Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0004_J11
(549 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AE014296-2584|AAF49575.1| 77|Drosophila melanogaster CG15715-P... 117 9e-27
AY071570-1|AAL49192.1| 77|Drosophila melanogaster RE63284p pro... 116 2e-26
AY071229-1|AAL48851.1| 77|Drosophila melanogaster RE26825p pro... 116 2e-26
AE014296-2583|AAF49576.1| 77|Drosophila melanogaster CG18081-P... 116 2e-26
U73125-1|AAB40721.1| 558|Drosophila melanogaster zinc-finger pr... 34 0.11
BT028799-1|ABI34180.1| 634|Drosophila melanogaster LD13728p pro... 34 0.11
BT011357-1|AAR96149.1| 634|Drosophila melanogaster RE70312p pro... 34 0.11
AY122196-1|AAM52708.1| 352|Drosophila melanogaster LD45766p pro... 34 0.11
AY058357-1|AAL13586.1| 635|Drosophila melanogaster GH12756p pro... 34 0.11
AE014297-1108|AAF54502.3| 634|Drosophila melanogaster CG6254-PA... 34 0.11
AE014296-2637|AAF49537.2| 635|Drosophila melanogaster CG5215-PA... 34 0.11
AE014296-2636|AAO41247.1| 884|Drosophila melanogaster CG5215-PB... 34 0.11
AE014298-2406|AAF48611.3| 1901|Drosophila melanogaster CG32575-P... 32 0.59
AE014298-2405|AAF48612.3| 1913|Drosophila melanogaster CG32575-P... 32 0.59
Z11723-2|CAA77786.1| 811|Drosophila melanogaster DNA binding pr... 29 3.1
Z11723-1|CAA77785.1| 813|Drosophila melanogaster DNA binding pr... 29 3.1
X71626-1|CAA50633.1| 813|Drosophila melanogaster tramtrack p88 ... 29 3.1
AE014297-4783|AAN14282.1| 813|Drosophila melanogaster CG1856-PE... 29 3.1
AE014297-4782|AAF57179.1| 813|Drosophila melanogaster CG1856-PB... 29 3.1
AE014297-4781|AAF57180.1| 813|Drosophila melanogaster CG1856-PA... 29 3.1
AE013599-1733|AAF58364.1| 611|Drosophila melanogaster CG13330-P... 28 7.2
>AE014296-2584|AAF49575.1| 77|Drosophila melanogaster CG15715-PA
protein.
Length = 77
Score = 117 bits (282), Expect = 9e-27
Identities = 53/77 (68%), Positives = 58/77 (75%)
Frame = +2
Query: 227 MARGHQKIXXXXXXXXXXXXXXXXXGHSATDQKKAAQKALVHVCAVCKAQMPDPKTYKQH 406
MARGHQKI GHSA DQKKAAQKALV+VCAVCK+QMPDPKTYKQH
Sbjct: 1 MARGHQKIQSQAKASEKQAKLKKQQGHSANDQKKAAQKALVYVCAVCKSQMPDPKTYKQH 60
Query: 407 FENKHPKNDLPEDLKAI 457
FENKHPKND+PE+LK +
Sbjct: 61 FENKHPKNDIPEELKEV 77
>AY071570-1|AAL49192.1| 77|Drosophila melanogaster RE63284p
protein.
Length = 77
Score = 116 bits (279), Expect = 2e-26
Identities = 52/77 (67%), Positives = 58/77 (75%)
Frame = +2
Query: 227 MARGHQKIXXXXXXXXXXXXXXXXXGHSATDQKKAAQKALVHVCAVCKAQMPDPKTYKQH 406
MARGHQKI GHSA DQKKAAQKALV+VCAVCK+QMPDPKTYKQH
Sbjct: 1 MARGHQKIQSQAKASEKQAKLKKQQGHSANDQKKAAQKALVYVCAVCKSQMPDPKTYKQH 60
Query: 407 FENKHPKNDLPEDLKAI 457
FENKHPKND+P++LK +
Sbjct: 61 FENKHPKNDMPDELKEV 77
>AY071229-1|AAL48851.1| 77|Drosophila melanogaster RE26825p
protein.
Length = 77
Score = 116 bits (279), Expect = 2e-26
Identities = 52/77 (67%), Positives = 58/77 (75%)
Frame = +2
Query: 227 MARGHQKIXXXXXXXXXXXXXXXXXGHSATDQKKAAQKALVHVCAVCKAQMPDPKTYKQH 406
MARGHQKI GHSA DQKKAAQKALV+VCAVCK+QMPDP+TYKQH
Sbjct: 1 MARGHQKIRSQAKASEKQAKLKKQQGHSANDQKKAAQKALVYVCAVCKSQMPDPRTYKQH 60
Query: 407 FENKHPKNDLPEDLKAI 457
FENKHPKND+PE+LK +
Sbjct: 61 FENKHPKNDIPEELKEV 77
>AE014296-2583|AAF49576.1| 77|Drosophila melanogaster CG18081-PA
protein.
