Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0004_J10
(519 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X06617-1|CAA29834.1| 158|Homo sapiens protein ( Human mRNA for ... 244 1e-64
BC100025-1|AAI00026.1| 158|Homo sapiens RPS11 protein protein. 244 1e-64
BC070224-1|AAH70224.1| 158|Homo sapiens ribosomal protein S11 p... 244 1e-64
BC016378-1|AAH16378.1| 158|Homo sapiens ribosomal protein S11 p... 244 1e-64
BC010028-1|AAH10028.1| 158|Homo sapiens ribosomal protein S11 p... 244 1e-64
BC007945-1|AAH07945.1| 158|Homo sapiens RPS11 protein protein. 244 1e-64
BC007603-1|AAH07603.1| 158|Homo sapiens ribosomal protein S11 p... 244 1e-64
BC007283-1|AAH07283.1| 158|Homo sapiens ribosomal protein S11 p... 244 1e-64
AB028893-2|BAA88215.1| 158|Homo sapiens ribosomal protein S11 p... 244 1e-64
AB007152-1|BAA25818.1| 83|Homo sapiens ribosomal protein S11 p... 137 2e-32
U52144-1|AAC50455.1| 419|Homo sapiens isocitrate dehydrogenase ... 42 0.002
Z95636-1|CAB09137.1| 953|Homo sapiens laminin alpha 5 chain pro... 29 9.8
BC003355-1|AAH03355.1| 670|Homo sapiens LAMA5 protein protein. 29 9.8
AL354836-5|CAC22310.1| 3690|Homo sapiens laminin, alpha 5 protein. 29 9.8
AF443072-1|AAM12527.1| 3695|Homo sapiens laminin alpha5 chain pr... 29 9.8
AB011105-1|BAA25459.1| 1645|Homo sapiens KIAA0533 protein protein. 29 9.8
>X06617-1|CAA29834.1| 158|Homo sapiens protein ( Human mRNA for
ribosomal protein S11. ).
Length = 158
Score = 244 bits (597), Expect = 1e-64
Identities = 113/143 (79%), Positives = 129/143 (90%), Gaps = 2/143 (1%)
Frame = +1
Query: 13 MAD-QTERSFQKQPTVFLNRKKGI-GVKRSRKPLRYHKDVGLGFKTPREAVEGTYIDKKC 186
MAD QTER++QKQPT+F N+K+ + G K RY+K++GLGFKTP+EA+EGTYIDKKC
Sbjct: 1 MADIQTERAYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKC 60
Query: 187 PFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDV 366
PFTGNVSIRGRIL+GVV KMKMQRTIVIRRDYLHY+ KYNRFEKRH+NMSVHLSPCFRDV
Sbjct: 61 PFTGNVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPCFRDV 120
Query: 367 EIGDIVTIGECRPLSKTARFNVL 435
+IGDIVT+GECRPLSKT RFNVL
Sbjct: 121 QIGDIVTVGECRPLSKTVRFNVL 143
>BC100025-1|AAI00026.1| 158|Homo sapiens RPS11 protein protein.
Length = 158
Score = 244 bits (597), Expect = 1e-64
Identities = 113/143 (79%), Positives = 129/143 (90%), Gaps = 2/143 (1%)
Frame = +1
Query: 13 MAD-QTERSFQKQPTVFLNRKKGI-GVKRSRKPLRYHKDVGLGFKTPREAVEGTYIDKKC 186
MAD QTER++QKQPT+F N+K+ + G K RY+K++GLGFKTP+EA+EGTYIDKKC
Sbjct: 1 MADIQTERAYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKC 60
Query: 187 PFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDV 366
PFTGNVSIRGRIL+GVV KMKMQRTIVIRRDYLHY+ KYNRFEKRH+NMSVHLSPCFRDV
Sbjct: 61 PFTGNVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPCFRDV 120
Query: 367 EIGDIVTIGECRPLSKTARFNVL 435
+IGDIVT+GECRPLSKT RFNVL
Sbjct: 121 QIGDIVTVGECRPLSKTVRFNVL 143
>BC070224-1|AAH70224.1| 158|Homo sapiens ribosomal protein S11
protein.
