Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0004_J17
(573 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF160913-1|AAD46853.2| 340|Drosophila melanogaster LD07532p pro... 153 1e-37
AF132155-1|AAD34743.1| 330|Drosophila melanogaster unknown prot... 153 1e-37
AE013599-1338|AAM68717.1| 330|Drosophila melanogaster CG8996-PB... 153 1e-37
AE013599-1337|AAF58627.1| 330|Drosophila melanogaster CG8996-PA... 153 1e-37
BT011441-1|AAR99099.1| 525|Drosophila melanogaster RE55714p pro... 29 5.9
AF324425-1|AAG48327.1| 2618|Drosophila melanogaster transcriptio... 29 5.9
AF227215-1|AAF43172.1| 2618|Drosophila melanogaster jlkjlkj prot... 29 5.9
AF227214-1|AAF43021.1| 2618|Drosophila melanogaster Pap/DTRAP240... 29 5.9
AF226855-1|AAF36691.1| 2618|Drosophila melanogaster TRAP240 prot... 29 5.9
AE014296-3458|AAN12149.1| 2618|Drosophila melanogaster CG9936-PD... 29 5.9
AE014296-3457|AAN12148.1| 2618|Drosophila melanogaster CG9936-PC... 29 5.9
AE014134-350|AAF51296.1| 160|Drosophila melanogaster CG15383-PA... 29 5.9
>AF160913-1|AAD46853.2| 340|Drosophila melanogaster LD07532p
protein.
Length = 340
Score = 153 bits (372), Expect = 1e-37
Identities = 71/114 (62%), Positives = 94/114 (82%)
Frame = +3
Query: 42 MFSPSSRHLFLTAQLRRLQSTLVLAEHNNEVLSPATQNALTAAKKIGGEISVLVVGTKCG 221
MF+ ++R+L ++ L+R +STLV+AEHNNEVL+P T N ++AAKKIGG+++VLV GTKCG
Sbjct: 11 MFASNTRNLMRSSILQRCKSTLVVAEHNNEVLNPITLNTISAAKKIGGDVTVLVAGTKCG 70
Query: 222 PAADKIAKANGVAKVLVAESDAFKGFTAESITPLILATQKQFNFTHILAPAHCF 383
PA++ ++K +GV KVLVAE+ AF GFTAES+TPL+LA Q QF FTHILA A F
Sbjct: 71 PASEALSKVDGVTKVLVAENAAFNGFTAESLTPLVLAAQSQFKFTHILAGASAF 124
Score = 103 bits (246), Expect = 2e-22
Identities = 50/63 (79%), Positives = 57/63 (90%)
Frame = +1
Query: 376 TAFGKAILPRVAAKLDVSPITDIIGVKDANTFVRTIYAGNAILTLEAKDPVKVITVRSTA 555
+AFGK +LPRVAAKLDVSPI++II VK +TFVRTIYAGNAILTL++KD VKVITVRST
Sbjct: 122 SAFGKNVLPRVAAKLDVSPISEIIDVKSDDTFVRTIYAGNAILTLKSKDAVKVITVRSTN 181
Query: 556 FPP 564
FPP
Sbjct: 182 FPP 184
>AF132155-1|AAD34743.1| 330|Drosophila melanogaster unknown
protein.
Length = 330
Score = 153 bits (372), Expect = 1e-37
Identities = 71/114 (62%), Positives = 94/114 (82%)
Frame = +3
Query: 42 MFSPSSRHLFLTAQLRRLQSTLVLAEHNNEVLSPATQNALTAAKKIGGEISVLVVGTKCG 221
MF+ ++R+L ++ L+R +STLV+AEHNNEVL+P T N ++AAKKIGG+++VLV GTKCG
Sbjct: 1 MFASNTRNLMRSSILQRCKSTLVVAEHNNEVLNPITLNTISAAKKIGGDVTVLVAGTKCG 60
Query: 222 PAADKIAKANGVAKVLVAESDAFKGFTAESITPLILATQKQFNFTHILAPAHCF 383
PA++ ++K +GV KVLVAE+ AF GFTAES+TPL+LA Q QF FTHILA A F
Sbjct: 61 PASEALSKVDGVTKVLVAENAAFNGFTAESLTPLVLAAQSQFKFTHILAGASAF 114
Score = 103 bits (246), Expect = 2e-22
Identities = 50/63 (79%), Positives = 57/63 (90%)
Frame = +1
Query: 376 TAFGKAILPRVAAKLDVSPITDIIGVKDANTFVRTIYAGNAILTLEAKDPVKVITVRSTA 555
+AFGK +LPRVAAKLDVSPI++II VK +TFVRTIYAGNAILTL++KD VKVITVRST
Sbjct: 112 SAFGKNVLPRVAAKLDVSPISEIIDVKSDDTFVRTIYAGNAILTLKSKDAVKVITVRSTN 171
Query: 556 FPP 564
FPP
Sbjct: 172 FPP 174
>AE013599-1338|AAM68717.1| 330|Drosophila melanogaster CG8996-PB,
isoform B protein.
