Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0004_J03
(493 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U36787-1|AAB19007.1| 268|Homo sapiens holocytochrome c-type syn... 114 2e-25
BC095455-1|AAH95455.1| 268|Homo sapiens holocytochrome c syntha... 114 2e-25
BC001691-1|AAH01691.1| 268|Homo sapiens HCCS protein protein. 114 2e-25
AF053015-1|AAC35274.1| 268|Homo sapiens putative holocytochrome... 114 2e-25
BC109250-1|AAI09251.1| 311|Homo sapiens olfactory receptor, fam... 33 0.54
BC109249-1|AAI09250.1| 311|Homo sapiens olfactory receptor, fam... 33 0.54
AB065780-1|BAC06000.1| 311|Homo sapiens seven transmembrane hel... 33 0.54
D21262-1|BAA04803.1| 707|Homo sapiens ORF protein. 30 5.0
BC006769-1|AAH06769.1| 418|Homo sapiens NOLC1 protein protein. 30 5.0
BC001883-1|AAH01883.1| 700|Homo sapiens nucleolar and coiled-bo... 30 5.0
AY820769-1|AAV67777.1| 700|Homo sapiens HCV NS5A trans-regulate... 30 5.0
AL500527-7|CAH72220.1| 699|Homo sapiens nucleolar and coiled-bo... 30 5.0
>U36787-1|AAB19007.1| 268|Homo sapiens holocytochrome c-type
synthetase protein.
Length = 268
Score = 114 bits (274), Expect = 2e-25
Identities = 61/130 (46%), Positives = 81/130 (62%), Gaps = 7/130 (5%)
Frame = +2
Query: 125 NSNPP-PECPMHKKTDENEAPKKKTYS--ECPIQ----QNDRDINPYXXXXXXXXXXXXD 283
N+ P P C KKT A +++ Y ECPI+ +N +++P D
Sbjct: 38 NTEPSGPTC--EKKTYSVPAHQERAYEYVECPIRGTAAENKENLDPSNLMPPPNQTPAPD 95
Query: 284 QPFPLPTQRQVSTIPRAMPDGSTEFWVYPSQQMFWNAMLRKGWRWNNEDINPKDMEDIIK 463
QPF L T R+ S+IPRA S + WVYPS+QMFWNAML+KGW+W +EDI+ KDM +II+
Sbjct: 96 QPFALSTVREESSIPRA---DSEKKWVYPSEQMFWNAMLKKGWKWKDEDISQKDMYNIIR 152
Query: 464 IHNAHNEQAW 493
IHN +NEQAW
Sbjct: 153 IHNQNNEQAW 162
>BC095455-1|AAH95455.1| 268|Homo sapiens holocytochrome c synthase
(cytochrome c heme-lyase) protein.
Length = 268
Score = 114 bits (274), Expect = 2e-25
Identities = 61/130 (46%), Positives = 81/130 (62%), Gaps = 7/130 (5%)
Frame = +2
Query: 125 NSNPP-PECPMHKKTDENEAPKKKTYS--ECPIQ----QNDRDINPYXXXXXXXXXXXXD 283
N+ P P C KKT A +++ Y ECPI+ +N +++P D
Sbjct: 38 NTEPSGPTC--EKKTYSVPAHQERAYEYVECPIRGTAAENKENLDPSNLMPPPNQTPAPD 95
Query: 284 QPFPLPTQRQVSTIPRAMPDGSTEFWVYPSQQMFWNAMLRKGWRWNNEDINPKDMEDIIK 463
QPF L T R+ S+IPRA S + WVYPS+QMFWNAML+KGW+W +EDI+ KDM +II+
Sbjct: 96 QPFALSTVREESSIPRA---DSEKKWVYPSEQMFWNAMLKKGWKWKDEDISQKDMYNIIR 152
Query: 464 IHNAHNEQAW 493
IHN +NEQAW
Sbjct: 153 IHNQNNEQAW 162
>BC001691-1|AAH01691.1| 268|Homo sapiens HCCS protein protein.
Length = 268
Score = 114 bits (274), Expect = 2e-25
Identities = 61/130 (46%), Positives = 81/130 (62%), Gaps = 7/130 (5%)
Frame = +2
Query: 125 NSNPP-PECPMHKKTDENEAPKKKTYS--ECPIQ----QNDRDINPYXXXXXXXXXXXXD 283
N+ P P C KKT A +++ Y ECPI+ +N +++P D
Sbjct: 38 NTEPSGPTC--EKKTYSVPAHQERAYEYVECPIRGTAAENKENLDPSNLMPPPNQTPAPD 95
Query: 284 QPFPLPTQRQVSTIPRAMPDGSTEFWVYPSQQMFWNAMLRKGWRWNNEDINPKDMEDIIK 463
QPF L T R+ S+IPRA S + WVYPS+QMFWNAML+KGW+W +EDI+ KDM +II+
Sbjct: 96 QPFALSTVREESSIPRA---DSEKKWVYPSEQMFWNAMLKKGWKWKDEDISQKDMYNIIR 152
Query: 464 IHNAHNEQAW 493
IHN +NEQAW
Sbjct: 153 IHNQNNEQAW 162
>AF053015-1|AAC35274.1| 268|Homo sapiens putative holocytochrome
c-type synthetase protein.
