Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0004_J12
(606 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_02_0058 + 7879859-7879951,7880844-7881078,7881165-7881535,788... 318 2e-87
03_05_0974 + 29324025-29324117,29325064-29325298,29325385-293257... 314 3e-86
07_03_0994 + 23190344-23190456,23191367-23191581,23191663-231918... 300 5e-82
03_02_0186 - 6243487-6243799,6243892-6244400,6244495-6244557,624... 208 3e-54
05_04_0306 + 20058640-20059159,20060406-20060819,20060921-200611... 151 6e-37
01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349 147 5e-36
06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379 145 3e-35
03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998 143 8e-35
03_01_0034 + 318432-318825,318902-319851 143 8e-35
02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467 142 2e-34
01_06_1060 + 34162161-34162554,34162613-34162675,34163262-341635... 132 3e-31
03_05_0575 + 25747813-25748206,25748567-25748614,25750296-257505... 124 5e-29
05_01_0412 - 3248405-3248458,3248533-3248637,3248950-3249078,324... 114 6e-26
04_01_0383 + 5085697-5085724,5085816-5085927,5087249-5087285,508... 31 0.71
01_01_0524 - 3845637-3845727,3845803-3845896,3846415-3846497,384... 30 1.6
12_01_0468 + 3661177-3661626 29 2.2
09_01_0060 - 942762-943448,943840-943867,944044-944077,944383-94... 29 2.2
08_02_1633 + 28392378-28393445 29 2.2
12_02_0667 + 21682386-21682944,21683042-21683201,21683419-216834... 29 2.9
05_07_0299 - 29073900-29073984,29074125-29074158,29074269-290743... 29 2.9
09_04_0445 - 17677126-17677512,17677608-17678564 29 3.8
06_01_0111 + 870781-871017,871194-871240,871681-871947,872196-87... 29 3.8
01_05_0685 + 24273331-24273569,24275429-24275465,24275739-242758... 29 3.8
12_02_0823 + 23461423-23462124 28 5.0
01_05_0346 + 21191542-21191783,21191988-21192072,21192159-211924... 28 5.0
08_01_0540 + 4691929-4692014,4692915-4693125,4693756-4693885,469... 25 5.4
05_06_0020 + 24976990-24977167,24978763-24978874,24979634-249797... 28 6.6
01_06_0638 - 30768546-30768779,30768908-30769017,30769301-307694... 28 6.6
11_06_0371 + 22774245-22774413,22774504-22774670,22775538-227756... 27 8.7
05_01_0162 - 1095020-1095202,1096114-1096188,1096939-1097039,109... 27 8.7
01_06_0734 + 31569017-31569358,31569832-31569906,31570009-315701... 27 8.7
>11_02_0058 +
7879859-7879951,7880844-7881078,7881165-7881535,
7881648-7882304
Length = 451
Score = 318 bits (781), Expect = 2e-87
Identities = 141/172 (81%), Positives = 154/172 (89%)
Frame = +1
Query: 91 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 270
MRECIS+H+GQAG+Q+GNACWELYCLEHGIQPDGQMP DKT+GGGDD+FNTFFSETGAGK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60
Query: 271 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 450
HVPRAVFVDLEPTV+DEVRTG YRQLFHPEQLI+GKEDAANN+ARGHYTIGKEIVDL LD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGDYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120
Query: 451 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIY 606
RIRKLAD CTGLQGFL+F+ LL+ERLSVDYGKKSKL F +Y
Sbjct: 121 RIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVY 172
>03_05_0974 +
29324025-29324117,29325064-29325298,29325385-29325755,
29325864-29326520
Length = 451
Score = 314 bits (772), Expect = 3e-86
Identities = 139/172 (80%), Positives = 153/172 (88%)
Frame = +1
Query: 91 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 270
MRECIS+H+GQAG+Q+GNACWELYCLEHGIQ DGQMP+D+T+GGGDD+FNTFFSETGAGK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQADGQMPSDRTVGGGDDAFNTFFSETGAGK 60
Query: 271 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 450
