Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0004_J09
(549 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY190519-1|AAO38848.1| 1692|Homo sapiens Rab3A-interacting molec... 35 0.16
AL445256-7|CAI39602.1| 624|Homo sapiens regulating synaptic mem... 31 2.0
AL035633-7|CAI42137.1| 624|Homo sapiens regulating synaptic mem... 31 2.0
AF263308-1|AAG23165.1| 596|Homo sapiens rab3 interacting protei... 31 2.0
AK092426-1|BAC03887.1| 258|Homo sapiens protein ( Homo sapiens ... 31 3.5
M74558-1|AAA60550.1| 1287|Homo sapiens SIL protein. 30 4.6
BC126223-1|AAI26224.1| 1287|Homo sapiens STIL protein protein. 30 4.6
BC117319-1|AAI17320.1| 257|Homo sapiens TPRXL protein protein. 30 4.6
BC053615-1|AAH53615.1| 919|Homo sapiens STIL protein protein. 30 4.6
AL513322-7|CAI13468.1| 1287|Homo sapiens TAL1 (SCL) interrupting... 30 4.6
AL513322-5|CAI13466.1| 918|Homo sapiens TAL1 (SCL) interrupting... 30 4.6
AL513322-2|CAI13463.1| 592|Homo sapiens TAL1 (SCL) interrupting... 30 4.6
AL135960-4|CAI19733.1| 1287|Homo sapiens TAL1 (SCL) interrupting... 30 4.6
AL135960-3|CAI19732.1| 918|Homo sapiens TAL1 (SCL) interrupting... 30 4.6
AL135960-2|CAI19731.1| 592|Homo sapiens TAL1 (SCL) interrupting... 30 4.6
AF349657-1|AAK51418.1| 1287|Homo sapiens SIL protein protein. 30 4.6
Z83844-7|CAI20371.1| 2193|Homo sapiens protein ( S domain contai... 30 6.1
DQ278603-1|ABB77204.1| 2266|Homo sapiens trio-associated repeat ... 30 6.1
DQ228005-1|ABB59561.1| 2365|Homo sapiens TRIOBP isoform 6 protein. 30 6.1
DQ228004-1|ABB59560.1| 1144|Homo sapiens TRIOBP isoform 4 protein. 30 6.1
DQ228003-1|ABB59559.1| 2193|Homo sapiens TRIOBP isoform 3 protein. 30 6.1
EF015897-1|ABM64208.1| 846|Homo sapiens CLOCK protein. 29 8.1
BC126159-1|AAI26160.1| 846|Homo sapiens clock homolog (mouse) p... 29 8.1
BC126157-1|AAI26158.1| 846|Homo sapiens clock homolog (mouse) p... 29 8.1
BC041878-1|AAH41878.1| 846|Homo sapiens CLOCK protein protein. 29 8.1
AL133561-1|CAB63715.1| 580|Homo sapiens hypothetical protein pr... 29 8.1
AK223549-1|BAD97269.1| 846|Homo sapiens clock variant protein. 29 8.1
AF172271-1|AAF03789.1| 1268|Homo sapiens Traf2 and NCK interacti... 29 8.1
AF172270-1|AAF03788.1| 1297|Homo sapiens Traf2 and NCK interacti... 29 8.1
AF172269-1|AAF03787.1| 1323|Homo sapiens Traf2 and NCK interacti... 29 8.1
AF172267-1|AAF03785.1| 1352|Homo sapiens Traf2 and NCK interacti... 29 8.1
AF011568-1|AAB83969.1| 846|Homo sapiens CLOCK protein. 29 8.1
AB002332-1|BAA20792.2| 848|Homo sapiens KIAA0334 protein. 29 8.1
>AY190519-1|AAO38848.1| 1692|Homo sapiens Rab3A-interacting molecule
protein.
Length = 1692
Score = 35.1 bits (77), Expect = 0.16
Identities = 23/85 (27%), Positives = 36/85 (42%)
Frame = +1
Query: 43 NSETEAVVKHSASSPQEVIKQQCTAFKDPRLEP**SALRPDRESASPSTRTALRPDRDSA 222
+++T++V + S E F D L S L+P + A ++ LRPD
Sbjct: 1071 HTKTKSVTRQDISLHHECFNSTVLRFTDEILV---SELQPFLDRARSASTNCLRPDTSLH 1127
Query: 223 SPSHSDPRSEPTRSANRTSEPRIEL 297
SP R P+ R PRI++
Sbjct: 1128 SPERERGRWSPSLDRRRPPSPRIQI 1152
>AL445256-7|CAI39602.1| 624|Homo sapiens regulating synaptic
membrane exocytosis 1 protein.
Length = 624
Score = 31.5 bits (68), Expect = 2.0
Identities = 16/50 (32%), Positives = 23/50 (46%)
Frame = +1
Query: 148 SALRPDRESASPSTRTALRPDRDSASPSHSDPRSEPTRSANRTSEPRIEL 297
S L+P + A ++ LRPD SP R P+ R PRI++
Sbjct: 292 SELQPFLDRARSASTNCLRPDTSLHSPERERGRWSPSLDRRRPPSPRIQI 341
>AL035633-7|CAI42137.1| 624|Homo sapiens regulating synaptic
membrane exocytosis 1 protein.
Length = 624
Score = 31.5 bits (68), Expect = 2.0
Identities = 16/50 (32%), Positives = 23/50 (46%)
Frame = +1
Query: 148 SALRPDRESASPSTRTALRPDRDSASPSHSDPRSEPTRSANRTSEPRIEL 297
S L+P + A ++ LRPD SP R P+ R PRI++
Sbjct: 292 SELQPFLDRARSASTNCLRPDTSLHSPERERGRWSPSLDRRRPPSPRIQI 341
>AF263308-1|AAG23165.1| 596|Homo sapiens rab3 interacting protein
variant 4 protein.
Length = 596
Score = 31.5 bits (68), Expect = 2.0
Identities = 16/50 (32%), Positives = 23/50 (46%)
Frame = +1
Query: 148 SALRPDRESASPSTRTALRPDRDSASPSHSDPRSEPTRSANRTSEPRIEL 297
S L+P + A ++ LRPD SP R P+ R PRI++
Sbjct: 264 SELQPFLDRARSASTNCLRPDTSLHSPERERGRWSPSLDRRRPPSPRIQI 313
>AK092426-1|BAC03887.1| 258|Homo sapiens protein ( Homo sapiens
cDNA FLJ35107 fis, clone PLACE6006871, moderately
similar to SUPPRESSOR PROTEIN SRP40. ).
Length = 258
Score = 30.7 bits (66), Expect = 3.5
Identities = 22/84 (26%), Positives = 37/84 (44%), Gaps = 3/84 (3%)
Frame = +1
Query: 43 NSETEAVVKHSASSPQEVIKQQCTAFKDPRLEP**SALRPDRESASP---STRTALRPDR 213
+S + + S+SSP ++ P S+ P S+SP S+ ++ P
Sbjct: 90 SSPSSSSSSSSSSSPSSSNSSSSSSSSSPSSSSSSSSSSPSSSSSSPSSSSSSSSSSPSS 149
Query: 214 DSASPSHSDPRSEPTRSANRTSEP 285
S+SPS S S + S+ +S P
Sbjct: 150 SSSSPSSSSSSSSSSSSSPSSSSP 173
>M74558-1|AAA60550.1| 1287|Homo sapiens SIL protein.
Length = 1287
Score = 30.3 bits (65), Expect = 4.6
Identities = 21/64 (32%), Positives = 28/64 (43%)
Frame = +1
Query: 49 ETEAVVKHSASSPQEVIKQQCTAFKDPRLEP**SALRPDRESASPSTRTALRPDRDSASP 228
++EA+ KHS P C AF P ALRP + S S + + P + P
Sbjct: 633 QSEALQKHSLFHPSGCPALYCNAFCSSS-SP--IALRPQGDMGSCSPHSNIEPSPVARPP 689
Query: 229 SHSD 240
SH D
Sbjct: 690 SHMD 693
>BC126223-1|AAI26224.1| 1287|Homo sapiens STIL protein protein.
