Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0004_J01
         (446 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...   132   2e-33
AB264335-1|BAF44090.1|   87|Apis mellifera ecdysone-induced prot...   113   8e-28
AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein...    62   2e-12
AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein...    62   2e-12
AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor ...    52   4e-09
AB095514-1|BAC76336.1|   72|Apis mellifera ecdyson receptor prot...    50   9e-09

>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score =  132 bits (319), Expect = 2e-33
 Identities = 59/60 (98%), Positives = 60/60 (100%)
 Frame = +3

Query: 267 QGFFRRSIQQKIQYRPCTKNQQCSILRINRNRCQYCRLKKCIAVGMSRDAVRFGRVPKRE 446
           +GFFRRSIQQKIQYRPCTKNQQCSILRINRNRCQYCRLKKCIAVGMSRDAVRFGRVPKRE
Sbjct: 88  KGFFRRSIQQKIQYRPCTKNQQCSILRINRNRCQYCRLKKCIAVGMSRDAVRFGRVPKRE 147


>AB264335-1|BAF44090.1|   87|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 87

 Score =  113 bits (272), Expect = 8e-28
 Identities = 50/51 (98%), Positives = 50/51 (98%)
 Frame = +3

Query: 261 DPQGFFRRSIQQKIQYRPCTKNQQCSILRINRNRCQYCRLKKCIAVGMSRD 413
           D QGFFRRSIQQKIQYRPCTKNQQCSILRINRNRCQYCRLKKCIAVGMSRD
Sbjct: 37  DSQGFFRRSIQQKIQYRPCTKNQQCSILRINRNRCQYCRLKKCIAVGMSRD 87


>AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 62.5 bits (145), Expect = 2e-12
 Identities = 26/60 (43%), Positives = 42/60 (70%)
 Frame = +3

Query: 267 QGFFRRSIQQKIQYRPCTKNQQCSILRINRNRCQYCRLKKCIAVGMSRDAVRFGRVPKRE 446
           +GFF+R++++ + Y  C + + C I +  RNRCQYCR +KC+A+GM R+AV+  R   +E
Sbjct: 131 KGFFKRTVRKDLSYA-CREEKSCIIDKRQRNRCQYCRYQKCLAMGMKREAVQEERQRTKE 189


>AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 62.5 bits (145), Expect = 2e-12
 Identities = 26/60 (43%), Positives = 42/60 (70%)
 Frame = +3

Query: 267 QGFFRRSIQQKIQYRPCTKNQQCSILRINRNRCQYCRLKKCIAVGMSRDAVRFGRVPKRE 446
           +GFF+R++++ + Y  C + + C I +  RNRCQYCR +KC+A+GM R+AV+  R   +E
Sbjct: 131 KGFFKRTVRKDLSYA-CREEKSCIIDKRQRNRCQYCRYQKCLAMGMKREAVQEERQRTKE 189


>AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor A
           isoform protein.
          Length = 567

 Score = 51.6 bits (118), Expect = 4e-09
 Identities = 24/51 (47%), Positives = 30/51 (58%)
 Frame = +3

Query: 267 QGFFRRSIQQKIQYRPCTKNQQCSILRINRNRCQYCRLKKCIAVGMSRDAV 419
           +GFFRRSI +   Y+ C     C I    R +CQ CRLKKC+ VGM  + V
Sbjct: 208 KGFFRRSITKNAVYQ-CKYGNNCEIDMYMRRKCQECRLKKCLTVGMRPECV 257


>AB095514-1|BAC76336.1|   72|Apis mellifera ecdyson receptor
           protein.
          Length = 72

 Score = 50.4 bits (115), Expect = 9e-09
 Identities = 23/46 (50%), Positives = 28/46 (60%)
 Frame = +3

Query: 267 QGFFRRSIQQKIQYRPCTKNQQCSILRINRNRCQYCRLKKCIAVGM 404
           +GFFRRSI +   Y+ C     C I    R +CQ CRLKKC+ VGM
Sbjct: 5   KGFFRRSITKNAVYQ-CKYGNNCEIDMYMRRKCQECRLKKCLTVGM 49


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 102,903
Number of Sequences: 438
Number of extensions: 1440
Number of successful extensions: 11
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 11697255
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)