BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0004_I21
(525 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC027040-1|AAH27040.1| 396|Homo sapiens Smad nuclear interactin... 87 3e-17
AY081909-1|AAL91140.1| 396|Homo sapiens Smad nuclear-interactin... 87 3e-17
AL034379-8|CAI20552.1| 396|Homo sapiens Smad nuclear interactin... 87 3e-17
AK027622-1|BAB55241.1| 396|Homo sapiens protein ( Homo sapiens ... 87 3e-17
AK022615-1|BAB14134.1| 396|Homo sapiens protein ( Homo sapiens ... 86 6e-17
AB006622-1|BAA22953.3| 1573|Homo sapiens KIAA0284 protein protein. 45 1e-04
BC099739-1|AAH99739.1| 796|Homo sapiens solute carrier family 4... 40 0.004
BC099711-1|AAH99711.1| 796|Homo sapiens solute carrier family 4... 40 0.004
BC098358-1|AAH98358.1| 796|Homo sapiens solute carrier family 4... 40 0.004
BC098302-1|AAH98302.1| 796|Homo sapiens solute carrier family 4... 40 0.004
AY028435-1|AAK29177.1| 796|Homo sapiens adaptor protein kanadap... 40 0.004
AK001486-1|BAA91718.1| 796|Homo sapiens protein ( Homo sapiens ... 40 0.004
AC074091-2|AAX93203.1| 796|Homo sapiens unknown protein. 40 0.004
BC093017-1|AAH93017.1| 351|Homo sapiens protein phosphatase 1, ... 37 0.050
BC001597-1|AAH01597.1| 318|Homo sapiens PPP1R8 protein protein. 37 0.050
AL109927-13|CAI21779.1| 351|Homo sapiens protein phosphatase 1,... 37 0.050
AL020997-10|CAI20576.1| 351|Homo sapiens protein phosphatase 1,... 37 0.050
AF126488-1|AAD22486.1| 351|Homo sapiens nuclear inhibitor of ph... 37 0.050
AF064757-1|AAD24669.1| 351|Homo sapiens nuclear inhibitor of pr... 37 0.050
AF061958-1|AAD31541.1| 351|Homo sapiens nuclear inhibitor of pr... 37 0.050
AM422012-1|CAM11329.1| 73|Homo sapiens MLL-KIAA0284 fusion pro... 36 0.12
BC146790-1|AAI46791.1| 1460|Homo sapiens centrosomal protein 170... 34 0.27
BC050722-1|AAH50722.1| 448|Homo sapiens CEP170 protein protein. 34 0.27
AL606534-4|CAI12944.1| 1584|Homo sapiens centrosomal protein 170... 34 0.27
AL606534-3|CAI12943.1| 1486|Homo sapiens centrosomal protein 170... 34 0.27
AL606534-2|CAI12945.1| 1460|Homo sapiens centrosomal protein 170... 34 0.27
AB022659-1|BAA83380.1| 1460|Homo sapiens KARP-1-binding protein ... 34 0.27
AB022658-1|BAA83379.1| 1486|Homo sapiens KARP-1-binding protein ... 34 0.27
AB022657-1|BAA83378.1| 1584|Homo sapiens KARP-1-binding protein ... 34 0.27
AB007939-1|BAA32315.2| 1472|Homo sapiens KIAA0470 protein protein. 34 0.27
BC115701-1|AAI15702.1| 828|Homo sapiens SLMAP protein protein. 32 1.4
BC114627-1|AAI14628.1| 790|Homo sapiens SLMAP protein protein. 32 1.4
AL391094-3|CAI23268.1| 785|Homo sapiens forkhead-associated (FH... 32 1.4
AL158174-1|CAI21811.1| 785|Homo sapiens forkhead-associated (FH... 32 1.4
AL031283-5|CAI21427.1| 785|Homo sapiens forkhead-associated (FH... 32 1.4
AK124200-1|BAC85803.1| 506|Homo sapiens protein ( Homo sapiens ... 32 1.4
M22734-1|AAA60048.1| 1089|Homo sapiens platelet-derived growth f... 31 1.9
M21574-1|AAA96715.1| 1089|Homo sapiens platelet-derived growth f... 31 1.9
D50017-1|BAA08742.1| 1089|Homo sapiens alpha-platelet-derived gr... 31 1.9
AY229892-1|AAP69563.1| 849|Homo sapiens FIP1L1/PDGFRA fusion pr... 31 1.9
>BC027040-1|AAH27040.1| 396|Homo sapiens Smad nuclear interacting
protein 1 protein.
