Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0004_J11
(549 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC068524-1|AAH68524.1| 76|Homo sapiens zinc finger protein 706... 81 2e-15
BC015925-1|AAH15925.1| 76|Homo sapiens zinc finger protein 706... 81 2e-15
AF275809-1|AAG23820.1| 76|Homo sapiens PNAS-113 protein. 81 2e-15
AF275802-1|AAG23816.1| 76|Homo sapiens PNAS-106 protein. 79 8e-15
BC107417-1|AAI07418.1| 433|Homo sapiens ZFR protein protein. 36 0.071
BC030540-1|AAH30540.1| 615|Homo sapiens ZFR protein protein. 36 0.071
AJ314790-1|CAC40818.1| 1057|Homo sapiens putative zinc finger pr... 36 0.071
AB029009-1|BAA83038.1| 902|Homo sapiens KIAA1086 protein protein. 31 2.0
U60179-1|AAC50653.1| 366|Homo sapiens growth hormone secretagog... 30 4.6
BC113547-1|AAI13548.1| 366|Homo sapiens growth hormone secretag... 30 4.6
BC035589-1|AAH35589.1| 1832|Homo sapiens zinc finger protein 646... 30 4.6
AY429112-1|AAR07907.1| 366|Homo sapiens growth hormone secretag... 30 4.6
AF369786-1|AAK71539.1| 366|Homo sapiens growth hormone secretag... 30 4.6
AB002294-1|BAA20756.2| 1838|Homo sapiens KIAA0296 protein. 30 4.6
AY534241-1|AAT07090.1| 650|Homo sapiens XK-related protein 4 pr... 29 8.1
>BC068524-1|AAH68524.1| 76|Homo sapiens zinc finger protein 706
protein.
Length = 76
Score = 81.4 bits (192), Expect = 2e-15
Identities = 38/74 (51%), Positives = 45/74 (60%)
Frame = +2
Query: 227 MARGHQKIXXXXXXXXXXXXXXXXXGHSATDQKKAAQKALVHVCAVCKAQMPDPKTYKQH 406
MARG QKI GH DQK AA+ AL++ C VC+ QMPDPKT+KQH
Sbjct: 1 MARGQQKIQSQQKNAKKQAGQKKKQGH---DQKAAAKAALIYTCTVCRTQMPDPKTFKQH 57
Query: 407 FENKHPKNDLPEDL 448
FE+KHPK LP +L
Sbjct: 58 FESKHPKTPLPPEL 71
>BC015925-1|AAH15925.1| 76|Homo sapiens zinc finger protein 706
protein.
Length = 76
Score = 81.4 bits (192), Expect = 2e-15
Identities = 38/74 (51%), Positives = 45/74 (60%)
Frame = +2
Query: 227 MARGHQKIXXXXXXXXXXXXXXXXXGHSATDQKKAAQKALVHVCAVCKAQMPDPKTYKQH 406
MARG QKI GH DQK AA+ AL++ C VC+ QMPDPKT+KQH
Sbjct: 1 MARGQQKIQSQQKNAKKQAGQKKKQGH---DQKAAAKAALIYTCTVCRTQMPDPKTFKQH 57
Query: 407 FENKHPKNDLPEDL 448
FE+KHPK LP +L
Sbjct: 58 FESKHPKTPLPPEL 71
>AF275809-1|AAG23820.1| 76|Homo sapiens PNAS-113 protein.
Length = 76
Score = 81.4 bits (192), Expect = 2e-15
Identities = 38/74 (51%), Positives = 45/74 (60%)
Frame = +2
Query: 227 MARGHQKIXXXXXXXXXXXXXXXXXGHSATDQKKAAQKALVHVCAVCKAQMPDPKTYKQH 406
MARG QKI GH DQK AA+ AL++ C VC+ QMPDPKT+KQH
Sbjct: 1 MARGQQKIQSQQKNAKKQAGQKKKQGH---DQKAAAKAALIYTCTVCRTQMPDPKTFKQH 57
Query: 407 FENKHPKNDLPEDL 448
FE+KHPK LP +L
Sbjct: 58 FESKHPKTPLPPEL 71
>AF275802-1|AAG23816.1| 76|Homo sapiens PNAS-106 protein.