Length = 268
Score = 114 bits (274), Expect = 2e-25
Identities = 61/130 (46%), Positives = 81/130 (62%), Gaps = 7/130 (5%)
Frame = +2
Query: 125 NSNPP-PECPMHKKTDENEAPKKKTYS--ECPIQ----QNDRDINPYXXXXXXXXXXXXD 283
N+ P P C KKT A +++ Y ECPI+ +N +++P D
Sbjct: 38 NTEPSGPTC--EKKTYSVPAHQERAYEYVECPIRGTAAENKENLDPSNLMPPPNQTPAPD 95
Query: 284 QPFPLPTQRQVSTIPRAMPDGSTEFWVYPSQQMFWNAMLRKGWRWNNEDINPKDMEDIIK 463
QPF L T R+ S+IPRA S + WVYPS+QMFWNAML+KGW+W +EDI+ KDM +II+
Sbjct: 96 QPFALSTVREESSIPRA---DSEKKWVYPSEQMFWNAMLKKGWKWKDEDISQKDMYNIIR 152
Query: 464 IHNAHNEQAW 493
IHN +NEQAW
Sbjct: 153 IHNQNNEQAW 162
>BC109250-1|AAI09251.1| 311|Homo sapiens olfactory receptor, family
5, subfamily L, member 1 protein.
Length = 311
Score = 33.1 bits (72), Expect = 0.54
Identities = 16/46 (34%), Positives = 23/46 (50%)
Frame = -1
Query: 148 TFWWRIRILQASSCFIIGLCCYFIAHVCDLRKTKF*YRGYISPHIF 11
T W++R+ AS C+ G C I H+C + F YR + H F
Sbjct: 135 TMSWKVRVELASCCYFCGTVCSLI-HLCLALRIPF-YRSNVINHFF 178
>BC109249-1|AAI09250.1| 311|Homo sapiens olfactory receptor, family
5, subfamily L, member 1 protein.
Length = 311
Score = 33.1 bits (72), Expect = 0.54
Identities = 16/46 (34%), Positives = 23/46 (50%)
Frame = -1
Query: 148 TFWWRIRILQASSCFIIGLCCYFIAHVCDLRKTKF*YRGYISPHIF 11
T W++R+ AS C+ G C I H+C + F YR + H F
Sbjct: 135 TMSWKVRVELASCCYFCGTVCSLI-HLCLALRIPF-YRSNVINHFF 178
>AB065780-1|BAC06000.1| 311|Homo sapiens seven transmembrane helix
receptor protein.
Length = 311
Score = 33.1 bits (72), Expect = 0.54
Identities = 16/46 (34%), Positives = 23/46 (50%)
Frame = -1
Query: 148 TFWWRIRILQASSCFIIGLCCYFIAHVCDLRKTKF*YRGYISPHIF 11
T W++R+ AS C+ G C I H+C + F YR + H F
Sbjct: 135 TMSWKVRVELASCCYFCGTVCSLI-HLCLALRIPF-YRSNVINHFF 178
>D21262-1|BAA04803.1| 707|Homo sapiens ORF protein.
Length = 707
Score = 29.9 bits (64), Expect = 5.0
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = +2
Query: 104 KTTTGLKNSNPPPECPMHKKTDENEAPKKKTYSECPIQQND 226
K G +S PPP P KK+ + PKK + P++ ++
Sbjct: 291 KNKPGPYSSVPPPSAPPPKKSLGTQPPKKAVEKQQPVESSE 331
>BC006769-1|AAH06769.1| 418|Homo sapiens NOLC1 protein protein.
Length = 418
Score = 29.9 bits (64), Expect = 5.0
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = +2
Query: 104 KTTTGLKNSNPPPECPMHKKTDENEAPKKKTYSECPIQQND 226
K G +S PPP P KK+ + PKK + P++ ++
Sbjct: 2 KNKPGPYSSVPPPSAPPPKKSLGTQPPKKAVEKQQPVESSE 42
>BC001883-1|AAH01883.1| 700|Homo sapiens nucleolar and coiled-body
phosphoprotein 1 protein.
Length = 700
Score = 29.9 bits (64), Expect = 5.0
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = +2
Query: 104 KTTTGLKNSNPPPECPMHKKTDENEAPKKKTYSECPIQQND 226
K G +S PPP P KK+ + PKK + P++ ++
Sbjct: 284 KNKPGPYSSVPPPSAPPPKKSLGTQPPKKAVEKQQPVESSE 324
>AY820769-1|AAV67777.1| 700|Homo sapiens HCV NS5A trans-regulated
protein 13 protein.
Length = 700
Score = 29.9 bits (64), Expect = 5.0
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = +2
Query: 104 KTTTGLKNSNPPPECPMHKKTDENEAPKKKTYSECPIQQND 226
K G +S PPP P KK+ + PKK + P++ ++
Sbjct: 284 KNKPGPYSSVPPPSAPPPKKSLGTQPPKKAVEKQQPVESSE 324
>AL500527-7|CAH72220.1| 699|Homo sapiens nucleolar and coiled-body
phosphoprotein 1 protein.
Length = 699
Score = 29.9 bits (64), Expect = 5.0
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = +2
Query: 104 KTTTGLKNSNPPPECPMHKKTDENEAPKKKTYSECPIQQND 226
K G +S PPP P KK+ + PKK + P++ ++
Sbjct: 283 KNKPGPYSSVPPPSAPPPKKSLGTQPPKKAVEKQQPVESSE 323
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 70,682,412
Number of Sequences: 237096
Number of extensions: 1383143
Number of successful extensions: 3304
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 3156
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3291
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4423060356
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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