Length = 330
Score = 153 bits (372), Expect = 1e-37
Identities = 71/114 (62%), Positives = 94/114 (82%)
Frame = +3
Query: 42 MFSPSSRHLFLTAQLRRLQSTLVLAEHNNEVLSPATQNALTAAKKIGGEISVLVVGTKCG 221
MF+ ++R+L ++ L+R +STLV+AEHNNEVL+P T N ++AAKKIGG+++VLV GTKCG
Sbjct: 1 MFASNTRNLMRSSILQRCKSTLVVAEHNNEVLNPITLNTISAAKKIGGDVTVLVAGTKCG 60
Query: 222 PAADKIAKANGVAKVLVAESDAFKGFTAESITPLILATQKQFNFTHILAPAHCF 383
PA++ ++K +GV KVLVAE+ AF GFTAES+TPL+LA Q QF FTHILA A F
Sbjct: 61 PASEALSKVDGVTKVLVAENAAFNGFTAESLTPLVLAAQSQFKFTHILAGASAF 114
Score = 103 bits (246), Expect = 2e-22
Identities = 50/63 (79%), Positives = 57/63 (90%)
Frame = +1
Query: 376 TAFGKAILPRVAAKLDVSPITDIIGVKDANTFVRTIYAGNAILTLEAKDPVKVITVRSTA 555
+AFGK +LPRVAAKLDVSPI++II VK +TFVRTIYAGNAILTL++KD VKVITVRST
Sbjct: 112 SAFGKNVLPRVAAKLDVSPISEIIDVKSDDTFVRTIYAGNAILTLKSKDAVKVITVRSTN 171
Query: 556 FPP 564
FPP
Sbjct: 172 FPP 174
>AE013599-1337|AAF58627.1| 330|Drosophila melanogaster CG8996-PA,
isoform A protein.
Length = 330
Score = 153 bits (372), Expect = 1e-37
Identities = 71/114 (62%), Positives = 94/114 (82%)
Frame = +3
Query: 42 MFSPSSRHLFLTAQLRRLQSTLVLAEHNNEVLSPATQNALTAAKKIGGEISVLVVGTKCG 221
MF+ ++R+L ++ L+R +STLV+AEHNNEVL+P T N ++AAKKIGG+++VLV GTKCG
Sbjct: 1 MFASNTRNLMRSSILQRCKSTLVVAEHNNEVLNPITLNTISAAKKIGGDVTVLVAGTKCG 60
Query: 222 PAADKIAKANGVAKVLVAESDAFKGFTAESITPLILATQKQFNFTHILAPAHCF 383
PA++ ++K +GV KVLVAE+ AF GFTAES+TPL+LA Q QF FTHILA A F
Sbjct: 61 PASEALSKVDGVTKVLVAENAAFNGFTAESLTPLVLAAQSQFKFTHILAGASAF 114
Score = 103 bits (246), Expect = 2e-22
Identities = 50/63 (79%), Positives = 57/63 (90%)
Frame = +1
Query: 376 TAFGKAILPRVAAKLDVSPITDIIGVKDANTFVRTIYAGNAILTLEAKDPVKVITVRSTA 555
+AFGK +LPRVAAKLDVSPI++II VK +TFVRTIYAGNAILTL++KD VKVITVRST
Sbjct: 112 SAFGKNVLPRVAAKLDVSPISEIIDVKSDDTFVRTIYAGNAILTLKSKDAVKVITVRSTN 171
Query: 556 FPP 564
FPP
Sbjct: 172 FPP 174
>BT011441-1|AAR99099.1| 525|Drosophila melanogaster RE55714p
protein.