Length = 76
Score = 79.4 bits (187), Expect = 8e-15
Identities = 37/74 (50%), Positives = 45/74 (60%)
Frame = +2
Query: 227 MARGHQKIXXXXXXXXXXXXXXXXXGHSATDQKKAAQKALVHVCAVCKAQMPDPKTYKQH 406
MARG QKI GH+ QK AA+ AL++ C VC+ QMPDPKT+KQH
Sbjct: 1 MARGQQKIQSQQKKAKKQAGQKKKQGHA---QKAAAKAALIYTCTVCRTQMPDPKTFKQH 57
Query: 407 FENKHPKNDLPEDL 448
FE+KHPK LP +L
Sbjct: 58 FESKHPKTPLPPEL 71
>BC107417-1|AAI07418.1| 433|Homo sapiens ZFR protein protein.
Length = 433
Score = 36.3 bits (80), Expect = 0.071
Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = +2
Query: 323 KKAAQKALVHVCAVCKAQMPDPKTYKQHFE-NKHPKND 433
K+ + +H C VCK P+TYK+H E KH K +
Sbjct: 322 KQPPKPPQIHYCDVCKISCAGPQTYKEHLEGQKHKKKE 359
>BC030540-1|AAH30540.1| 615|Homo sapiens ZFR protein protein.
Length = 615
Score = 36.3 bits (80), Expect = 0.071
Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = +2
Query: 323 KKAAQKALVHVCAVCKAQMPDPKTYKQHFE-NKHPKND 433
K+ + +H C VCK P+TYK+H E KH K +
Sbjct: 322 KQPPKPPQIHYCDVCKISCAGPQTYKEHLEGQKHKKKE 359
>AJ314790-1|CAC40818.1| 1057|Homo sapiens putative zinc finger
protein protein.
Length = 1057
Score = 36.3 bits (80), Expect = 0.071
Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = +2
Query: 323 KKAAQKALVHVCAVCKAQMPDPKTYKQHFE-NKHPKND 433
K+ + +H C VCK P+TYK+H E KH K +
Sbjct: 300 KQPPKPPQIHYCDVCKISCAGPQTYKEHLEGQKHKKKE 337
>AB029009-1|BAA83038.1| 902|Homo sapiens KIAA1086 protein protein.
Length = 902
Score = 31.5 bits (68), Expect = 2.0
Identities = 15/44 (34%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
Frame = +2
Query: 308 SATDQKKAAQKAL-VHVCAVCKAQMPDPKTYKQHF-ENKHPKND 433
S + KA + L +H C +CK P+TY++H KH K +
Sbjct: 219 SKLPRPKAGPRQLQLHYCDICKISCAGPQTYREHLGGQKHRKKE 262
>U60179-1|AAC50653.1| 366|Homo sapiens growth hormone secretagogue
receptor type 1a protein.
Length = 366
Score = 30.3 bits (65), Expect = 4.6
Identities = 18/71 (25%), Positives = 35/71 (49%)
Frame = +1
Query: 13 ISAKLFLLLTHWCLFVSRWYLYKHFYKSILLRLEQIRTYCNLVEYKELKFIFFSNIANIS 192
++ +F + W F YL+ ++ L + QI YCNLV + +F+ + A
Sbjct: 265 LAVVVFAFILCWLPFHVGRYLFSKSFEPGSLEIAQISQYCNLVSF----VLFYLSAA--- 317
Query: 193 VAPATYNLVTQ 225
+ P YN++++
Sbjct: 318 INPILYNIMSK 328
>BC113547-1|AAI13548.1| 366|Homo sapiens growth hormone
secretagogue receptor protein.
Length = 366
Score = 30.3 bits (65), Expect = 4.6
Identities = 18/71 (25%), Positives = 35/71 (49%)
Frame = +1
Query: 13 ISAKLFLLLTHWCLFVSRWYLYKHFYKSILLRLEQIRTYCNLVEYKELKFIFFSNIANIS 192
++ +F + W F YL+ ++ L + QI YCNLV + +F+ + A
Sbjct: 265 LAVVVFAFILCWLPFHVGRYLFSKSFEPGSLEIAQISQYCNLVSF----VLFYLSAA--- 317
Query: 193 VAPATYNLVTQ 225
+ P YN++++
Sbjct: 318 INPILYNIMSK 328
>BC035589-1|AAH35589.1| 1832|Homo sapiens zinc finger protein 646
protein.
Length = 1832
Score = 30.3 bits (65), Expect = 4.6
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +2
Query: 311 ATDQKKAAQKALVHVCAVCKAQMPDPKTYKQH 406
ATD AA K H+C++C D ++ ++H
Sbjct: 562 ATDITPAADKTAAHICSICGLLFEDAESLERH 593
>AY429112-1|AAR07907.1| 366|Homo sapiens growth hormone
secretagogue receptor type 1a protein.
Length = 366
Score = 30.3 bits (65), Expect = 4.6
Identities = 18/71 (25%), Positives = 35/71 (49%)
Frame = +1
Query: 13 ISAKLFLLLTHWCLFVSRWYLYKHFYKSILLRLEQIRTYCNLVEYKELKFIFFSNIANIS 192
++ +F + W F YL+ ++ L + QI YCNLV + +F+ + A
Sbjct: 265 LAVVVFAFILCWLPFHVGRYLFSKSFEPGSLEIAQISQYCNLVSF----VLFYLSAA--- 317
Query: 193 VAPATYNLVTQ 225
+ P YN++++
Sbjct: 318 INPILYNIMSK 328
>AF369786-1|AAK71539.1| 366|Homo sapiens growth hormone
secretagogue receptor type 1a protein.
Length = 366
Score = 30.3 bits (65), Expect = 4.6
Identities = 18/71 (25%), Positives = 35/71 (49%)
Frame = +1
Query: 13 ISAKLFLLLTHWCLFVSRWYLYKHFYKSILLRLEQIRTYCNLVEYKELKFIFFSNIANIS 192
++ +F + W F YL+ ++ L + QI YCNLV + +F+ + A
Sbjct: 265 LAVVVFAFILCWLPFHVGRYLFSKSFEPGSLEIAQISQYCNLVSF----VLFYLSAA--- 317
Query: 193 VAPATYNLVTQ 225
+ P YN++++
Sbjct: 318 INPILYNIMSK 328
>AB002294-1|BAA20756.2| 1838|Homo sapiens KIAA0296 protein.
Length = 1838
Score = 30.3 bits (65), Expect = 4.6
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +2
Query: 311 ATDQKKAAQKALVHVCAVCKAQMPDPKTYKQH 406
ATD AA K H+C++C D ++ ++H
Sbjct: 571 ATDITPAADKTAAHICSICGLLFEDAESLERH 602
>AY534241-1|AAT07090.1| 650|Homo sapiens XK-related protein 4
protein.
Length = 650
Score = 29.5 bits (63), Expect = 8.1
Identities = 18/58 (31%), Positives = 24/58 (41%)
Frame = +1
Query: 214 LVTQDGSGAPENSVTGKGC*ENV*DEETTGSQCY*PEEGCTKSISPCVCSLQGSNAGS 387
L D SG+ + G DEE G C GC++ C C+ G +AGS
Sbjct: 22 LQNSDHSGSVQGLAPGLPSGSGAEDEEAAGGGCCPDGGGCSRCC--CCCAGSGGSAGS 77
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 66,217,903
Number of Sequences: 237096
Number of extensions: 1305618
Number of successful extensions: 2866
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 2625
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2862
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5421005376
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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