Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0004_J07
         (524 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                27   0.12 
EF531707-1|ABP57431.1|  138|Apis mellifera structural cuticle pr...    24   0.83 
DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    23   1.4  
AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       23   1.9  
AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor typ...    22   4.4  
AY823258-1|AAX18443.1|  145|Apis mellifera pburs protein.              21   7.7  
AM420632-1|CAM06632.1|  145|Apis mellifera bursicon subunit beta...    21   7.7  

>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 27.1 bits (57), Expect = 0.12
 Identities = 12/28 (42%), Positives = 14/28 (50%)
 Frame = -2

Query: 313 AGQLSPGFYISQQHPVQTT*RRRVKPHH 230
           AG L P ++  Q HP Q    R   PHH
Sbjct: 309 AGFLPPSYHPHQHHPSQYHPHRGSSPHH 336


>EF531707-1|ABP57431.1|  138|Apis mellifera structural cuticle
           protein protein.
          Length = 138

 Score = 24.2 bits (50), Expect = 0.83
 Identities = 12/32 (37%), Positives = 18/32 (56%)
 Frame = -3

Query: 345 LVTSSRTELNVQGSYPQGFTFLSNILCRQHSG 250
           ++TS + E+N  G+Y   F   SN +  Q SG
Sbjct: 28  VITSQQLEVNFDGNYINNFE-TSNGISHQESG 58


>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 23.4 bits (48), Expect = 1.4
 Identities = 12/29 (41%), Positives = 14/29 (48%), Gaps = 2/29 (6%)
 Frame = -3

Query: 186 FSTGQIGNVHECVIEGGEYVCH--PEYYL 106
           F TG +GNV  CV+       H    YYL
Sbjct: 64  FVTGLVGNVSTCVVIARNKSMHTATNYYL 92


>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 23.0 bits (47), Expect = 1.9
 Identities = 8/30 (26%), Positives = 16/30 (53%)
 Frame = -1

Query: 239 ASSRSAFTFMPPVTRAIVSRPDRSVTCTNV 150
           A  R  FT+   + ++I+  PD+ +T   +
Sbjct: 501 ADVRPPFTYASLIRQSIIESPDKQLTLNEI 530


>AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor type
           D2 protein.
          Length = 456

 Score = 21.8 bits (44), Expect = 4.4
 Identities = 13/55 (23%), Positives = 20/55 (36%)
 Frame = -3

Query: 450 GVRRHRGHIFNAANLHAGTSESTESRLGTRSRSLCLVTSSRTELNVQGSYPQGFT 286
           G      H+F  A+      +  E  L T   + CL     T +N Q +    F+
Sbjct: 265 GTNTDARHLFRTASSTPEDLQDLEEPLTTIQHNNCLTRIPSTRINKQHTRGNNFS 319


>AY823258-1|AAX18443.1|  145|Apis mellifera pburs protein.
          Length = 145

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = +1

Query: 112 VFGVAHIFASFNDTFVHVTDLSGRETI 192
           +F +  IF   N+T   VTD    ET+
Sbjct: 13  IFLILIIFIYSNETIAQVTDDENCETL 39


>AM420632-1|CAM06632.1|  145|Apis mellifera bursicon subunit beta
           protein precursor protein.
          Length = 145

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = +1

Query: 112 VFGVAHIFASFNDTFVHVTDLSGRETI 192
           +F +  IF   N+T   VTD    ET+
Sbjct: 13  IFLILIIFIYSNETIAQVTDDENCETL 39


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 151,419
Number of Sequences: 438
Number of extensions: 3160
Number of successful extensions: 13
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14722920
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)