Length = 525
Score = 28.7 bits (61), Expect = 5.9
Identities = 14/60 (23%), Positives = 29/60 (48%)
Frame = -3
Query: 211 VPTTSTDISPPIFLAAVSAFWVAGDNTSLLCSAKTNVLCKRRSCAVKNRCLLLGENIFQC 32
+P + ++ P L +++ +A + ++++ C SC + RCLL G N +C
Sbjct: 470 IPRSDANVFPEYILPSITD--LASETSAVIVRV---AFCPEYSCTGQERCLLFGGNATKC 524
>AF324425-1|AAG48327.1| 2618|Drosophila melanogaster transcriptional
coactivator blindspot protein.
Length = 2618
Score = 28.7 bits (61), Expect = 5.9
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = -3
Query: 214 FVPTTSTDISPPIFLAAVSAFWV 146
F TTST + PP+ LAA W+
Sbjct: 85 FEMTTSTKVHPPLSLAAAKELWI 107
>AF227215-1|AAF43172.1| 2618|Drosophila melanogaster jlkjlkj
protein.
Length = 2618
Score = 28.7 bits (61), Expect = 5.9
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = -3
Query: 214 FVPTTSTDISPPIFLAAVSAFWV 146
F TTST + PP+ LAA W+
Sbjct: 85 FEMTTSTKVHPPLSLAAAKELWI 107
>AF227214-1|AAF43021.1| 2618|Drosophila melanogaster Pap/DTRAP240
protein.
Length = 2618
Score = 28.7 bits (61), Expect = 5.9
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = -3
Query: 214 FVPTTSTDISPPIFLAAVSAFWV 146
F TTST + PP+ LAA W+
Sbjct: 85 FEMTTSTKVHPPLSLAAAKELWI 107
>AF226855-1|AAF36691.1| 2618|Drosophila melanogaster TRAP240
protein.
Length = 2618
Score = 28.7 bits (61), Expect = 5.9
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = -3
Query: 214 FVPTTSTDISPPIFLAAVSAFWV 146
F TTST + PP+ LAA W+
Sbjct: 85 FEMTTSTKVHPPLSLAAAKELWI 107
>AE014296-3458|AAN12149.1| 2618|Drosophila melanogaster CG9936-PD,
isoform D protein.
Length = 2618
Score = 28.7 bits (61), Expect = 5.9
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = -3
Query: 214 FVPTTSTDISPPIFLAAVSAFWV 146
F TTST + PP+ LAA W+
Sbjct: 85 FEMTTSTKVHPPLSLAAAKELWI 107
>AE014296-3457|AAN12148.1| 2618|Drosophila melanogaster CG9936-PC,
isoform C protein.
Length = 2618
Score = 28.7 bits (61), Expect = 5.9
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = -3
Query: 214 FVPTTSTDISPPIFLAAVSAFWV 146
F TTST + PP+ LAA W+
Sbjct: 85 FEMTTSTKVHPPLSLAAAKELWI 107
>AE014134-350|AAF51296.1| 160|Drosophila melanogaster CG15383-PA
protein.
Length = 160
Score = 28.7 bits (61), Expect = 5.9
Identities = 22/74 (29%), Positives = 33/74 (44%)
Frame = +3
Query: 129 EVLSPATQNALTAAKKIGGEISVLVVGTKCGPAADKIAKANGVAKVLVAESDAFKGFTAE 308
E L Q+A ++K ++ V V+ + C P+A + NG AESD
Sbjct: 37 EELVQHQQSASGSSKSWDVDVDVDVLLSVCAPSALRACAINGEKSQKGAESDEDAAVEKW 96
Query: 309 SITPLILATQKQFN 350
PL+LAT F+
Sbjct: 97 RRLPLLLATVPLFH 110
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,733,214
Number of Sequences: 53049
Number of extensions: 472255
Number of successful extensions: 1096
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1069
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1096
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2255362491
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -