Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0004_J03
         (493 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related pro...    23   1.8  
AB194707-1|BAD69622.1|  247|Apis mellifera heme oxygenase protein.     22   3.1  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    22   4.1  
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          21   9.4  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      21   9.4  
DQ026038-1|AAY87897.1|  520|Apis mellifera nicotinic acetylcholi...    21   9.4  
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    21   9.4  
AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor pr...    21   9.4  

>DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related
           protein STG-1 protein.
          Length = 397

 Score = 23.0 bits (47), Expect = 1.8
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = -1

Query: 118 ASSCFIIGLCCYFIAHV 68
           A+S  ++   CYF AHV
Sbjct: 154 ATSLLVVAEVCYFTAHV 170



 Score = 21.0 bits (42), Expect = 7.1
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = -2

Query: 303 VGKGNGWSGAGCWLAGGI 250
           VG  NG  G G  +A G+
Sbjct: 41  VGANNGGGGGGLGIASGL 58


>AB194707-1|BAD69622.1|  247|Apis mellifera heme oxygenase protein.
          Length = 247

 Score = 22.2 bits (45), Expect = 3.1
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = -1

Query: 127 ILQASSCFIIGLCCYFIAHVCDLRK 53
           IL+ + CF+I +   F+A     RK
Sbjct: 222 ILKKTVCFVIPIMLLFLAFFVSFRK 246


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 21.8 bits (44), Expect = 4.1
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = +2

Query: 119 LKNSNPPPECPMHKKTD 169
           L  +  PP+CP  +K D
Sbjct: 559 LSKTPQPPQCPRFRKLD 575


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 20.6 bits (41), Expect = 9.4
 Identities = 6/13 (46%), Positives = 10/13 (76%)
 Frame = -3

Query: 245 YKDLCLYHSVEWD 207
           +KD+ +YH  E+D
Sbjct: 667 FKDILIYHKDEFD 679


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 20.6 bits (41), Expect = 9.4
 Identities = 6/13 (46%), Positives = 10/13 (76%)
 Frame = -3

Query: 245 YKDLCLYHSVEWD 207
           +KD+ +YH  E+D
Sbjct: 667 FKDILIYHKDEFD 679


>DQ026038-1|AAY87897.1|  520|Apis mellifera nicotinic acetylcholine
           receptor beta1subunit protein.
          Length = 520

 Score = 20.6 bits (41), Expect = 9.4
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -1

Query: 130 RILQASSCFIIGLC 89
           RIL  S+ F +GLC
Sbjct: 10  RILLISAVFCVGLC 23


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 20.6 bits (41), Expect = 9.4
 Identities = 5/11 (45%), Positives = 8/11 (72%)
 Frame = +2

Query: 401 RKGWRWNNEDI 433
           R  W W+N+D+
Sbjct: 837 RPYWNWSNQDV 847


>AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor
           protein.
          Length = 501

 Score = 20.6 bits (41), Expect = 9.4
 Identities = 9/33 (27%), Positives = 15/33 (45%)
 Frame = +2

Query: 122 KNSNPPPECPMHKKTDENEAPKKKTYSECPIQQ 220
           ++S+    C  H        P+K   S+CP+ Q
Sbjct: 284 RSSSASTTCSGHTVRCFTGGPRKSHESQCPMLQ 316


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 132,311
Number of Sequences: 438
Number of extensions: 2694
Number of successful extensions: 9
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 13544190
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)