALAGVKSVTLHDVKNV 135
Query: 415 TVGDLSSQFYLSENMIGQNRAIASCEQLSELNHYVPTTAHTGPLTEEFLLK 567
+ DLS+ F+LSEN IG+NRA A +L ELN+ V +A T LT + L K
Sbjct: 136 EMWDLSANFFLSENDIGKNRAAACVSKLQELNNAVLVSALTEELTTDHLSK 186
>11_04_0388 +
17076157-17076254,17076762-17076813,17077672-17077867,
17078242-17078321,17078465-17078581,17078895-17078950,
17079238-17079268,17079292-17079342,17080411-17080477,
17080621-17080724,17080802-17080909,17081874-17081987
Length = 357
Score = 72.9 bits (171), Expect = 2e-13
Identities = 37/102 (36%), Positives = 59/102 (57%), Gaps = 3/102 (2%)
Frame = +1
Query: 244 DESLYSRQLYVLGHDAMRRMASSDVLISGLGGLGVEIAKNVILGGVKSVTLHDEHTCTVG 423
+ +LY RQ+ V G DA +R++ + VL+ G+ G E KN++L GV S++L D+H T
Sbjct: 15 ETALYDRQIRVWGVDAQKRLSKAHVLVCGMNGTTTEFCKNIVLAGVGSLSLMDDHLVTED 74
Query: 424 DLSSQFYL--SENMI-GQNRAIASCEQLSELNHYVPTTAHTG 540
DL++ F + E++ G++RA CE L + N V G
Sbjct: 75 DLNANFLIPHDESIYGGRSRAEVCCESLKDFNPMVRVAVEKG 116
>06_01_1006 +
7836366-7836460,7836568-7836626,7836877-7836961,
7837349-7837496,7837774-7837986,7838403-7838537,
7838659-7838790,7838884-7839099,7839212-7839336,
7839787-7839844,7839977-7840087
Length = 458
Score = 43.2 bits (97), Expect = 1e-04
Identities = 23/100 (23%), Positives = 47/100 (47%)
Frame = +1
Query: 181 GEAQSNNTAMANNGARVDDEIDESLYSRQLYVLGHDAMRRMASSDVLISGLGGLGVEIAK 360
G S T + +DDE+ +R + G ++ +++ S V++ GLGG+G A
Sbjct: 53 GAGSSVGTRVVATSDLLDDEVVSEQLTRNIQFFGMESQKKVTGSFVVVIGLGGVGSHAAS 112
Query: 361 NVILGGVKSVTLHDEHTCTVGDLSSQFYLSENMIGQNRAI 480
++ GV + L D ++ L+ + + +G +A+
Sbjct: 113 MLLRSGVGRLLLVDFDQVSLSSLNRHAVATRDDVGTPKAL 152
>03_06_0476 +
34199577-34199638,34200267-34200397,34200535-34200698,
34201007-34201117,34201308-34201387,34201489-34201639,
34201736-34201829,34202421-34202509,34203672-34203745,
34203859-34204021,34204445-34204530,34205011-34205094,
34205186-34205366,34205837-34205887
Length = 506
Score = 41.5 bits (93), Expect = 5e-04
Identities = 28/88 (31%), Positives = 40/88 (45%)
Frame = +1
Query: 256 YSRQLYVLGHDAMRRMASSDVLISGLGGLGVEIAKNVILGGVKSVTLHDEHTCTVGDLSS 435
Y RQL + G + + + + G G E KN++LGGV SVT+ D
Sbjct: 16 YDRQLRIWGDQGQAALEKASICLLTCGPTGTEAMKNLVLGGVGSVTVVD----------- 64
Query: 436 QFYLSENMIGQNRAIASCEQLSELNHYV 519
+ +GQ+RA + C L ELN V
Sbjct: 65 ---VDAECLGQSRAKSVCSFLQELNDAV 89
>11_01_0366 + 2793732-2793838,2793944-2794979
Length = 380
Score = 31.1 bits (67), Expect = 0.64
Identities = 16/45 (35%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = +1
Query: 265 QLYVLGHDAMRRMASSDVLISGLGGLGVEIAKNVILGG-VKSVTL 396
+L + HD R ++ VL+ G G +GVE+A +++ K VTL
Sbjct: 115 RLQMFEHDKARIASAGSVLVVGGGPIGVELAAEIVMASPEKRVTL 159
>06_01_0097 -
810283-810296,810398-810521,810974-811066,811144-811236,
811410-811514,811661-811732,811857-811934,812210-812379,
812507-812741,812832-813074,813243-813338,813445-813582,
814014-814139,814235-814453
Length = 601
Score = 29.9 bits (64), Expect = 1.5
Identities = 17/53 (32%), Positives = 27/53 (50%)
Frame = +1
Query: 337 GLGVEIAKNVILGGVKSVTLHDEHTCTVGDLSSQFYLSENMIGQNRAIASCEQ 495
GL ++ A +LG V L+ E T VGD S+Q +++ + I + EQ