Length = 1287
Score = 30.3 bits (65), Expect = 4.6
Identities = 21/64 (32%), Positives = 28/64 (43%)
Frame = +1
Query: 49 ETEAVVKHSASSPQEVIKQQCTAFKDPRLEP**SALRPDRESASPSTRTALRPDRDSASP 228
++EA+ KHS P C AF P ALRP + S S + + P + P
Sbjct: 633 QSEALQKHSLFHPSGCPALYCNAFCSSS-SP--IALRPQGDMGSCSPHSNIEPSPVARPP 689
Query: 229 SHSD 240
SH D
Sbjct: 690 SHMD 693
>BC117319-1|AAI17320.1| 257|Homo sapiens TPRXL protein protein.
Length = 257
Score = 30.3 bits (65), Expect = 4.6
Identities = 21/74 (28%), Positives = 33/74 (44%), Gaps = 3/74 (4%)
Frame = +1
Query: 73 SASSPQEVIKQQCTAFKDPRLEP**SALRPDRESASP---STRTALRPDRDSASPSHSDP 243
S+SSP ++ P S+ P S+SP S+ ++ P S+SPS S
Sbjct: 99 SSSSPSSSNSSSSSSSSSPSSSSSSSSSSPSSSSSSPSSSSSSSSSSPSSSSSSPSSSSS 158
Query: 244 RSEPTRSANRTSEP 285
S + S+ +S P
Sbjct: 159 SSSSSSSSPSSSSP 172
>BC053615-1|AAH53615.1| 919|Homo sapiens STIL protein protein.
Length = 919
Score = 30.3 bits (65), Expect = 4.6
Identities = 21/64 (32%), Positives = 28/64 (43%)
Frame = +1
Query: 49 ETEAVVKHSASSPQEVIKQQCTAFKDPRLEP**SALRPDRESASPSTRTALRPDRDSASP 228
++EA+ KHS P C AF P ALRP + S S + + P + P
Sbjct: 586 QSEALQKHSLFHPSGCPALYCNAFCSSS-SP--IALRPQGDMGSCSPHSNIEPSPVARPP 642
Query: 229 SHSD 240
SH D
Sbjct: 643 SHMD 646
>AL513322-7|CAI13468.1| 1287|Homo sapiens TAL1 (SCL) interrupting
locus protein.
Length = 1287
Score = 30.3 bits (65), Expect = 4.6
Identities = 21/64 (32%), Positives = 28/64 (43%)
Frame = +1
Query: 49 ETEAVVKHSASSPQEVIKQQCTAFKDPRLEP**SALRPDRESASPSTRTALRPDRDSASP 228
++EA+ KHS P C AF P ALRP + S S + + P + P
Sbjct: 633 QSEALQKHSLFHPSGCPALYCNAFCSSS-SP--IALRPQGDMGSCSPHSNIEPSPVARPP 689
Query: 229 SHSD 240
SH D
Sbjct: 690 SHMD 693
>AL513322-5|CAI13466.1| 918|Homo sapiens TAL1 (SCL) interrupting
locus protein.
Length = 918
Score = 30.3 bits (65), Expect = 4.6
Identities = 21/64 (32%), Positives = 28/64 (43%)
Frame = +1
Query: 49 ETEAVVKHSASSPQEVIKQQCTAFKDPRLEP**SALRPDRESASPSTRTALRPDRDSASP 228
++EA+ KHS P C AF P ALRP + S S + + P + P
Sbjct: 586 QSEALQKHSLFHPSGCPALYCNAFCSSS-SP--IALRPQGDMGSCSPHSNIEPSPVARPP 642
Query: 229 SHSD 240
SH D
Sbjct: 643 SHMD 646
>AL513322-2|CAI13463.1| 592|Homo sapiens TAL1 (SCL) interrupting
locus protein.
