Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0004_J15
         (568 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.     24   0.93 
AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    24   1.2  
AY526236-1|AAS20469.1|   85|Apis mellifera epoxide hydrolase pro...    21   6.5  
AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine beta-sy...    21   6.5  
L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.        21   8.6  

>EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.
          Length = 570

 Score = 24.2 bits (50), Expect = 0.93
 Identities = 9/13 (69%), Positives = 10/13 (76%)
 Frame = -3

Query: 245 DSPVEAIASWANG 207
           D  VEA+A WANG
Sbjct: 338 DKNVEALAKWANG 350


>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 14/56 (25%), Positives = 23/56 (41%)
 Frame = +1

Query: 352 KLANKVYIANGNELNDQFAVVSRDVFNSEVQNLNFGKNEEAANIINTWVEDHTNKR 519
           KL  K      N  ND +     +  NS   ++ F +N+E    IN    D+ + +
Sbjct: 125 KLDQKFIFPQENNYNDNYFYSKSNGSNSSNSDVLFKQNKEEEQTINRKNSDYLDNQ 180


>AY526236-1|AAS20469.1|   85|Apis mellifera epoxide hydrolase
           protein.
          Length = 85

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 6/13 (46%), Positives = 11/13 (84%)
 Frame = +2

Query: 506 TPINVSNIWWILV 544
           T +N+SN++W+ V
Sbjct: 30  TSLNLSNLFWLFV 42


>AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine
           beta-synthase protein.
          Length = 504

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +2

Query: 125 NSPHVCLMKSSRKTQI 172
           NSPH C  K+   T+I
Sbjct: 20  NSPHTCRTKNGDYTKI 35


>L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.
          Length = 382

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 9/31 (29%), Positives = 14/31 (45%)
 Frame = +1

Query: 448 LNFGKNEEAANIINTWVEDHTNKRIKHLVDP 540
           L F +  E   I+  W++    + I  L DP
Sbjct: 59  LRFEEVSEKYGILQNWMDKFRGEEIAILYDP 89


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.313    0.129    0.356 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 140,796
Number of Sequences: 438
Number of extensions: 2909
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 16440594
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)