Length = 77
Score = 116 bits (279), Expect = 2e-26
Identities = 52/77 (67%), Positives = 58/77 (75%)
Frame = +2
Query: 227 MARGHQKIXXXXXXXXXXXXXXXXXGHSATDQKKAAQKALVHVCAVCKAQMPDPKTYKQH 406
MARGHQKI GHSA DQKKAAQKALV+VCAVCK+QMPDPKTYKQH
Sbjct: 1 MARGHQKIQSQAKASEKQAKLKKQQGHSANDQKKAAQKALVYVCAVCKSQMPDPKTYKQH 60
Query: 407 FENKHPKNDLPEDLKAI 457
FENKHPKND+P++LK +
Sbjct: 61 FENKHPKNDMPDELKEV 77
>U73125-1|AAB40721.1| 558|Drosophila melanogaster zinc-finger
protein Zn72D protein.
Length = 558
Score = 34.3 bits (75), Expect = 0.11
Identities = 13/30 (43%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
Frame = +2
Query: 347 VHVCAVCKAQMPDPKTYKQHFE-NKHPKND 433
+H C VCK P+TY++H E KH K +
Sbjct: 127 LHYCEVCKISCAGPQTYREHLEGQKHKKRE 156
>BT028799-1|ABI34180.1| 634|Drosophila melanogaster LD13728p
protein.
Length = 634
Score = 34.3 bits (75), Expect = 0.11
Identities = 14/48 (29%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
Frame = +2
Query: 305 HSATDQKKAAQKALVHVCAVCKAQMPDPKTYKQHFENKH--PKNDLPE 442
H ++ + ++ ++ C +CK PK YK+H E H +DLP+
Sbjct: 314 HVTDEEDEISEVPAMYKCNICKKPYKKPKAYKRHMEEVHNTVADDLPQ 361
>BT011357-1|AAR96149.1| 634|Drosophila melanogaster RE70312p
protein.
Length = 634
Score = 34.3 bits (75), Expect = 0.11
Identities = 14/48 (29%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
Frame = +2
Query: 305 HSATDQKKAAQKALVHVCAVCKAQMPDPKTYKQHFENKH--PKNDLPE 442
H ++ + ++ ++ C +CK PK YK+H E H +DLP+
Sbjct: 314 HVTDEEDEISEVPAMYKCNICKKPYKKPKAYKRHMEEVHNTVADDLPQ 361
>AY122196-1|AAM52708.1| 352|Drosophila melanogaster LD45766p
protein.
Length = 352
Score = 34.3 bits (75), Expect = 0.11
Identities = 14/48 (29%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
Frame = +2
Query: 305 HSATDQKKAAQKALVHVCAVCKAQMPDPKTYKQHFENKH--PKNDLPE 442
H ++ + ++ ++ C +CK PK YK+H E H +DLP+
Sbjct: 32 HVTDEEDEISEVPAMYKCNICKKPYKKPKAYKRHMEEVHNTVADDLPQ 79
>AY058357-1|AAL13586.1| 635|Drosophila melanogaster GH12756p
protein.
Length = 635
Score = 34.3 bits (75), Expect = 0.11
Identities = 13/30 (43%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
Frame = +2
Query: 347 VHVCAVCKAQMPDPKTYKQHFE-NKHPKND 433
+H C VCK P+TY++H E KH K +
Sbjct: 204 LHYCEVCKISCAGPQTYREHLEGQKHKKRE 233
>AE014297-1108|AAF54502.3| 634|Drosophila melanogaster CG6254-PA
protein.
Length = 634
Score = 34.3 bits (75), Expect = 0.11
Identities = 14/48 (29%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
Frame = +2
Query: 305 HSATDQKKAAQKALVHVCAVCKAQMPDPKTYKQHFENKH--PKNDLPE 442
H ++ + ++ ++ C +CK PK YK+H E H +DLP+
Sbjct: 314 HVTDEEDEISEVPAMYKCNICKKPYKKPKAYKRHMEEVHNTVADDLPQ 361
>AE014296-2637|AAF49537.2| 635|Drosophila melanogaster CG5215-PA,
isoform A protein.
Length = 635
Score = 34.3 bits (75), Expect = 0.11
Identities = 13/30 (43%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
Frame = +2
Query: 347 VHVCAVCKAQMPDPKTYKQHFE-NKHPKND 433
+H C VCK P+TY++H E KH K +
Sbjct: 204 LHYCEVCKISCAGPQTYREHLEGQKHKKRE 233
>AE014296-2636|AAO41247.1| 884|Drosophila melanogaster CG5215-PB,
isoform B protein.
Length = 884
Score = 34.3 bits (75), Expect = 0.11
Identities = 13/30 (43%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
Frame = +2
Query: 347 VHVCAVCKAQMPDPKTYKQHFE-NKHPKND 433
+H C VCK P+TY++H E KH K +
Sbjct: 204 LHYCEVCKISCAGPQTYREHLEGQKHKKRE 233
>AE014298-2406|AAF48611.3| 1901|Drosophila melanogaster CG32575-PA,
isoform A protein.