Sbjct: 361 GLSLDKADKSVLGTAAKVVLNKESTTIVGDGSTQEEVTKRVAQIKNLIEAAEQ 413
>07_01_1060 +
9330217-9330219,9330490-9330561,9330773-9330917,
9331006-9331133,9331689-9331803,9331881-9331984,
9332356-9332568,9332637-9332657
Length = 266
Score = 28.7 bits (61), Expect = 3.4
Identities = 14/23 (60%), Positives = 16/23 (69%)
Frame = +1
Query: 316 VLISGLGGLGVEIAKNVILGGVK 384
VLI G G +GVEIAK + GVK
Sbjct: 117 VLILGFGAIGVEIAKRIRPFGVK 139
>04_04_0711 -
27468045-27468264,27468831-27468935,27469431-27469489,
27469566-27470009,27470123-27470187,27470871-27471066,
27471429-27471590
Length = 416
Score = 28.7 bits (61), Expect = 3.4
Identities = 13/45 (28%), Positives = 24/45 (53%), Gaps = 3/45 (6%)
Frame = +1
Query: 340 LGVEIAKNVILGGVKSVTL---HDEHTCTVGDLSSQFYLSENMIG 465
+G A + G+++ L H EHT VG+ ++ F +S ++G
Sbjct: 146 IGAVAAMRYVKDGIRAAKLVMDHTEHTLLVGEKATSFAISMGLVG 190
>09_02_0569 -
10752756-10753164,10753229-10753644,10754149-10755349,
10756770-10756991,10757615-10757767,10757883-10758034,
10758142-10758222,10758353-10758598,10759394-10759516
Length = 1000
Score = 28.3 bits (60), Expect = 4.5
Identities = 13/28 (46%), Positives = 15/28 (53%)
Frame = -3
Query: 395 KVTDFTPPRMTFLAISTPRPPSPEIRTS 312
K D PPR A S+P PP P +R S
Sbjct: 11 KPFDVYPPRPLAAAASSPPPPPPPLRVS 38
>11_04_0321 -
16359390-16359539,16359674-16359746,16360448-16360845,
16360919-16362673,16362751-16362861,16363745-16363962,
16364088-16364196
Length = 937
Score = 27.9 bits (59), Expect = 6.0
Identities = 19/58 (32%), Positives = 30/58 (51%), Gaps = 3/58 (5%)
Frame = +1
Query: 310 SDVLISGLGGLGVEIAKNVILGGVKSVTLHDEHTC--TVGDLSSQF-YLSENMIGQNR 474
SD + L G I N++ GG+ T + H C T+ + +S+ + SE IG+NR
Sbjct: 451 SDKVNQALYDDGNIIKNNMVFGGLNKQTALESHGCSMTLHNRNSEANHFSEQNIGRNR 508
>07_03_1792 +
29569623-29569737,29569848-29569981,29570117-29570284,
29572817-29573003,29573098-29573422,29573591-29574368,
29574897-29575022
Length = 610
Score = 27.9 bits (59), Expect = 6.0
Identities = 22/69 (31%), Positives = 35/69 (50%)
Frame = +1
Query: 40 FYLKIISSHCLRKPKFWQNCARSCPMSSAEVADNSVDPPVKKRKLNTGEAQSNNTAMANN 219
F +K I + L+ WQ+ R C SS +++ + K K +G+ +SNN NN
Sbjct: 60 FLVKPIRKNELKN--LWQHVWRRCHSSSGSGSESGIQTQ-KCAKSKSGD-ESNN----NN 111
Query: 220 GARVDDEID 246
G+ DD+ D
Sbjct: 112 GSNDDDDDD 120
>07_03_0254 +
15857809-15858018,15858151-15858264,15859809-15860010,
15860245-15860319,15860406-15860498,15860554-15860636,
15861067-15861180,15861632-15861746,15861840-15862030,
15862102-15862218,15862514-15862594,15862729-15862964,
15863219-15863258,15863393-15863968
Length = 748
Score = 27.9 bits (59), Expect = 6.0
Identities = 17/64 (26%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Frame = +1
Query: 241 IDESLY-SRQLYVLGHDAMRRMASSDVLISGLGGLGVEIAKNVILGGVKSVTLHDEHTCT 417
+D SL+ + + + +D + ++ + G+ L V + +N++ GGV S D H T
Sbjct: 676 LDSSLFPADRANQVRYDPLENVSIEIYDVPGISSLNV-VVRNILDGGVNSSRRIDRHGKT 734
Query: 418 VGDL 429
+ DL
Sbjct: 735 LSDL 738
>07_01_1064 +
9385330-9385432,9386181-9386236,9386938-9387082,
9387126-9387298,9388058-9388129,9388222-9388336,
9388418-9388521,9388604-9388645,9388932-9389144,
9389621-9389689
Length = 363
Score = 27.9 bits (59), Expect = 6.0
Identities = 14/23 (60%), Positives = 16/23 (69%)
Frame = +1
Query: 316 VLISGLGGLGVEIAKNVILGGVK 384
VLI G G +GVEIAK + GVK
Sbjct: 184 VLILGFGAIGVEIAKRLRPFGVK 206
>06_03_0160 + 17366392-17367525,17367856-17368206
Length = 494
Score = 27.9 bits (59), Expect = 6.0
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = +1
Query: 76 KPKFWQNCARSCPMSSAEVADNSVD 150
K FW+N R CP ++A N VD
Sbjct: 345 KEAFWKNGNRDCPPELLQLAQNFVD 369
>03_02_0536 - 9284079-9286034
Length = 651
Score = 27.9 bits (59), Expect = 6.0
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = -1
Query: 157 PGGQRNYRRLQH*TSGTNAHNSARILVCVDNVRKLSSDR 41
P +R+ R + H TSG+ AH +A + C R+LS R
Sbjct: 46 PAEERHIREILHLTSGSRAHVAAAVAGC---SRRLSRTR 81
>01_05_0323 -
20934429-20934447,20934658-20934774,20934815-20934964,
20935578-20935828,20936403-20936449,20936852-20936976,
20937039-20937154,20937194-20937284,20937772-20937893,
20938667-20938894,20938990-20939221,20941598-20941797
Length = 565
Score = 27.9 bits (59), Expect = 6.0
Identities = 19/58 (32%), Positives = 26/58 (44%), Gaps = 1/58 (1%)
Frame = +1
Query: 34 AFFYLKIISSHCLRKPKFWQNCARSCPMSSAEVADNSVDPP-VKKRKLNTGEAQSNNT 204
AFF L I+ R P C ++S+++ N + PP V K L G SN T
Sbjct: 54 AFFLLIILQIPLFRVPCRAGTCTTPIQVTSSQLVSNEIFPPSVVKALLFPGAIASNLT 111
>07_02_0019 +
11877119-11879984,11880316-11880389,11881293-11881511,
11881557-11881679,11881759-11881859,11881938-11881990,
11882084-11882269,11882677-11882894
Length = 1279
Score = 27.5 bits (58), Expect = 7.9
Identities = 14/37 (37%), Positives = 22/37 (59%)
Frame = +1
Query: 352 IAKNVILGGVKSVTLHDEHTCTVGDLSSQFYLSENMI 462
+AK ++ V +L D +C VGD+S+ FYL M+
Sbjct: 726 LAKGLVPNCVTYTSLIDG-SCKVGDISNAFYLYNEML 761
>06_03_1359 +
29554078-29554375,29554470-29554655,29554768-29554923,
29555557-29555694,29555789-29555909,29556339-29556345
Length = 301
Score = 27.5 bits (58), Expect = 7.9
Identities = 17/58 (29%), Positives = 23/58 (39%), Gaps = 2/58 (3%)
Frame = +1
Query: 55 ISSHCLRKPKFWQNCARSCPMSS--AEVADNSVDPPVKKRKLNTGEAQSNNTAMANNG 222
++ C + CA CP+ + A A PP + N A N TA A NG
Sbjct: 7 VNPACPNAANPFHRCADYCPVPAPAAATAKPPPPPPSSRPAQNGTAAPQNGTAAAQNG 64
>01_06_1631 - 38760452-38760466,38760696-38760788,38760838-38761539
Length = 269
Score = 27.5 bits (58), Expect = 7.9
Identities = 22/71 (30%), Positives = 36/71 (50%), Gaps = 1/71 (1%)
Frame = +1
Query: 169 KLNTGEAQSNNTAMANNGARVDDEIDESLYSRQLYVLGHDAMRRMASSDVLISGLGGLG- 345
K + + Q N ++ E+D+ S +V+G+ RM SSD L +GLGG
Sbjct: 21 KWHVNKLQHKNRPWTMVDYQLGREVDKIFQSIAEFVVGNGKKPRMQSSD-LRTGLGGQHC 79
Query: 346 VEIAKNVILGG 378
+E+A ++ L G
Sbjct: 80 LEMAHSLDLCG 90
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,723,952
Number of Sequences: 37544
Number of extensions: 365116
Number of successful extensions: 1195
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1165
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1195
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1305140760
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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