HVPRAVFVDLEPTV+DEVRTG YRQLFHPEQLI GKEDAANN+ARGHYTIGKEIVDL LD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGCYRQLFHPEQLINGKEDAANNFARGHYTIGKEIVDLCLD 120
Query: 451 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIY 606
RIRKLAD CTGLQGFL+F+ LL+ERLSVDYGKKSKL F +Y
Sbjct: 121 RIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVY 172
>07_03_0994 +
23190344-23190456,23191367-23191581,23191663-23191862,
23192420-23192928,23193048-23193363
Length = 450
Score = 300 bits (737), Expect = 5e-82
Identities = 132/172 (76%), Positives = 150/172 (87%)
Frame = +1
Query: 91 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 270
MRE IS+H+GQAG+Q+GNACWELYCLEHGI+PDG MP+D T+G D+FNTFFSETGAGK
Sbjct: 1 MREIISIHIGQAGIQVGNACWELYCLEHGIEPDGTMPSDTTVGVAHDAFNTFFSETGAGK 60
Query: 271 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 450
HVPRA+FVDLEPTV+DEVRTG+YRQLFHPEQLI+GKEDAANN+ARGHYT+GKEIVDL LD
Sbjct: 61 HVPRAIFVDLEPTVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLD 120
Query: 451 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIY 606
R+RKLAD CTGLQGFL+F+ LL+ERLSVDYGKKSKL F IY
Sbjct: 121 RVRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIY 172
>03_02_0186 -
6243487-6243799,6243892-6244400,6244495-6244557,
6245482-6245681,6246125-6246519,6246776-6246888
Length = 530
Score = 208 bits (508), Expect = 3e-54
Identities = 95/135 (70%), Positives = 111/135 (82%)
Frame = +1
Query: 202 TDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKE 381
+D T G D+FNTFFSET +GKHVPRA+FVDLEPTV+DEV+TG YRQLFHPEQLI+ KE
Sbjct: 98 SDTTPGIARDAFNTFFSETSSGKHVPRALFVDLEPTVIDEVKTGPYRQLFHPEQLISYKE 157
Query: 382 DAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERL 561
DAANN+ARGHYT+G+E+VDL LDR+RKLAD CTGLQGFL+F+ LL+ERL
Sbjct: 158 DAANNFARGHYTVGREVVDLCLDRLRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERL 217
Query: 562 SVDYGKKSKLEFAIY 606
SVDYG+KSKL F IY
Sbjct: 218 SVDYGRKSKLGFTIY 232
Score = 81.4 bits (192), Expect = 5e-16
Identities = 31/39 (79%), Positives = 36/39 (92%)
Frame = +1
Query: 91 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTD 207
MRE IS+H+GQAG+Q+GN+CWELYCLEHGIQPDG MP D
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGLMPRD 39
>05_04_0306 +
20058640-20059159,20060406-20060819,20060921-20061190,
20062179-20062849
Length = 624
Score = 151 bits (365), Expect = 6e-37
Identities = 70/178 (39%), Positives = 104/178 (58%)
Frame = +1
Query: 73 QKTQYKMRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFS 252
+K + KMRE + + GQ G QIG+ WE+ C EHGI P G+ + + N +++
Sbjct: 175 KKGEEKMREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRYAGTSDLQL--ERVNVYYN 232
Query: 253 ETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEI 432
E G+ VPRAV +DLEP +D VRTG Y Q+F P+ + G+ A NN+A+GHYT G E+
Sbjct: 233 EASCGRFVPRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL 292
Query: 433 VDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIY 606
+D VLD +RK A+ C LQGF + H LL+ ++ +Y + L F+++
Sbjct: 293 IDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVF 350
>01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349
Length = 447
Score = 147 bits (357), Expect = 5e-36
Identities = 70/175 (40%), Positives = 102/175 (58%), Gaps = 3/175 (1%)
Frame = +1
Query: 91 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGD---DSFNTFFSETG 261
MRE + + GQ G QIG+ WE+ C EHGI P G+ +G D + N +++E
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRY-----VGTSDLQLERVNVYYNEAS 55
Query: 262 AGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDL 441
G+ VPRAV +DLEP +D VRTG Y Q+F P+ + G+ A NN+A+GHYT G E++D
