Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0004_J16
         (574 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calc...    24   3.1  
AY334011-1|AAR01136.1|  188|Anopheles gambiae beta-tubulin protein.    24   3.1  
AY334010-1|AAR01135.1|  188|Anopheles gambiae beta-tubulin protein.    24   3.1  
AY334009-1|AAR01134.1|  188|Anopheles gambiae beta-tubulin protein.    24   3.1  
AY334008-1|AAR01133.1|  188|Anopheles gambiae beta-tubulin protein.    24   3.1  
AF295693-1|AAL55241.1|  786|Anopheles gambiae polyprotein protein.     23   5.3  
AY330182-1|AAQ16288.1|  181|Anopheles gambiae odorant-binding pr...    23   7.1  
AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcript...    23   9.3  

>EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calcium
           channel alpha2-delta subunit 1 protein.
          Length = 1256

 Score = 24.2 bits (50), Expect = 3.1
 Identities = 10/25 (40%), Positives = 16/25 (64%)
 Frame = +2

Query: 326 ATMGSLYQEHHDEDFFLYIAFSDEN 400
           AT  ++     D+DFF  I+FSD++
Sbjct: 290 ATASAILDTLGDDDFFNLISFSDQS 314


>AY334011-1|AAR01136.1|  188|Anopheles gambiae beta-tubulin protein.
          Length = 188

 Score = 24.2 bits (50), Expect = 3.1
 Identities = 10/30 (33%), Positives = 15/30 (50%)
 Frame = +2

Query: 119 KIRRKYPDRVPVIVEKAPKARLGDLDKKKY 208
           KIR +YPDR+       P  ++ D   + Y
Sbjct: 50  KIREEYPDRIMNTYSVVPSPKVSDTVVEPY 79


>AY334010-1|AAR01135.1|  188|Anopheles gambiae beta-tubulin protein.
          Length = 188

 Score = 24.2 bits (50), Expect = 3.1
 Identities = 10/30 (33%), Positives = 15/30 (50%)
 Frame = +2

Query: 119 KIRRKYPDRVPVIVEKAPKARLGDLDKKKY 208
           KIR +YPDR+       P  ++ D   + Y
Sbjct: 50  KIREEYPDRIMNTYSVVPSPKVSDTVVEPY 79


>AY334009-1|AAR01134.1|  188|Anopheles gambiae beta-tubulin protein.
          Length = 188

 Score = 24.2 bits (50), Expect = 3.1
 Identities = 10/30 (33%), Positives = 15/30 (50%)
 Frame = +2

Query: 119 KIRRKYPDRVPVIVEKAPKARLGDLDKKKY 208
           KIR +YPDR+       P  ++ D   + Y
Sbjct: 50  KIREEYPDRIMNTYSVVPSPKVSDTVVEPY 79


>AY334008-1|AAR01133.1|  188|Anopheles gambiae beta-tubulin protein.
          Length = 188

 Score = 24.2 bits (50), Expect = 3.1
 Identities = 10/30 (33%), Positives = 15/30 (50%)
 Frame = +2

Query: 119 KIRRKYPDRVPVIVEKAPKARLGDLDKKKY 208
           KIR +YPDR+       P  ++ D   + Y
Sbjct: 50  KIREEYPDRIMNTYSVVPSPKVSDTVVEPY 79


>AF295693-1|AAL55241.1|  786|Anopheles gambiae polyprotein protein.
          Length = 786

 Score = 23.4 bits (48), Expect = 5.3
 Identities = 7/35 (20%), Positives = 21/35 (60%)
 Frame = -1

Query: 379 VEKEILVVMLLVERTHSCRCWWNHIVHEKEKRVLG 275
           + ++ ++  ++ E T +C+  W+H +  ++  V+G
Sbjct: 258 IAQDRVMKSVVKEHTKNCQHTWHHRLEHRDPAVIG 292


>AY330182-1|AAQ16288.1|  181|Anopheles gambiae odorant-binding
           protein AgamOBP56 protein.
          Length = 181

 Score = 23.0 bits (47), Expect = 7.1
 Identities = 11/38 (28%), Positives = 20/38 (52%)
 Frame = -1

Query: 451 KYNKSNI*NFKELISINIFIRKCYVEKEILVVMLLVER 338
           KY   N  N + +  I+   ++C++E E++  M  V R
Sbjct: 32  KYKCCNDANTENMEKIHEIKKQCFMEMEVICAMECVGR 69


>AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1173

 Score = 22.6 bits (46), Expect = 9.3
 Identities = 12/34 (35%), Positives = 15/34 (44%)
 Frame = -3

Query: 404 KHFHQKMLCRERNPRRDAPGRENP*LQMLVESHC 303
           + FH++     R PR    GR     Q L ES C
Sbjct: 229 RRFHRQSPAHRRKPRWRRAGRRWKVGQFLPESFC 262


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 519,397
Number of Sequences: 2352
Number of extensions: 9691
Number of successful extensions: 18
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 54245403
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)