Length = 592
Score = 30.3 bits (65), Expect = 4.6
Identities = 21/64 (32%), Positives = 28/64 (43%)
Frame = +1
Query: 49 ETEAVVKHSASSPQEVIKQQCTAFKDPRLEP**SALRPDRESASPSTRTALRPDRDSASP 228
++EA+ KHS P C AF P ALRP + S S + + P + P
Sbjct: 246 QSEALQKHSLFHPSGCPALYCNAFCSSS-SP--IALRPQGDMGSCSPHSNIEPSPVARPP 302
Query: 229 SHSD 240
SH D
Sbjct: 303 SHMD 306
>AL135960-4|CAI19733.1| 1287|Homo sapiens TAL1 (SCL) interrupting
locus protein.
Length = 1287
Score = 30.3 bits (65), Expect = 4.6
Identities = 21/64 (32%), Positives = 28/64 (43%)
Frame = +1
Query: 49 ETEAVVKHSASSPQEVIKQQCTAFKDPRLEP**SALRPDRESASPSTRTALRPDRDSASP 228
++EA+ KHS P C AF P ALRP + S S + + P + P
Sbjct: 633 QSEALQKHSLFHPSGCPALYCNAFCSSS-SP--IALRPQGDMGSCSPHSNIEPSPVARPP 689
Query: 229 SHSD 240
SH D
Sbjct: 690 SHMD 693
>AL135960-3|CAI19732.1| 918|Homo sapiens TAL1 (SCL) interrupting
locus protein.
Length = 918
Score = 30.3 bits (65), Expect = 4.6
Identities = 21/64 (32%), Positives = 28/64 (43%)
Frame = +1
Query: 49 ETEAVVKHSASSPQEVIKQQCTAFKDPRLEP**SALRPDRESASPSTRTALRPDRDSASP 228
++EA+ KHS P C AF P ALRP + S S + + P + P
Sbjct: 586 QSEALQKHSLFHPSGCPALYCNAFCSSS-SP--IALRPQGDMGSCSPHSNIEPSPVARPP 642
Query: 229 SHSD 240
SH D
Sbjct: 643 SHMD 646
>AL135960-2|CAI19731.1| 592|Homo sapiens TAL1 (SCL) interrupting
locus protein.
Length = 592
Score = 30.3 bits (65), Expect = 4.6
Identities = 21/64 (32%), Positives = 28/64 (43%)
Frame = +1
Query: 49 ETEAVVKHSASSPQEVIKQQCTAFKDPRLEP**SALRPDRESASPSTRTALRPDRDSASP 228
++EA+ KHS P C AF P ALRP + S S + + P + P
Sbjct: 246 QSEALQKHSLFHPSGCPALYCNAFCSSS-SP--IALRPQGDMGSCSPHSNIEPSPVARPP 302
Query: 229 SHSD 240
SH D
Sbjct: 303 SHMD 306
>AF349657-1|AAK51418.1| 1287|Homo sapiens SIL protein protein.
Length = 1287
Score = 30.3 bits (65), Expect = 4.6
Identities = 21/64 (32%), Positives = 28/64 (43%)
Frame = +1
Query: 49 ETEAVVKHSASSPQEVIKQQCTAFKDPRLEP**SALRPDRESASPSTRTALRPDRDSASP 228
++EA+ KHS P C AF P ALRP + S S + + P + P
Sbjct: 633 QSEALQKHSLFHPSGCPALYCNAFCSSS-SP--IALRPQGDMGSCSPHSNIEPSPVARPP 689
Query: 229 SHSD 240
SH D
Sbjct: 690 SHMD 693
>Z83844-7|CAI20371.1| 2193|Homo sapiens protein ( S domain
containing protein ).).
Length = 2193
Score = 29.9 bits (64), Expect = 6.1
Identities = 24/78 (30%), Positives = 34/78 (43%), Gaps = 7/78 (8%)
Frame = +1
Query: 76 ASSPQEVIKQQ-----CTAFKDPRLEP**SALRPDR--ESASPSTRTALRPDRDSASPSH 234
ASSP I+Q+ C +PR A P R + +P T A R D ++SP+
Sbjct: 488 ASSPNRTIQQENPRTSCALRDNPR------ASSPSRTIQQENPRTSCAQRDDPRASSPNR 541
Query: 235 SDPRSEPTRSANRTSEPR 288
+ + P S R PR
Sbjct: 542 TTQQENPRTSCARRDNPR 559
Score = 29.5 bits (63), Expect = 8.1
Identities = 24/78 (30%), Positives = 35/78 (44%), Gaps = 7/78 (8%)
Frame = +1
Query: 76 ASSPQEVIKQQ-----CTAFKDPRLEP**SALRPDR--ESASPSTRTALRPDRDSASPSH 234
ASSP +Q C DPR A P+R + +P T ALR + ++SPS
Sbjct: 464 ASSPNRTTQQDSPRTSCARRDDPR------ASSPNRTIQQENPRTSCALRDNPRASSPSR 517
Query: 235 SDPRSEPTRSANRTSEPR 288
+ + P S + +PR
Sbjct: 518 TIQQENPRTSCAQRDDPR 535
>DQ278603-1|ABB77204.1| 2266|Homo sapiens trio-associated repeat on
actin protein.
Length = 2266
Score = 29.9 bits (64), Expect = 6.1
Identities = 24/78 (30%), Positives = 34/78 (43%), Gaps = 7/78 (8%)
Frame = +1
Query: 76 ASSPQEVIKQQ-----CTAFKDPRLEP**SALRPDR--ESASPSTRTALRPDRDSASPSH 234
ASSP I+Q+ C +PR A P R + +P T A R D ++SP+
Sbjct: 660 ASSPNRTIQQENPRTSCALRDNPR------ASSPSRTIQQENPRTSCAQRDDPRASSPNR 713
Query: 235 SDPRSEPTRSANRTSEPR 288
+ + P S R PR
Sbjct: 714 TTQQENPRTSCARRDNPR 731
Score = 29.5 bits (63), Expect = 8.1
Identities = 24/78 (30%), Positives = 35/78 (44%), Gaps = 7/78 (8%)
Frame = +1
Query: 76 ASSPQEVIKQQ-----CTAFKDPRLEP**SALRPDR--ESASPSTRTALRPDRDSASPSH 234
ASSP +Q C DPR A P+R + +P T ALR + ++SPS
Sbjct: 636 ASSPNRTTQQDSPRTSCARRDDPR------ASSPNRTIQQENPRTSCALRDNPRASSPSR 689
Query: 235 SDPRSEPTRSANRTSEPR 288
+ + P S + +PR
Sbjct: 690 TIQQENPRTSCAQRDDPR 707
>DQ228005-1|ABB59561.1| 2365|Homo sapiens TRIOBP isoform 6 protein.
Length = 2365
Score = 29.9 bits (64), Expect = 6.1
Identities = 24/78 (30%), Positives = 34/78 (43%), Gaps = 7/78 (8%)
Frame = +1
Query: 76 ASSPQEVIKQQ-----CTAFKDPRLEP**SALRPDR--ESASPSTRTALRPDRDSASPSH 234
ASSP I+Q+ C +PR A P R + +P T A R D ++SP+
Sbjct: 660 ASSPNRTIQQENPRTSCALRDNPR------ASSPSRTIQQENPRTSCAQRDDPRASSPNR 713
Query: 235 SDPRSEPTRSANRTSEPR 288
+ + P S R PR
Sbjct: 714 TTQQENPRTSCARRDNPR 731
Score = 29.5 bits (63), Expect = 8.1
Identities = 24/78 (30%), Positives = 35/78 (44%), Gaps = 7/78 (8%)
Frame = +1
Query: 76 ASSPQEVIKQQ-----CTAFKDPRLEP**SALRPDR--ESASPSTRTALRPDRDSASPSH 234
ASSP +Q C DPR A P+R + +P T ALR + ++SPS
Sbjct: 636 ASSPNRTTQQDSPRTSCARRDDPR------ASSPNRTIQQENPRTSCALRDNPRASSPSR 689
Query: 235 SDPRSEPTRSANRTSEPR 288
+ + P S + +PR
Sbjct: 690 TIQQENPRTSCAQRDDPR 707
>DQ228004-1|ABB59560.1| 1144|Homo sapiens TRIOBP isoform 4 protein.
Length = 1144
Score = 29.9 bits (64), Expect = 6.1
Identities = 24/78 (30%), Positives = 34/78 (43%), Gaps = 7/78 (8%)
Frame = +1
Query: 76 ASSPQEVIKQQ-----CTAFKDPRLEP**SALRPDR--ESASPSTRTALRPDRDSASPSH 234
ASSP I+Q+ C +PR A P R + +P T A R D ++SP+
Sbjct: 488 ASSPNRTIQQENPRTSCALRDNPR------ASSPSRTIQQENPRTSCAQRDDPRASSPNR 541
Query: 235 SDPRSEPTRSANRTSEPR 288
+ + P S R PR
Sbjct: 542 TTQQENPRTSCARRDNPR 559
Score = 29.5 bits (63), Expect = 8.1
Identities = 24/78 (30%), Positives = 35/78 (44%), Gaps = 7/78 (8%)
Frame = +1
Query: 76 ASSPQEVIKQQ-----CTAFKDPRLEP**SALRPDR--ESASPSTRTALRPDRDSASPSH 234
ASSP +Q C DPR A P+R + +P T ALR + ++SPS
Sbjct: 464 ASSPNRTTQQDSPRTSCARRDDPR------ASSPNRTIQQENPRTSCALRDNPRASSPSR 517
Query: 235 SDPRSEPTRSANRTSEPR 288
+ + P S + +PR
Sbjct: 518 TIQQENPRTSCAQRDDPR 535
>DQ228003-1|ABB59559.1| 2193|Homo sapiens TRIOBP isoform 3 protein.
Length = 2193
Score = 29.9 bits (64), Expect = 6.1
Identities = 24/78 (30%), Positives = 34/78 (43%), Gaps = 7/78 (8%)
Frame = +1
Query: 76 ASSPQEVIKQQ-----CTAFKDPRLEP**SALRPDR--ESASPSTRTALRPDRDSASPSH 234
ASSP I+Q+ C +PR A P R + +P T A R D ++SP+
Sbjct: 488 ASSPNRTIQQENPRTSCALRDNPR------ASSPSRTIQQENPRTSCAQRDDPRASSPNR 541
Query: 235 SDPRSEPTRSANRTSEPR 288
+ + P S R PR
Sbjct: 542 TTQQENPRTSCARRDNPR 559
Score = 29.5 bits (63), Expect = 8.1
Identities = 24/78 (30%), Positives = 35/78 (44%), Gaps = 7/78 (8%)
Frame = +1
Query: 76 ASSPQEVIKQQ-----CTAFKDPRLEP**SALRPDR--ESASPSTRTALRPDRDSASPSH 234
ASSP +Q C DPR A P+R + +P T ALR + ++SPS
Sbjct: 464 ASSPNRTTQQDSPRTSCARRDDPR------ASSPNRTIQQENPRTSCALRDNPRASSPSR 517
Query: 235 SDPRSEPTRSANRTSEPR 288
+ + P S + +PR
Sbjct: 518 TIQQENPRTSCAQRDDPR 535
>EF015897-1|ABM64208.1| 846|Homo sapiens CLOCK protein.
Length = 846
Score = 29.5 bits (63), Expect = 8.1
Identities = 15/41 (36%), Positives = 21/41 (51%)
Frame = +1
Query: 163 DRESASPSTRTALRPDRDSASPSHSDPRSEPTRSANRTSEP 285
+R SP+ + R R S+ + SDP S PT+ TS P
Sbjct: 422 ERFDHSPTPSASSRSSRKSSHTAVSDPSSTPTKIPTDTSTP 462
>BC126159-1|AAI26160.1| 846|Homo sapiens clock homolog (mouse)
protein.
Length = 846
Score = 29.5 bits (63), Expect = 8.1
Identities = 15/41 (36%), Positives = 21/41 (51%)
Frame = +1
Query: 163 DRESASPSTRTALRPDRDSASPSHSDPRSEPTRSANRTSEP 285
+R SP+ + R R S+ + SDP S PT+ TS P
Sbjct: 422 ERFDHSPTPSASSRSSRKSSHTAVSDPSSTPTKIPTDTSTP 462
>BC126157-1|AAI26158.1| 846|Homo sapiens clock homolog (mouse)
protein.
Length = 846
Score = 29.5 bits (63), Expect = 8.1
Identities = 15/41 (36%), Positives = 21/41 (51%)
Frame = +1
Query: 163 DRESASPSTRTALRPDRDSASPSHSDPRSEPTRSANRTSEP 285
+R SP+ + R R S+ + SDP S PT+ TS P
Sbjct: 422 ERFDHSPTPSASSRSSRKSSHTAVSDPSSTPTKIPTDTSTP 462
>BC041878-1|AAH41878.1| 846|Homo sapiens CLOCK protein protein.
Length = 846
Score = 29.5 bits (63), Expect = 8.1
Identities = 15/41 (36%), Positives = 21/41 (51%)
Frame = +1
Query: 163 DRESASPSTRTALRPDRDSASPSHSDPRSEPTRSANRTSEP 285
+R SP+ + R R S+ + SDP S PT+ TS P
Sbjct: 422 ERFDHSPTPSASSRSSRKSSHTAVSDPSSTPTKIPTDTSTP 462
>AL133561-1|CAB63715.1| 580|Homo sapiens hypothetical protein
protein.
Length = 580
Score = 29.5 bits (63), Expect = 8.1
Identities = 16/40 (40%), Positives = 20/40 (50%)
Frame = +1
Query: 160 PDRESASPSTRTALRPDRDSASPSHSDPRSEPTRSANRTS 279
P RES S R + ASP+ PR+ PTR+ R S
Sbjct: 198 PPRESPRMSHRASPTRTPPRASPTRRPPRASPTRTPPRES 237
>AK223549-1|BAD97269.1| 846|Homo sapiens clock variant protein.
Length = 846
Score = 29.5 bits (63), Expect = 8.1
Identities = 15/41 (36%), Positives = 21/41 (51%)
Frame = +1
Query: 163 DRESASPSTRTALRPDRDSASPSHSDPRSEPTRSANRTSEP 285
+R SP+ + R R S+ + SDP S PT+ TS P
Sbjct: 422 ERFDHSPTPSASSRSSRKSSHTAVSDPSSTPTKIPTDTSTP 462
>AF172271-1|AAF03789.1| 1268|Homo sapiens Traf2 and NCK interacting
kinase, splice variant 8 protein.
Length = 1268
Score = 29.5 bits (63), Expect = 8.1
Identities = 22/75 (29%), Positives = 34/75 (45%), Gaps = 4/75 (5%)
Frame = +2
Query: 95 SSSNSALRSRIRVLNHSDPRSDLTVNPRPRVREPRSDLTVIPRPRATVIRVPNLRDPRTE 274
S + S+ R+R+R + S+ L P E D+T RP LR+ R E
Sbjct: 666 SQAGSSERTRVRANSKSEGSPVLPHEPAKVKPEESRDITRPSRPADLTALAKELRELRIE 725
Query: 275 ----PVNRVSNYSGS 307
P+ +V++YS S
Sbjct: 726 ETNRPMKKVTDYSSS 740
>AF172270-1|AAF03788.1| 1297|Homo sapiens Traf2 and NCK interacting
kinase, splice variant 7 protein.