Length = 158
Score = 244 bits (597), Expect = 1e-64
Identities = 113/143 (79%), Positives = 129/143 (90%), Gaps = 2/143 (1%)
Frame = +1
Query: 13 MAD-QTERSFQKQPTVFLNRKKGI-GVKRSRKPLRYHKDVGLGFKTPREAVEGTYIDKKC 186
MAD QTER++QKQPT+F N+K+ + G K RY+K++GLGFKTP+EA+EGTYIDKKC
Sbjct: 1 MADIQTERAYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKC 60
Query: 187 PFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDV 366
PFTGNVSIRGRIL+GVV KMKMQRTIVIRRDYLHY+ KYNRFEKRH+NMSVHLSPCFRDV
Sbjct: 61 PFTGNVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPCFRDV 120
Query: 367 EIGDIVTIGECRPLSKTARFNVL 435
+IGDIVT+GECRPLSKT RFNVL
Sbjct: 121 QIGDIVTVGECRPLSKTVRFNVL 143
>BC016378-1|AAH16378.1| 158|Homo sapiens ribosomal protein S11
protein.
Length = 158
Score = 244 bits (597), Expect = 1e-64
Identities = 113/143 (79%), Positives = 129/143 (90%), Gaps = 2/143 (1%)
Frame = +1
Query: 13 MAD-QTERSFQKQPTVFLNRKKGI-GVKRSRKPLRYHKDVGLGFKTPREAVEGTYIDKKC 186
MAD QTER++QKQPT+F N+K+ + G K RY+K++GLGFKTP+EA+EGTYIDKKC
Sbjct: 1 MADIQTERAYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKC 60
Query: 187 PFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDV 366
PFTGNVSIRGRIL+GVV KMKMQRTIVIRRDYLHY+ KYNRFEKRH+NMSVHLSPCFRDV
Sbjct: 61 PFTGNVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPCFRDV 120
Query: 367 EIGDIVTIGECRPLSKTARFNVL 435
+IGDIVT+GECRPLSKT RFNVL
Sbjct: 121 QIGDIVTVGECRPLSKTVRFNVL 143
>BC010028-1|AAH10028.1| 158|Homo sapiens ribosomal protein S11
protein.
Length = 158
Score = 244 bits (597), Expect = 1e-64
Identities = 113/143 (79%), Positives = 129/143 (90%), Gaps = 2/143 (1%)
Frame = +1
Query: 13 MAD-QTERSFQKQPTVFLNRKKGI-GVKRSRKPLRYHKDVGLGFKTPREAVEGTYIDKKC 186
MAD QTER++QKQPT+F N+K+ + G K RY+K++GLGFKTP+EA+EGTYIDKKC
Sbjct: 1 MADIQTERAYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKC 60
Query: 187 PFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDV 366
PFTGNVSIRGRIL+GVV KMKMQRTIVIRRDYLHY+ KYNRFEKRH+NMSVHLSPCFRDV
Sbjct: 61 PFTGNVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPCFRDV 120
Query: 367 EIGDIVTIGECRPLSKTARFNVL 435
+IGDIVT+GECRPLSKT RFNVL
Sbjct: 121 QIGDIVTVGECRPLSKTVRFNVL 143
>BC007945-1|AAH07945.1| 158|Homo sapiens RPS11 protein protein.