Length = 1901
Score = 31.9 bits (69), Expect = 0.59
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = +2
Query: 353 VCAVCKAQMPDPKTYKQHFENKHPKNDLPEDLKAI 457
VC +C Q + +H E+KHP N LPE K +
Sbjct: 771 VCPICGQQYNNYNNVLRHMESKHP-NKLPETYKCV 804
>AE014298-2405|AAF48612.3| 1913|Drosophila melanogaster CG32575-PB,
isoform B protein.
Length = 1913
Score = 31.9 bits (69), Expect = 0.59
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = +2
Query: 353 VCAVCKAQMPDPKTYKQHFENKHPKNDLPEDLKAI 457
VC +C Q + +H E+KHP N LPE K +
Sbjct: 771 VCPICGQQYNNYNNVLRHMESKHP-NKLPETYKCV 804
>Z11723-2|CAA77786.1| 811|Drosophila melanogaster DNA binding
protein protein.
Length = 811
Score = 29.5 bits (63), Expect = 3.1
Identities = 14/43 (32%), Positives = 19/43 (44%)
Frame = +2
Query: 347 VHVCAVCKAQMPDPKTYKQHFENKHPKNDLPEDLKAI*HLKFL 475
V C VC + P K H + H P+D+ A LK+L
Sbjct: 643 VFPCPVCSKEFSRPDKMKNHLKMTHENFTPPKDIGAFSPLKYL 685
>Z11723-1|CAA77785.1| 813|Drosophila melanogaster DNA binding
protein protein.
Length = 813
Score = 29.5 bits (63), Expect = 3.1
Identities = 14/43 (32%), Positives = 19/43 (44%)
Frame = +2
Query: 347 VHVCAVCKAQMPDPKTYKQHFENKHPKNDLPEDLKAI*HLKFL 475
V C VC + P K H + H P+D+ A LK+L
Sbjct: 645 VFPCPVCSKEFSRPDKMKNHLKMTHENFTPPKDIGAFSPLKYL 687
>X71626-1|CAA50633.1| 813|Drosophila melanogaster tramtrack p88
protein.
Length = 813
Score = 29.5 bits (63), Expect = 3.1
Identities = 14/43 (32%), Positives = 19/43 (44%)
Frame = +2
Query: 347 VHVCAVCKAQMPDPKTYKQHFENKHPKNDLPEDLKAI*HLKFL 475
V C VC + P K H + H P+D+ A LK+L
Sbjct: 645 VFPCPVCSKEFSRPDKMKNHLKMTHENFTPPKDIGAFSPLKYL 687
>AE014297-4783|AAN14282.1| 813|Drosophila melanogaster CG1856-PE,
isoform E protein.
Length = 813
Score = 29.5 bits (63), Expect = 3.1
Identities = 14/43 (32%), Positives = 19/43 (44%)
Frame = +2
Query: 347 VHVCAVCKAQMPDPKTYKQHFENKHPKNDLPEDLKAI*HLKFL 475
V C VC + P K H + H P+D+ A LK+L
Sbjct: 645 VFPCPVCSKEFSRPDKMKNHLKMTHENFTPPKDIGAFSPLKYL 687
>AE014297-4782|AAF57179.1| 813|Drosophila melanogaster CG1856-PB,
isoform B protein.
Length = 813
Score = 29.5 bits (63), Expect = 3.1
Identities = 14/43 (32%), Positives = 19/43 (44%)
Frame = +2
Query: 347 VHVCAVCKAQMPDPKTYKQHFENKHPKNDLPEDLKAI*HLKFL 475
V C VC + P K H + H P+D+ A LK+L
Sbjct: 645 VFPCPVCSKEFSRPDKMKNHLKMTHENFTPPKDIGAFSPLKYL 687
>AE014297-4781|AAF57180.1| 813|Drosophila melanogaster CG1856-PA,
isoform A protein.
Length = 813
Score = 29.5 bits (63), Expect = 3.1
Identities = 14/43 (32%), Positives = 19/43 (44%)
Frame = +2
Query: 347 VHVCAVCKAQMPDPKTYKQHFENKHPKNDLPEDLKAI*HLKFL 475
V C VC + P K H + H P+D+ A LK+L
Sbjct: 645 VFPCPVCSKEFSRPDKMKNHLKMTHENFTPPKDIGAFSPLKYL 687
>AE013599-1733|AAF58364.1| 611|Drosophila melanogaster CG13330-PA
protein.
Length = 611
Score = 28.3 bits (60), Expect = 7.2
Identities = 14/47 (29%), Positives = 23/47 (48%)
Frame = +1
Query: 118 IRTYCNLVEYKELKFIFFSNIANISVAPATYNLVTQDGSGAPENSVT 258
+RT C V Y+ ++ +N ++ +T NL+ G G P S T
Sbjct: 129 LRTCCQSVRYEAMR----RGPSNTTLCQSTTNLIRSAGGGVPSTSTT 171
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,468,120
Number of Sequences: 53049
Number of extensions: 403680
Number of successful extensions: 1277
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1194
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1273
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2089831299
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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