Length = 1297
Score = 29.5 bits (63), Expect = 8.1
Identities = 22/75 (29%), Positives = 34/75 (45%), Gaps = 4/75 (5%)
Frame = +2
Query: 95 SSSNSALRSRIRVLNHSDPRSDLTVNPRPRVREPRSDLTVIPRPRATVIRVPNLRDPRTE 274
S + S+ R+R+R + S+ L P E D+T RP LR+ R E
Sbjct: 695 SQAGSSERTRVRANSKSEGSPVLPHEPAKVKPEESRDITRPSRPADLTALAKELRELRIE 754
Query: 275 ----PVNRVSNYSGS 307
P+ +V++YS S
Sbjct: 755 ETNRPMKKVTDYSSS 769
>AF172269-1|AAF03787.1| 1323|Homo sapiens Traf2 and NCK interacting
kinase, splice variant 6 protein.
Length = 1323
Score = 29.5 bits (63), Expect = 8.1
Identities = 22/75 (29%), Positives = 34/75 (45%), Gaps = 4/75 (5%)
Frame = +2
Query: 95 SSSNSALRSRIRVLNHSDPRSDLTVNPRPRVREPRSDLTVIPRPRATVIRVPNLRDPRTE 274
S + S+ R+R+R + S+ L P E D+T RP LR+ R E
Sbjct: 721 SQAGSSERTRVRANSKSEGSPVLPHEPAKVKPEESRDITRPSRPADLTALAKELRELRIE 780
Query: 275 ----PVNRVSNYSGS 307
P+ +V++YS S
Sbjct: 781 ETNRPMKKVTDYSSS 795
>AF172267-1|AAF03785.1| 1352|Homo sapiens Traf2 and NCK interacting
kinase, splice variant 4 protein.
Length = 1352
Score = 29.5 bits (63), Expect = 8.1
Identities = 22/75 (29%), Positives = 34/75 (45%), Gaps = 4/75 (5%)
Frame = +2
Query: 95 SSSNSALRSRIRVLNHSDPRSDLTVNPRPRVREPRSDLTVIPRPRATVIRVPNLRDPRTE 274
S + S+ R+R+R + S+ L P E D+T RP LR+ R E
Sbjct: 750 SQAGSSERTRVRANSKSEGSPVLPHEPAKVKPEESRDITRPSRPADLTALAKELRELRIE 809
Query: 275 ----PVNRVSNYSGS 307
P+ +V++YS S
Sbjct: 810 ETNRPMKKVTDYSSS 824
>AF011568-1|AAB83969.1| 846|Homo sapiens CLOCK protein.
Length = 846
Score = 29.5 bits (63), Expect = 8.1
Identities = 15/41 (36%), Positives = 21/41 (51%)
Frame = +1
Query: 163 DRESASPSTRTALRPDRDSASPSHSDPRSEPTRSANRTSEP 285
+R SP+ + R R S+ + SDP S PT+ TS P
Sbjct: 422 ERFDHSPTPSASSRSSRKSSHTAVSDPSSTPTKIPTDTSTP 462
>AB002332-1|BAA20792.2| 848|Homo sapiens KIAA0334 protein.
Length = 848
Score = 29.5 bits (63), Expect = 8.1
Identities = 15/41 (36%), Positives = 21/41 (51%)
Frame = +1
Query: 163 DRESASPSTRTALRPDRDSASPSHSDPRSEPTRSANRTSEP 285
+R SP+ + R R S+ + SDP S PT+ TS P
Sbjct: 424 ERFDHSPTPSASSRSSRKSSHTAVSDPSSTPTKIPTDTSTP 464
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 62,202,045
Number of Sequences: 237096
Number of extensions: 1166820
Number of successful extensions: 4117
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 3653
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4101
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5421005376
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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