Length = 158
Score = 244 bits (597), Expect = 1e-64
Identities = 113/143 (79%), Positives = 129/143 (90%), Gaps = 2/143 (1%)
Frame = +1
Query: 13 MAD-QTERSFQKQPTVFLNRKKGI-GVKRSRKPLRYHKDVGLGFKTPREAVEGTYIDKKC 186
MAD QTER++QKQPT+F N+K+ + G K RY+K++GLGFKTP+EA+EGTYIDKKC
Sbjct: 1 MADIQTERAYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKC 60
Query: 187 PFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDV 366
PFTGNVSIRGRIL+GVV KMKMQRTIVIRRDYLHY+ KYNRFEKRH+NMSVHLSPCFRDV
Sbjct: 61 PFTGNVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPCFRDV 120
Query: 367 EIGDIVTIGECRPLSKTARFNVL 435
+IGDIVT+GECRPLSKT RFNVL
Sbjct: 121 QIGDIVTVGECRPLSKTVRFNVL 143
>BC007603-1|AAH07603.1| 158|Homo sapiens ribosomal protein S11
protein.
Length = 158
Score = 244 bits (597), Expect = 1e-64
Identities = 113/143 (79%), Positives = 129/143 (90%), Gaps = 2/143 (1%)
Frame = +1
Query: 13 MAD-QTERSFQKQPTVFLNRKKGI-GVKRSRKPLRYHKDVGLGFKTPREAVEGTYIDKKC 186
MAD QTER++QKQPT+F N+K+ + G K RY+K++GLGFKTP+EA+EGTYIDKKC
Sbjct: 1 MADIQTERAYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKC 60
Query: 187 PFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDV 366
PFTGNVSIRGRIL+GVV KMKMQRTIVIRRDYLHY+ KYNRFEKRH+NMSVHLSPCFRDV
Sbjct: 61 PFTGNVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPCFRDV 120
Query: 367 EIGDIVTIGECRPLSKTARFNVL 435
+IGDIVT+GECRPLSKT RFNVL
Sbjct: 121 QIGDIVTVGECRPLSKTVRFNVL 143
>BC007283-1|AAH07283.1| 158|Homo sapiens ribosomal protein S11
protein.
Length = 158
Score = 244 bits (597), Expect = 1e-64
Identities = 113/143 (79%), Positives = 129/143 (90%), Gaps = 2/143 (1%)
Frame = +1
Query: 13 MAD-QTERSFQKQPTVFLNRKKGI-GVKRSRKPLRYHKDVGLGFKTPREAVEGTYIDKKC 186
MAD QTER++QKQPT+F N+K+ + G K RY+K++GLGFKTP+EA+EGTYIDKKC
Sbjct: 1 MADIQTERAYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKC 60
Query: 187 PFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDV 366
PFTGNVSIRGRIL+GVV KMKMQRTIVIRRDYLHY+ KYNRFEKRH+NMSVHLSPCFRDV
Sbjct: 61 PFTGNVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPCFRDV 120
Query: 367 EIGDIVTIGECRPLSKTARFNVL 435
+IGDIVT+GECRPLSKT RFNVL
Sbjct: 121 QIGDIVTVGECRPLSKTVRFNVL 143
>AB028893-2|BAA88215.1| 158|Homo sapiens ribosomal protein S11
protein.
Length = 158
Score = 244 bits (597), Expect = 1e-64
Identities = 113/143 (79%), Positives = 129/143 (90%), Gaps = 2/143 (1%)
Frame = +1
Query: 13 MAD-QTERSFQKQPTVFLNRKKGI-GVKRSRKPLRYHKDVGLGFKTPREAVEGTYIDKKC 186
MAD QTER++QKQPT+F N+K+ + G K RY+K++GLGFKTP+EA+EGTYIDKKC
Sbjct: 1 MADIQTERAYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKC 60
Query: 187 PFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDV 366
PFTGNVSIRGRIL+GVV KMKMQRTIVIRRDYLHY+ KYNRFEKRH+NMSVHLSPCFRDV
Sbjct: 61 PFTGNVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPCFRDV 120
Query: 367 EIGDIVTIGECRPLSKTARFNVL 435
+IGDIVT+GECRPLSKT RFNVL
Sbjct: 121 QIGDIVTVGECRPLSKTVRFNVL 143
>AB007152-1|BAA25818.1| 83|Homo sapiens ribosomal protein S11
protein.
Length = 83
Score = 137 bits (331), Expect = 2e-32
Identities = 61/68 (89%), Positives = 65/68 (95%)
Frame = +1
Query: 232 VVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLS 411
VV KMKMQRTIVIRRDYLHY+ KYNRFEKRH+NMSVHLSPCFRDV+IGDIVT+GECRPLS
Sbjct: 1 VVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPCFRDVQIGDIVTVGECRPLS 60
Query: 412 KTARFNVL 435
KT RFNVL
Sbjct: 61 KTVRFNVL 68
>U52144-1|AAC50455.1| 419|Homo sapiens isocitrate dehydrogenase
protein.
Length = 419
Score = 41.5 bits (93), Expect = 0.002
Identities = 16/27 (59%), Positives = 22/27 (81%)
Frame = -1
Query: 441 DLQYIEPGCLGKRPALANCDDVSDFHV 361
DL+++E CL +RPALA+CDDV+D V
Sbjct: 18 DLEHVEAHCLAQRPALAHCDDVTDLDV 44
>Z95636-1|CAB09137.1| 953|Homo sapiens laminin alpha 5 chain
protein.
Length = 953
Score = 29.1 bits (62), Expect = 9.8
Identities = 15/37 (40%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = -2
Query: 152 SRGVLKPRPTS-LWYLRGLRLRFTPMPFLRFKKTVGC 45
+ G+L RP ++Y+ G FTP P LRF GC
Sbjct: 121 AEGLLNLRPDDFVFYVGGYPSTFTPPPLLRFPGYRGC 157
>BC003355-1|AAH03355.1| 670|Homo sapiens LAMA5 protein protein.
Length = 670
Score = 29.1 bits (62), Expect = 9.8
Identities = 15/37 (40%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = -2
Query: 152 SRGVLKPRPTS-LWYLRGLRLRFTPMPFLRFKKTVGC 45
+ G+L RP ++Y+ G FTP P LRF GC
Sbjct: 69 AEGLLNLRPDDFVFYVGGYPSTFTPPPLLRFPGYRGC 105
>AL354836-5|CAC22310.1| 3690|Homo sapiens laminin, alpha 5 protein.
Length = 3690
Score = 29.1 bits (62), Expect = 9.8
Identities = 15/37 (40%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = -2
Query: 152 SRGVLKPRPTS-LWYLRGLRLRFTPMPFLRFKKTVGC 45
+ G+L RP ++Y+ G FTP P LRF GC
Sbjct: 2863 AEGLLNLRPDDFVFYVGGYPSTFTPPPLLRFPGYRGC 2899
>AF443072-1|AAM12527.1| 3695|Homo sapiens laminin alpha5 chain
precursor protein.
Length = 3695
Score = 29.1 bits (62), Expect = 9.8
Identities = 15/37 (40%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = -2
Query: 152 SRGVLKPRPTS-LWYLRGLRLRFTPMPFLRFKKTVGC 45
+ G+L RP ++Y+ G FTP P LRF GC
Sbjct: 2863 AEGLLNLRPDDFVFYVGGYPSTFTPPPLLRFPGYRGC 2899
>AB011105-1|BAA25459.1| 1645|Homo sapiens KIAA0533 protein protein.
Length = 1645
Score = 29.1 bits (62), Expect = 9.8
Identities = 15/37 (40%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = -2
Query: 152 SRGVLKPRPTS-LWYLRGLRLRFTPMPFLRFKKTVGC 45
+ G+L RP ++Y+ G FTP P LRF GC
Sbjct: 813 AEGLLNLRPDDFVFYVGGYPSTFTPPPLLRFPGYRGC 849
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 74,271,590
Number of Sequences: 237096
Number of extensions: 1587547
Number of successful extensions: 6817
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 6768
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6808
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4933413474
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -