Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0004_J19
         (568 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p...    26   0.99 
AY578812-1|AAT07317.1|  932|Anopheles gambiae wishful thinking p...    24   3.0  
AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            23   5.3  
AF080566-1|AAC31946.1|  308|Anopheles gambiae abdominal-A homeot...    23   6.9  
U03849-1|AAA53488.1|  388|Anopheles gambiae putative nucleic aci...    23   9.2  
AF515734-1|AAO14865.1| 1325|Anopheles gambiae xanthine dehydroge...    23   9.2  

>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
            protein.
          Length = 3325

 Score = 25.8 bits (54), Expect = 0.99
 Identities = 22/82 (26%), Positives = 33/82 (40%), Gaps = 1/82 (1%)
 Frame = +1

Query: 112  PMSSAEVADNSVDPPVKKRKLNTGEAQSNNTAMANNGARVDDEIDESLYSRQLYVLGHDA 291
            P+S   +AD+S      K +L    AQS  T     G R  +   E  Y+    V G   
Sbjct: 3145 PLSPDSLADDSSGENHNKHRLQRSRAQSRKTFRNRRGMR-SNNFSEPSYAIPT-VAGGAG 3202

Query: 292  MRRMASSDVLISGLGGL-GVEI 354
            +  + +      G GG+ GV +
Sbjct: 3203 LAMVGAGGSTAPGAGGVPGVAV 3224


>AY578812-1|AAT07317.1|  932|Anopheles gambiae wishful thinking
           protein.
          Length = 932

 Score = 24.2 bits (50), Expect = 3.0
 Identities = 13/34 (38%), Positives = 15/34 (44%)
 Frame = +1

Query: 136 DNSVDPPVKKRKLNTGEAQSNNTAMANNGARVDD 237
           D  V  P+K R L  G   + NT   N    VDD
Sbjct: 30  DAIVANPLKNRCLQFGTTSTTNTQQQNGQEFVDD 63


>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 23.4 bits (48), Expect = 5.3
 Identities = 11/37 (29%), Positives = 16/37 (43%)
 Frame = -1

Query: 316  HRN*PSGASHHDRARTAGENTNFRQSRHPRALHCSPL 206
            H N P G   HD      ++   R S+H    +C P+
Sbjct: 3090 HENTPEGEQVHDNTIQRYKSHYKRTSKHSMIENCYPV 3126


>AF080566-1|AAC31946.1|  308|Anopheles gambiae abdominal-A homeotic
           protein protein.
          Length = 308

 Score = 23.0 bits (47), Expect = 6.9
 Identities = 10/29 (34%), Positives = 18/29 (62%)
 Frame = +1

Query: 301 MASSDVLISGLGGLGVEIAKNVILGGVKS 387
           + S + L  GLGG+GV +  N+ + G ++
Sbjct: 280 IVSQNDLKLGLGGMGVGVGGNLSMMGAQT 308


>U03849-1|AAA53488.1|  388|Anopheles gambiae putative nucleic acid
           binding protein protein.
          Length = 388

 Score = 22.6 bits (46), Expect = 9.2
 Identities = 11/29 (37%), Positives = 14/29 (48%)
 Frame = -3

Query: 395 KVTDFTPPRMTFLAISTPRPPSPEIRTSE 309
           + T  TP     LA  T  PP PE  +S+
Sbjct: 317 RYTTRTPTTTHRLAARTSTPPDPETTSSQ 345


>AF515734-1|AAO14865.1| 1325|Anopheles gambiae xanthine dehydrogenase
            protein.
          Length = 1325

 Score = 22.6 bits (46), Expect = 9.2
 Identities = 13/37 (35%), Positives = 19/37 (51%)
 Frame = -3

Query: 137  SATSALDIGHERAQFCQNFGLRRQCEEIIFR*KKAVF 27
            S   A+DIG     F Q +GL    EE+++  +  VF
Sbjct: 1176 SINPAIDIGQIEGGFMQGYGL-FTLEEMVYSPQGQVF 1211


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 644,111
Number of Sequences: 2352
Number of extensions: 13617
Number of successful extensions: 64
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 63
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 64
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 53404389
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)