Length = 396
Score = 87.4 bits (207), Expect = 3e-17
Identities = 38/51 (74%), Positives = 46/51 (90%)
Frame = +2
Query: 11 VRPYIIDLESANGTFVNNKKIEPRRYVELLERDVVKYGFSQREYVLLHENS 163
V+PYIIDL S NGTF+NNK+IEP+RY EL E+DV+K+GFS REYVLLHE+S
Sbjct: 324 VKPYIIDLGSGNGTFLNNKRIEPQRYYELKEKDVLKFGFSSREYVLLHESS 374
>AY081909-1|AAL91140.1| 396|Homo sapiens Smad nuclear-interacting
protein 1 protein.
Length = 396
Score = 87.4 bits (207), Expect = 3e-17
Identities = 38/51 (74%), Positives = 46/51 (90%)
Frame = +2
Query: 11 VRPYIIDLESANGTFVNNKKIEPRRYVELLERDVVKYGFSQREYVLLHENS 163
V+PYIIDL S NGTF+NNK+IEP+RY EL E+DV+K+GFS REYVLLHE+S
Sbjct: 324 VKPYIIDLGSGNGTFLNNKRIEPQRYYELKEKDVLKFGFSSREYVLLHESS 374
>AL034379-8|CAI20552.1| 396|Homo sapiens Smad nuclear interacting
protein 1 protein.
Length = 396
Score = 87.4 bits (207), Expect = 3e-17
Identities = 38/51 (74%), Positives = 46/51 (90%)
Frame = +2
Query: 11 VRPYIIDLESANGTFVNNKKIEPRRYVELLERDVVKYGFSQREYVLLHENS 163
V+PYIIDL S NGTF+NNK+IEP+RY EL E+DV+K+GFS REYVLLHE+S
Sbjct: 324 VKPYIIDLGSGNGTFLNNKRIEPQRYYELKEKDVLKFGFSSREYVLLHESS 374
>AK027622-1|BAB55241.1| 396|Homo sapiens protein ( Homo sapiens
cDNA FLJ14716 fis, clone NT2RP3001150, weakly similar to
TRANSCRIPTION TERMINATION FACTOR RHO. ).
Length = 396
Score = 87.4 bits (207), Expect = 3e-17
Identities = 38/51 (74%), Positives = 46/51 (90%)
Frame = +2
Query: 11 VRPYIIDLESANGTFVNNKKIEPRRYVELLERDVVKYGFSQREYVLLHENS 163
V+PYIIDL S NGTF+NNK+IEP+RY EL E+DV+K+GFS REYVLLHE+S
Sbjct: 324 VKPYIIDLGSGNGTFLNNKRIEPQRYYELKEKDVLKFGFSSREYVLLHESS 374
>AK022615-1|BAB14134.1| 396|Homo sapiens protein ( Homo sapiens
cDNA FLJ12553 fis, clone NT2RM4000733, weakly similar to
TRANSCRIPTION TERMINATION FACTOR RHO. ).
Length = 396
Score = 86.2 bits (204), Expect = 6e-17
Identities = 38/51 (74%), Positives = 46/51 (90%)
Frame = +2
Query: 11 VRPYIIDLESANGTFVNNKKIEPRRYVELLERDVVKYGFSQREYVLLHENS 163
V+PYIIDL S NGTF+NNK+IEP+RY EL E+DV+K+GFS REYVLLHE+S
Sbjct: 324 VKPYIIDLGSGNGTFLNNKRIEPQRYYELKEKDVLKFGFSIREYVLLHESS 374
>AB006622-1|BAA22953.3| 1573|Homo sapiens KIAA0284 protein protein.
Length = 1573
Score = 45.2 bits (102), Expect = 1e-04
Identities = 19/43 (44%), Positives = 29/43 (67%)
Frame = +2
Query: 20 YIIDLESANGTFVNNKKIEPRRYVELLERDVVKYGFSQREYVL 148
++ DL S NGTFVN+ +I ++YV L DV+++G+ YVL
Sbjct: 75 WVKDLGSLNGTFVNDMRIPDQKYVTLKLNDVIRFGYDSNMYVL 117
>BC099739-1|AAH99739.1| 796|Homo sapiens solute carrier family 4
(anion exchanger), member 1, adaptor protein protein.