Sbjct: 56 CGRFVPRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDS 115
Query: 442 VLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIY 606
VLD +RK A+ C LQGF + H LL+ ++ +Y + L F+++
Sbjct: 116 VLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVF 170
>06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379
Length = 446
Score = 145 bits (351), Expect = 3e-35
Identities = 67/172 (38%), Positives = 100/172 (58%)
Frame = +1
Query: 91 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 270
MRE + + GQ G QIG WE+ C EHGI G+ D + + N +++E G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDLQL--ERINVYYNEASGGR 58
Query: 271 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 450
+VPRAV +DLEP +D VR+G Y Q+F P+ + G+ A NN+A+GHYT G E++D VLD
Sbjct: 59 YVPRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD 118
Query: 451 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIY 606
+RK A+ C LQGF + H LL+ ++ +Y + L F+++
Sbjct: 119 VVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVF 170
>03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998
Length = 444
Score = 143 bits (347), Expect = 8e-35
Identities = 65/172 (37%), Positives = 100/172 (58%)
Frame = +1
Query: 91 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 270
MRE + + GQ G QIG WE+ C EHG+ G+ D + + N +++E G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGVDATGRYAGDSDLQL--ERINVYYNEASGGR 58
Query: 271 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 450
+VPRAV +DLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E++D VLD
Sbjct: 59 YVPRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD 118
Query: 451 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIY 606
+RK A+ C LQGF + H LL+ ++ +Y + L F+++
Sbjct: 119 VVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVF 170
>03_01_0034 + 318432-318825,318902-319851
Length = 447
Score = 143 bits (347), Expect = 8e-35
Identities = 66/172 (38%), Positives = 98/172 (56%)
Frame = +1
Query: 91 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 270
MRE + + GQ G QIG WE+ C EHGI G+ D + + N +++E G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDATGRYDGDSDLQL--ERVNVYYNEASCGR 58
Query: 271 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 450
VPRAV +DLEP +D VR+G Y +F P+ + G+ A NN+A+GHYT G E++D VLD
Sbjct: 59 FVPRAVLMDLEPGTMDSVRSGPYGHIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLD 118
Query: 451 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIY 606
+RK A+ C LQGF + H LL+ ++ +Y + L F+++
Sbjct: 119 VVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVF 170
>02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467
Length = 447
Score = 142 bits (344), Expect = 2e-34
Identities = 66/172 (38%), Positives = 99/172 (57%)
Frame = +1
Query: 91 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 270
MRE + + GQ G QIG WE+ C EHGI G+ D + + N +++E G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDLQL--ERINVYYNEASGGR 58
Query: 271 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 450
VPRAV +DLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E++D VLD
Sbjct: 59 FVPRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD 118
Query: 451 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIY 606
+RK A+ C LQGF + H LL+ ++ +Y + L F+++
Sbjct: 119 VVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVF 170
>01_06_1060 +
34162161-34162554,34162613-34162675,34163262-34163531,
34163944-34164623
Length = 468
Score = 132 bits (318), Expect = 3e-31
Identities = 61/134 (45%), Positives = 84/134 (62%)
Frame = +1
Query: 91 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 270