Length = 796
Score = 40.3 bits (90), Expect = 0.004
Identities = 18/43 (41%), Positives = 27/43 (62%)
Frame = +2
Query: 20 YIIDLESANGTFVNNKKIEPRRYVELLERDVVKYGFSQREYVL 148
Y+ DL S +GTF+N +I PR Y + VV++G S R ++L
Sbjct: 232 YLYDLGSTHGTFLNKTRIPPRTYCRVHVGHVVRFGGSTRLFIL 274
>BC099711-1|AAH99711.1| 796|Homo sapiens solute carrier family 4
(anion exchanger), member 1, adaptor protein protein.
Length = 796
Score = 40.3 bits (90), Expect = 0.004
Identities = 18/43 (41%), Positives = 27/43 (62%)
Frame = +2
Query: 20 YIIDLESANGTFVNNKKIEPRRYVELLERDVVKYGFSQREYVL 148
Y+ DL S +GTF+N +I PR Y + VV++G S R ++L
Sbjct: 232 YLYDLGSTHGTFLNKTRIPPRTYCRVHVGHVVRFGGSTRLFIL 274
>BC098358-1|AAH98358.1| 796|Homo sapiens solute carrier family 4
(anion exchanger), member 1, adaptor protein protein.
Length = 796
Score = 40.3 bits (90), Expect = 0.004
Identities = 18/43 (41%), Positives = 27/43 (62%)
Frame = +2
Query: 20 YIIDLESANGTFVNNKKIEPRRYVELLERDVVKYGFSQREYVL 148
Y+ DL S +GTF+N +I PR Y + VV++G S R ++L
Sbjct: 232 YLYDLGSTHGTFLNKTRIPPRTYCRVHVGHVVRFGGSTRLFIL 274
>BC098302-1|AAH98302.1| 796|Homo sapiens solute carrier family 4
(anion exchanger), member 1, adaptor protein protein.
Length = 796
Score = 40.3 bits (90), Expect = 0.004
Identities = 18/43 (41%), Positives = 27/43 (62%)
Frame = +2
Query: 20 YIIDLESANGTFVNNKKIEPRRYVELLERDVVKYGFSQREYVL 148
Y+ DL S +GTF+N +I PR Y + VV++G S R ++L
Sbjct: 232 YLYDLGSTHGTFLNKTRIPPRTYCRVHVGHVVRFGGSTRLFIL 274
>AY028435-1|AAK29177.1| 796|Homo sapiens adaptor protein kanadaptin
protein.
Length = 796
Score = 40.3 bits (90), Expect = 0.004
Identities = 18/43 (41%), Positives = 27/43 (62%)
Frame = +2
Query: 20 YIIDLESANGTFVNNKKIEPRRYVELLERDVVKYGFSQREYVL 148
Y+ DL S +GTF+N +I PR Y + VV++G S R ++L
Sbjct: 232 YLYDLGSTHGTFLNKTRIPPRTYCRVHVGHVVRFGGSTRLFIL 274
>AK001486-1|BAA91718.1| 796|Homo sapiens protein ( Homo sapiens
cDNA FLJ10624 fis, clone NT2RP2005525, highly similar to
Mus musculus kanadaptin mRNA. ).
Length = 796
Score = 40.3 bits (90), Expect = 0.004
Identities = 18/43 (41%), Positives = 27/43 (62%)
Frame = +2
Query: 20 YIIDLESANGTFVNNKKIEPRRYVELLERDVVKYGFSQREYVL 148
Y+ DL S +GTF+N +I PR Y + VV++G S R ++L
Sbjct: 232 YLYDLGSTHGTFLNKTRIPPRTYCRVHVGHVVRFGGSTRLFIL 274
>AC074091-2|AAX93203.1| 796|Homo sapiens unknown protein.
Length = 796
Score = 40.3 bits (90), Expect = 0.004
Identities = 18/43 (41%), Positives = 27/43 (62%)
Frame = +2
Query: 20 YIIDLESANGTFVNNKKIEPRRYVELLERDVVKYGFSQREYVL 148
Y+ DL S +GTF+N +I PR Y + VV++G S R ++L
Sbjct: 232 YLYDLGSTHGTFLNKTRIPPRTYCRVHVGHVVRFGGSTRLFIL 274
>BC093017-1|AAH93017.1| 351|Homo sapiens protein phosphatase 1,
regulatory (inhibitor) subunit 8 protein.
Length = 351
Score = 36.7 bits (81), Expect = 0.050
Identities = 16/45 (35%), Positives = 27/45 (60%)
Frame = +2
Query: 14 RPYIIDLESANGTFVNNKKIEPRRYVELLERDVVKYGFSQREYVL 148
R ++IDL S +GTF+ + ++EP + ++ V +G S R Y L
Sbjct: 82 RVFLIDLNSTHGTFLGHIRLEPHKPQQIPIDSTVSFGASTRAYTL 126
>BC001597-1|AAH01597.1| 318|Homo sapiens PPP1R8 protein protein.
Length = 318
Score = 36.7 bits (81), Expect = 0.050
Identities = 16/45 (35%), Positives = 27/45 (60%)
Frame = +2
Query: 14 RPYIIDLESANGTFVNNKKIEPRRYVELLERDVVKYGFSQREYVL 148
R ++IDL S +GTF+ + ++EP + ++ V +G S R Y L
Sbjct: 49 RVFLIDLNSTHGTFLGHIRLEPHKPQQIPIDSTVSFGASTRAYTL 93
>AL109927-13|CAI21779.1| 351|Homo sapiens protein phosphatase 1,
regulatory (inhibitor) subunit 8 protein.
Length = 351
Score = 36.7 bits (81), Expect = 0.050
Identities = 16/45 (35%), Positives = 27/45 (60%)
Frame = +2
Query: 14 RPYIIDLESANGTFVNNKKIEPRRYVELLERDVVKYGFSQREYVL 148
R ++IDL S +GTF+ + ++EP + ++ V +G S R Y L
Sbjct: 82 RVFLIDLNSTHGTFLGHIRLEPHKPQQIPIDSTVSFGASTRAYTL 126
>AL020997-10|CAI20576.1| 351|Homo sapiens protein phosphatase 1,
regulatory (inhibitor) subunit 8 protein.
Length = 351
Score = 36.7 bits (81), Expect = 0.050
Identities = 16/45 (35%), Positives = 27/45 (60%)
Frame = +2
Query: 14 RPYIIDLESANGTFVNNKKIEPRRYVELLERDVVKYGFSQREYVL 148
R ++IDL S +GTF+ + ++EP + ++ V +G S R Y L
Sbjct: 82 RVFLIDLNSTHGTFLGHIRLEPHKPQQIPIDSTVSFGASTRAYTL 126
>AF126488-1|AAD22486.1| 351|Homo sapiens nuclear inhibitor of
phosphatase-1 protein.
Length = 351
Score = 36.7 bits (81), Expect = 0.050
Identities = 16/45 (35%), Positives = 27/45 (60%)
Frame = +2
Query: 14 RPYIIDLESANGTFVNNKKIEPRRYVELLERDVVKYGFSQREYVL 148
R ++IDL S +GTF+ + ++EP + ++ V +G S R Y L
Sbjct: 82 RVFLIDLNSTHGTFLGHIRLEPHKPQQIPIDSTVSFGASTRAYTL 126
>AF064757-1|AAD24669.1| 351|Homo sapiens nuclear inhibitor of
protein phosphatase-1 alpha protein.
Length = 351
Score = 36.7 bits (81), Expect = 0.050
Identities = 16/45 (35%), Positives = 27/45 (60%)
Frame = +2
Query: 14 RPYIIDLESANGTFVNNKKIEPRRYVELLERDVVKYGFSQREYVL 148
R ++IDL S +GTF+ + ++EP + ++ V +G S R Y L
Sbjct: 82 RVFLIDLNSTHGTFLGHIRLEPHKPQQIPIDSTVSFGASTRAYTL 126
>AF061958-1|AAD31541.1| 351|Homo sapiens nuclear inhibitor of
protein phosphatase-1 alpha protein.
Length = 351
Score = 36.7 bits (81), Expect = 0.050
Identities = 16/45 (35%), Positives = 27/45 (60%)
Frame = +2
Query: 14 RPYIIDLESANGTFVNNKKIEPRRYVELLERDVVKYGFSQREYVL 148
R ++IDL S +GTF+ + ++EP + ++ V +G S R Y L
Sbjct: 82 RVFLIDLNSTHGTFLGHIRLEPHKPQQIPIDSTVSFGASTRAYTL 126
>AM422012-1|CAM11329.1| 73|Homo sapiens MLL-KIAA0284 fusion
protein protein.
Length = 73
Score = 35.5 bits (78), Expect = 0.12
Identities = 15/43 (34%), Positives = 25/43 (58%)
Frame = +2
Query: 20 YIIDLESANGTFVNNKKIEPRRYVELLERDVVKYGFSQREYVL 148
Y + + TFVN+ +I ++YV L DV+++G+ YVL
Sbjct: 5 YPVKQKPKEKTFVNDMRIPDQKYVTLKLNDVIRFGYDSNMYVL 47
>BC146790-1|AAI46791.1| 1460|Homo sapiens centrosomal protein 170kDa
protein.
Length = 1460
Score = 34.3 bits (75), Expect = 0.27
Identities = 14/41 (34%), Positives = 25/41 (60%)
Frame = +2
Query: 29 DLESANGTFVNNKKIEPRRYVELLERDVVKYGFSQREYVLL 151
DL S NGTFVN+ +I + Y+ L D +++G+ + ++
Sbjct: 59 DLGSLNGTFVNDVRIPEQTYITLKLEDKLRFGYDTNLFTVV 99
>BC050722-1|AAH50722.1| 448|Homo sapiens CEP170 protein protein.
Length = 448
Score = 34.3 bits (75), Expect = 0.27
Identities = 14/41 (34%), Positives = 25/41 (60%)
Frame = +2
Query: 29 DLESANGTFVNNKKIEPRRYVELLERDVVKYGFSQREYVLL 151
DL S NGTFVN+ +I + Y+ L D +++G+ + ++
Sbjct: 59 DLGSLNGTFVNDVRIPEQTYITLKLEDKLRFGYDTNLFTVV 99
>AL606534-4|CAI12944.1| 1584|Homo sapiens centrosomal protein 170kDa
protein.
Length = 1584
Score = 34.3 bits (75), Expect = 0.27
Identities = 14/41 (34%), Positives = 25/41 (60%)
Frame = +2
Query: 29 DLESANGTFVNNKKIEPRRYVELLERDVVKYGFSQREYVLL 151
DL S NGTFVN+ +I + Y+ L D +++G+ + ++
Sbjct: 59 DLGSLNGTFVNDVRIPEQTYITLKLEDKLRFGYDTNLFTVV 99
>AL606534-3|CAI12943.1| 1486|Homo sapiens centrosomal protein 170kDa
protein.
Length = 1486
Score = 34.3 bits (75), Expect = 0.27
Identities = 14/41 (34%), Positives = 25/41 (60%)
Frame = +2
Query: 29 DLESANGTFVNNKKIEPRRYVELLERDVVKYGFSQREYVLL 151
DL S NGTFVN+ +I + Y+ L D +++G+ + ++
Sbjct: 59 DLGSLNGTFVNDVRIPEQTYITLKLEDKLRFGYDTNLFTVV 99
>AL606534-2|CAI12945.1| 1460|Homo sapiens centrosomal protein 170kDa
protein.
Length = 1460
Score = 34.3 bits (75), Expect = 0.27
Identities = 14/41 (34%), Positives = 25/41 (60%)
Frame = +2
Query: 29 DLESANGTFVNNKKIEPRRYVELLERDVVKYGFSQREYVLL 151
DL S NGTFVN+ +I + Y+ L D +++G+ + ++
Sbjct: 59 DLGSLNGTFVNDVRIPEQTYITLKLEDKLRFGYDTNLFTVV 99
>AB022659-1|BAA83380.1| 1460|Homo sapiens KARP-1-binding protein 3
protein.
Length = 1460
Score = 34.3 bits (75), Expect = 0.27
Identities = 14/41 (34%), Positives = 25/41 (60%)
Frame = +2
Query: 29 DLESANGTFVNNKKIEPRRYVELLERDVVKYGFSQREYVLL 151
DL S NGTFVN+ +I + Y+ L D +++G+ + ++
Sbjct: 59 DLGSLNGTFVNDVRIPEQTYITLKLEDKLRFGYDTNLFTVV 99
>AB022658-1|BAA83379.1| 1486|Homo sapiens KARP-1-binding protein 2
(KAB2) protein.
Length = 1486
Score = 34.3 bits (75), Expect = 0.27
Identities = 14/41 (34%), Positives = 25/41 (60%)
Frame = +2
Query: 29 DLESANGTFVNNKKIEPRRYVELLERDVVKYGFSQREYVLL 151
DL S NGTFVN+ +I + Y+ L D +++G+ + ++
Sbjct: 59 DLGSLNGTFVNDVRIPEQTYITLKLEDKLRFGYDTNLFTVV 99
>AB022657-1|BAA83378.1| 1584|Homo sapiens KARP-1-binding protein 1
(KAB1) protein.
Length = 1584
Score = 34.3 bits (75), Expect = 0.27
Identities = 14/41 (34%), Positives = 25/41 (60%)
Frame = +2
Query: 29 DLESANGTFVNNKKIEPRRYVELLERDVVKYGFSQREYVLL 151
DL S NGTFVN+ +I + Y+ L D +++G+ + ++
Sbjct: 59 DLGSLNGTFVNDVRIPEQTYITLKLEDKLRFGYDTNLFTVV 99
>AB007939-1|BAA32315.2| 1472|Homo sapiens KIAA0470 protein protein.
Length = 1472
Score = 34.3 bits (75), Expect = 0.27
Identities = 14/41 (34%), Positives = 25/41 (60%)
Frame = +2
Query: 29 DLESANGTFVNNKKIEPRRYVELLERDVVKYGFSQREYVLL 151
DL S NGTFVN+ +I + Y+ L D +++G+ + ++
Sbjct: 71 DLGSLNGTFVNDVRIPEQTYITLKLEDKLRFGYDTNLFTVV 111
>BC115701-1|AAI15702.1| 828|Homo sapiens SLMAP protein protein.
Length = 828
Score = 31.9 bits (69), Expect = 1.4
Identities = 15/50 (30%), Positives = 30/50 (60%), Gaps = 4/50 (8%)
Frame = +2
Query: 2 HEGVRPYIIDLESANGTFVNNKKI----EPRRYVELLERDVVKYGFSQRE 139
H+ + Y+ D +S+NGTF+N++++ E E+L D++++G E
Sbjct: 62 HKTGKFYLQDTKSSNGTFINSQRLSRGSEESPPCEILSGDIIQFGVDVTE 111
>BC114627-1|AAI14628.1| 790|Homo sapiens SLMAP protein protein.
Length = 790
Score = 31.9 bits (69), Expect = 1.4
Identities = 15/50 (30%), Positives = 30/50 (60%), Gaps = 4/50 (8%)
Frame = +2
Query: 2 HEGVRPYIIDLESANGTFVNNKKI----EPRRYVELLERDVVKYGFSQRE 139
H+ + Y+ D +S+NGTF+N++++ E E+L D++++G E
Sbjct: 62 HKTGKFYLQDTKSSNGTFINSQRLSRGSEESPPCEILSGDIIQFGVDVTE 111
>AL391094-3|CAI23268.1| 785|Homo sapiens forkhead-associated (FHA)
phosphopeptide binding domain 1 protein.
Length = 785
Score = 31.9 bits (69), Expect = 1.4
Identities = 17/44 (38%), Positives = 26/44 (59%)
Frame = +2
Query: 29 DLESANGTFVNNKKIEPRRYVELLERDVVKYGFSQREYVLLHEN 160
D S NGTFVN I+ V+L+ D++++G + Y L+ EN
Sbjct: 72 DFNSRNGTFVNECHIQ-NVAVKLIPGDILRFGSAGLTYELVIEN 114
>AL158174-1|CAI21811.1| 785|Homo sapiens forkhead-associated (FHA)
phosphopeptide binding domain 1 protein.