MRE + + GQ G QIG WE+ C EHGI P G+ + + + N +++E G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCDEHGIDPTGRYTGNSDLQL--ERVNVYYNEASCGR 58
Query: 271 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 450
VPRAV +DLEP +D VRTG Y Q+F P+ + G+ A NN+A+GHYT G E++D VLD
Sbjct: 59 FVPRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD 118
Query: 451 RIRKLADQCTGLQG 492
+RK A+ C LQG
Sbjct: 119 VVRKEAENCDCLQG 132
>03_05_0575 +
25747813-25748206,25748567-25748614,25750296-25750565,
25750658-25751334
Length = 462
Score = 124 bits (299), Expect = 5e-29
Identities = 66/188 (35%), Positives = 97/188 (51%), Gaps = 16/188 (8%)
Frame = +1
Query: 91 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 270
MRE + + GQ G QIG WE+ C EHG+ P G T + N +F+E G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICGEHGVDPTGTYTG--TSPQQLERINVYFNEASGGR 58
Query: 271 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 450
HVPRAV +DLEP +D +R+G +F P+ + G+ A NN+A+GHYT G E++D VLD
Sbjct: 59 HVPRAVLMDLEPGTMDSLRSGPIGGIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD 118
Query: 451 RIRKLADQCTGLQ----------------GFLIFHXXXXXXXXXXXXLLMERLSVDYGKK 582
+RK A+ C LQ GF + H LL+ ++ +Y +
Sbjct: 119 VVRKEAENCDCLQDNRVIRQLGSIDNEQSGFQVCHSLGGGTGSGMGTLLISKIREEYPDR 178
Query: 583 SKLEFAIY 606
L F+++
Sbjct: 179 MMLTFSVF 186
>05_01_0412 -
3248405-3248458,3248533-3248637,3248950-3249078,
3249279-3249353,3249520-3249624,3249714-3249767,
3249970-3250370,3250583-3250694,3250886-3251086,
3251844-3251972
Length = 454
Score = 114 bits (274), Expect = 6e-26
Identities = 60/173 (34%), Positives = 95/173 (54%), Gaps = 2/173 (1%)
Frame = +1
Query: 94 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKH 273
RE I++ VGQ G QIG W+ CLEHGI DG + T GG D + FF + +
Sbjct: 3 REIITIQVGQCGNQIGMEFWKQLCLEHGIGKDGLLEDFATQGG--DRKDVFFYQADDQHY 60
Query: 274 VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKE--DAANNYARGHYTIGKEIVDLVL 447
+PRA+ VDLEP V++ ++ YR L++ E + + A NN+A G++ G+++VD ++
Sbjct: 61 IPRALLVDLEPRVINGIQNSEYRNLYNHENIFVAEHGGGAGNNWASGYHQ-GEQVVDDIM 119
Query: 448 DRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIY 606
D I + AD L+GF++ H L+E L+ Y KK ++++
Sbjct: 120 DMIDREADGSDSLEGFVLCHSIAGGTGSGMGSYLLETLNDRYSKKLVQTYSVF 172
>04_01_0383 +
5085697-5085724,5085816-5085927,5087249-5087285,
5087512-5087581,5087704-5087808,5088022-5088172,
5088257-5088339,5089152-5089372,5089465-5089501,
5089668-5089753
Length = 309
Score = 31.1 bits (67), Expect = 0.71
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = -2
Query: 230 SSPPPMVLSVGI*PSGWMPCSRQYSSQ 150
S P P+ LS I SGW+PCSR S+
Sbjct: 147 SMPYPITLSAVISLSGWLPCSRTLRSK 173
>01_01_0524 -
3845637-3845727,3845803-3845896,3846415-3846497,
3846587-3846737,3847113-3847217,3847351-3847420,
3847551-3847587,3848155-3848257,3848441-3848480
Length = 257
Score = 29.9 bits (64), Expect = 1.6
Identities = 11/26 (42%), Positives = 18/26 (69%)
Frame = -2
Query: 227 SPPPMVLSVGI*PSGWMPCSRQYSSQ 150
+P P+ LSV + SGW+PC+R ++
Sbjct: 149 NPYPVNLSVSVGLSGWLPCARSLKNK 174
>12_01_0468 + 3661177-3661626
Length = 149
Score = 29.5 bits (63), Expect = 2.2
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = -1
Query: 561 ESLHEERSETRTGATTERVEDEESLEACALVSEFADAVEDQ 439
E LH + E E VE+EE +E +V E + +E++
Sbjct: 56 EQLHSDEEEEEEEEEEEEVEEEEDIEEEEVVEEEEEEIEEE 96
>09_01_0060 -
942762-943448,943840-943867,944044-944077,944383-944437
Length = 267
Score = 29.5 bits (63), Expect = 2.2
Identities = 19/51 (37%), Positives = 20/51 (39%), Gaps = 2/51 (3%)
Frame = -3
Query: 526 RCHHRTSGR*GIPGGLCIGQRVCGCGRGPSLRFPFQ--WCSDHEHSCLRHP 380
RCH RT R G G GQRV G G R W +D HP
Sbjct: 87 RCHRRTRWRAGGEGSSGGGQRVSSFGSGGRQRASSSVVWVADQSAPIADHP 137
>08_02_1633 + 28392378-28393445
Length = 355
Score = 29.5 bits (63), Expect = 2.2
Identities = 10/27 (37%), Positives = 13/27 (48%)
Frame = -3
Query: 454 CGRGPSLRFPFQWCSDHEHSCLRHPPY 374
C P L P W + +H C HPP+
Sbjct: 261 CPNHPPLTTPRSWDAHDDHDCPNHPPH 287
>12_02_0667 +
21682386-21682944,21683042-21683201,21683419-21683467,
21683570-21683683,21683794-21684294,21684594-21684980,
21685074-21685172,21685380-21685478,21685817-21685890,
21686387-21687023
Length = 892
Score = 29.1 bits (62), Expect = 2.9
Identities = 18/75 (24%), Positives = 36/75 (48%)
Frame = -1
Query: 414 VVTTSIVVCGILLTSDKLFWMKQLSVCASADLVNYSGFKIDEDGTGNVLASSGLAEERVE 235
+V + VV G+ L ++ +W + + + ++ Y+G +I L S G R+E
Sbjct: 568 IVYIAFVVHGVCLYINRTWWKQTTWMYLAIPILLYAGERIFR-----ALRSHGFTTVRIE 622
Query: 234 GVVSTPDGLVSWHLT 190
V P +++ H+T
Sbjct: 623 KVAIYPGNVIAIHMT 637
>05_07_0299 -
29073900-29073984,29074125-29074158,29074269-29074351,
29074457-29074607,29074853-29074957,29075099-29075168,
29075374-29075410,29076732-29076843,29076956-29076983
Length = 234
Score = 29.1 bits (62), Expect = 2.9
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = -2
Query: 224 PPPMVLSVGI*PSGWMPCSR 165
P P+ LS I SGW+PCSR
Sbjct: 149 PYPITLSAVISLSGWLPCSR 168
>09_04_0445 - 17677126-17677512,17677608-17678564
Length = 447
Score = 28.7 bits (61), Expect = 3.8
Identities = 14/41 (34%), Positives = 20/41 (48%)
Frame = +3
Query: 330 WHIQTVVSSRTTYHW*GGCRKQLCSWSLHHWKGNRRLGPRP 452
WH + + ++H GCR + W+L H G RLG P
Sbjct: 157 WHGISALIPFASWHARSGCRARPARWALFH-HGEVRLGMSP 196
>06_01_0111 +
870781-871017,871194-871240,871681-871947,872196-872848,
872997-873043,873124-873169,873371-873416,873592-873720,
873822-873942
Length = 530
Score = 28.7 bits (61), Expect = 3.8
Identities = 21/59 (35%), Positives = 29/59 (49%)
Frame = +2
Query: 134 RSEMPAGSCIALSTASNLMVRCQLTRPSGVETTPSTRSSARPELASTFPVPSSSILNPL 310
+S MP + + TA+ L R LT S V + P + + P TF PSSS +PL
Sbjct: 191 QSNMPPITTETIETANKL--RQDLTNASTVNSAPMSNT---PSQTPTFVSPSSSSTSPL 244
>01_05_0685 +
24273331-24273569,24275429-24275465,24275739-24275808,
24275978-24276082,24276205-24276355,24276454-24276536,
24276619-24276712,24276796-24276883
Length = 288
Score = 28.7 bits (61), Expect = 3.8
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = -2
Query: 218 PMVLSVGI*PSGWMPCSRQYSSQ 150
P+ LS I SGW+PCSR S+
Sbjct: 184 PVTLSAVIGLSGWLPCSRTLKSK 206
>12_02_0823 + 23461423-23462124
Length = 233
Score = 28.3 bits (60), Expect = 5.0
Identities = 19/58 (32%), Positives = 25/58 (43%), Gaps = 3/58 (5%)
Frame = +2
Query: 125 PESRSEMPAGSCIAL--STASNLMVRCQLTRPSGVETTPSTRSSARP-ELASTFPVPS 289
P S+ + AG + TA RC LTR +G + P + P EL F PS
Sbjct: 159 PRSQRVVGAGGAVVACRGTADYFKARCPLTRTTGSDVEPVPQHCLAPGELKVVFCQPS 216
>01_05_0346 +
21191542-21191783,21191988-21192072,21192159-21192422,
21192518-21192820,21193695-21193799,21193916-21194020,
21194613-21194712,21195614-21195933,21196183-21196359,
21196432-21196560,21196592-21196636,21196851-21197078
Length = 700
Score = 28.3 bits (60), Expect = 5.0
Identities = 14/44 (31%), Positives = 23/44 (52%)
Frame = +2
Query: 260 ELASTFPVPSSSILNPL*LTRSALAHTDSCFIQNNLSLVRRMPQ 391
E A++ P+P+S L+P A A +C + N+S R P+
Sbjct: 2 EAAASLPLPASRFLSPPPHPTPAAAAAAACCSRRNISCARAAPR 45
>08_01_0540 + 4691929-4692014,4692915-4693125,4693756-4693885,
4695422-4696072,4696179-4696395,4697040-4697111,
4697167-4697257,4697367-4698363,4698914-4699044,
4699584-4699802,4700110-4700805,4700912-4701121,
4701606-4701710
Length = 1271
Score = 24.6 bits (51), Expect(2) = 5.4
Identities = 11/73 (15%), Positives = 31/73 (42%)