Length = 785
Score = 31.9 bits (69), Expect = 1.4
Identities = 17/44 (38%), Positives = 26/44 (59%)
Frame = +2
Query: 29 DLESANGTFVNNKKIEPRRYVELLERDVVKYGFSQREYVLLHEN 160
D S NGTFVN I+ V+L+ D++++G + Y L+ EN
Sbjct: 72 DFNSRNGTFVNECHIQ-NVAVKLIPGDILRFGSAGLTYELVIEN 114
>AL031283-5|CAI21427.1| 785|Homo sapiens forkhead-associated (FHA)
phosphopeptide binding domain 1 protein.
Length = 785
Score = 31.9 bits (69), Expect = 1.4
Identities = 17/44 (38%), Positives = 26/44 (59%)
Frame = +2
Query: 29 DLESANGTFVNNKKIEPRRYVELLERDVVKYGFSQREYVLLHEN 160
D S NGTFVN I+ V+L+ D++++G + Y L+ EN
Sbjct: 72 DFNSRNGTFVNECHIQ-NVAVKLIPGDILRFGSAGLTYELVIEN 114
>AK124200-1|BAC85803.1| 506|Homo sapiens protein ( Homo sapiens
cDNA FLJ42206 fis, clone THYMU2035735, highly similar
to Oryctolagus cuniculus sarcolemmal associated
protein-3 mRNA. ).
Length = 506
Score = 31.9 bits (69), Expect = 1.4
Identities = 15/50 (30%), Positives = 30/50 (60%), Gaps = 4/50 (8%)
Frame = +2
Query: 2 HEGVRPYIIDLESANGTFVNNKKI----EPRRYVELLERDVVKYGFSQRE 139
H+ + Y+ D +S+NGTF+N++++ E E+L D++++G E
Sbjct: 62 HKTGKFYLQDTKSSNGTFINSQRLSRGSEESPPCEILSGDIIQFGVDVTE 111
>M22734-1|AAA60048.1| 1089|Homo sapiens platelet-derived growth
factor A receptor protein.
Length = 1089
Score = 31.5 bits (68), Expect = 1.9
Identities = 17/45 (37%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = +2
Query: 5 EGVRPYIIDLESANGTFVNNKKIEPRRYVELLER-DVVKYGFSQR 136
E R Y+I NG +++ K+ + +YV +LER +V KY QR
Sbjct: 715 ESTRSYVILSFENNGDYMDMKQADTTQYVPMLERKEVSKYSDIQR 759
>M21574-1|AAA96715.1| 1089|Homo sapiens platelet-derived growth
factor receptor A chain protein.
Length = 1089
Score = 31.5 bits (68), Expect = 1.9
Identities = 17/45 (37%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = +2
Query: 5 EGVRPYIIDLESANGTFVNNKKIEPRRYVELLER-DVVKYGFSQR 136
E R Y+I NG +++ K+ + +YV +LER +V KY QR
Sbjct: 715 ESTRSYVILSFENNGDYMDMKQADTTQYVPMLERKEVSKYSDIQR 759
>D50017-1|BAA08742.1| 1089|Homo sapiens alpha-platelet-derived
growth factor receptor protein.
Length = 1089
Score = 31.5 bits (68), Expect = 1.9
Identities = 17/45 (37%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = +2
Query: 5 EGVRPYIIDLESANGTFVNNKKIEPRRYVELLER-DVVKYGFSQR 136
E R Y+I NG +++ K+ + +YV +LER +V KY QR
Sbjct: 715 ESTRSYVILSFENNGDYMDMKQADTTQYVPMLERKEVSKYSDIQR 759
>AY229892-1|AAP69563.1| 849|Homo sapiens FIP1L1/PDGFRA fusion
protein protein.
Length = 849
Score = 31.5 bits (68), Expect = 1.9
Identities = 17/45 (37%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = +2
Query: 5 EGVRPYIIDLESANGTFVNNKKIEPRRYVELLER-DVVKYGFSQR 136
E R Y+I NG +++ K+ + +YV +LER +V KY QR
Sbjct: 475 ESTRSYVILSFENNGDYMDMKQADTTQYVPMLERKEVSKYSDIQR 519
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 68,644,800
Number of Sequences: 237096
Number of extensions: 1259101
Number of successful extensions: 1738
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 1713
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1738
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 5046825278
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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