Frame = -1
Query: 390 CGILLTSDKLFWMKQLSVCASADLVNYSGFKIDEDGTGNVLASSGLAEERVEGVVSTPDG 211
CG L++D +F L +C S +++ D + ++ + +++ + +
Sbjct: 1035 CGNTLSTDSVFSSGALRICMSGVSSSHASGSSSLDDESSSISQTSYISSKIQAAIDILNS 1094
Query: 210 LVSWHLTIRLDAV 172
+++ + D V
Sbjct: 1095 IINTYALTDSDTV 1107
Score = 21.8 bits (44), Expect(2) = 5.4
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = -1
Query: 432 DFLSNGVVTTSIVVCGILLTSD 367
D L GV+ +S + G+LL D
Sbjct: 979 DNLITGVIQSSFAIFGLLLRQD 1000
>05_06_0020 + 24976990-24977167,24978763-24978874,24979634-24979722,
24979801-24979869,24979953-24980082,24980506-24980664,
24980767-24981127,24981343-24981452,24981753-24981909,
24983336-24983748,24983828-24984020,24984384-24986198
Length = 1261
Score = 27.9 bits (59), Expect = 6.6
Identities = 17/54 (31%), Positives = 26/54 (48%)
Frame = +2
Query: 137 SEMPAGSCIALSTASNLMVRCQLTRPSGVETTPSTRSSARPELASTFPVPSSSI 298
SE+P S + S A ++ PS E T + ++RP A FP P S++
Sbjct: 868 SELPQTSTTSNSEAQEETAAIRVASPSVSEVTVT---ASRPSSAPVFPAPRSTV 918
>01_06_0638 -
30768546-30768779,30768908-30769017,30769301-30769490,
30769842-30769914,30770007-30770063,30770147-30770211,
30770278-30770488,30770568-30770650,30771123-30771158,
30771611-30771713,30771813-30771899,30772210-30772403
Length = 480
Score = 27.9 bits (59), Expect = 6.6
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = -1
Query: 489 LEACALVSEFADAVEDQVYDFLS 421
+ A AL+ E D VED + DFLS
Sbjct: 103 IHALALLDEIPDDVEDDIVDFLS 125
>11_06_0371 +
22774245-22774413,22774504-22774670,22775538-22775631,
22775723-22775871,22775950-22776042,22776167-22776235,
22776236-22776415,22776465-22776518,22776739-22776905,
22777180-22777314,22777386-22777479,22777567-22777848
Length = 550
Score = 27.5 bits (58), Expect = 8.7
Identities = 15/59 (25%), Positives = 32/59 (54%)
Frame = -1
Query: 459 ADAVEDQVYDFLSNGVVTTSIVVCGILLTSDKLFWMKQLSVCASADLVNYSGFKIDEDG 283
A+ + +Q+Y F + V T +V C ++ K +++K +V LVN++ ++ + G
Sbjct: 223 AELLYEQLYFF--SLVHFTKVVYCHFQVSGSKFYYLKNEAVLLEMALVNWAITEVSKKG 279
>05_01_0162 -
1095020-1095202,1096114-1096188,1096939-1097039,
1097467-1097577,1097704-1097807,1098260-1098493,
1098583-1099304
Length = 509
Score = 27.5 bits (58), Expect = 8.7
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = +1
Query: 187 DGQMPTDKTIGGGDDSFNTFFSETGAGKHVPR 282
DG++PTD G D N S+ A + P+
Sbjct: 343 DGELPTDAAAQGADVDLNLRISQPAASQQSPK 374
>01_06_0734 +
31569017-31569358,31569832-31569906,31570009-31570159,
31570716-31570784,31570864-31571036,31571474-31571611,
31571747-31571872,31571951-31572049,31573175-31573298,
31573465-31573528,31573798-31573852,31573951-31574075,
31574228-31574301,31574436-31574485,31574722-31574808,
31574897-31574947,31575025-31575108,31575400-31575498
Length = 661
Score = 27.5 bits (58), Expect = 8.7
Identities = 25/95 (26%), Positives = 42/95 (44%)
Frame = -1
Query: 420 NGVVTTSIVVCGILLTSDKLFWMKQLSVCASADLVNYSGFKIDEDGTGNVLASSGLAEER 241
+GVV V G+ T D + ++ V S ++ G G++++ +GLA
Sbjct: 290 SGVVRVGDKVHGLRSTDDGVQKIEDGKVVKLMKKKGTSMVIVEAAGAGDIISMAGLAAPA 349
Query: 240 VEGVVSTPDGLVSWHLTIRLDAVLKAIQLPAGISD 136
+ VS D L + TI LD I + G++D
Sbjct: 350 IGHTVSNSDILTALP-TIELDP--PTISMTFGVND 381
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,195,113
Number of Sequences: 37544
Number of extensions: 454328
Number of successful extensions: 1570
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 1503
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1559
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1442939384
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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