Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0004_I19
         (500 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    25   0.38 
AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory recept...    25   0.38 
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    22   2.7  
U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           21   8.2  

>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 25.0 bits (52), Expect = 0.38
 Identities = 10/25 (40%), Positives = 16/25 (64%)
 Frame = -1

Query: 410 PKKFHFILLQLTILFSNTRKIIATL 336
           P+ FH I L L  + +NT +I+ T+
Sbjct: 273 PQNFHDIFLPLLCILTNTLEILITV 297


>AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory receptor
           candidate 25 protein.
          Length = 314

 Score = 25.0 bits (52), Expect = 0.38
 Identities = 10/25 (40%), Positives = 16/25 (64%)
 Frame = -1

Query: 410 PKKFHFILLQLTILFSNTRKIIATL 336
           P+ FH I L L  + +NT +I+ T+
Sbjct: 98  PQNFHDIFLPLLCILTNTLEILITV 122


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 22.2 bits (45), Expect = 2.7
 Identities = 8/28 (28%), Positives = 15/28 (53%)
 Frame = +1

Query: 208 YYMLCNCKNNNISL*YIYCNGWHRVTMV 291
           YY  C     N+ L ++ C+G+  V ++
Sbjct: 57  YYFYCVSITFNVHLLFLLCSGYFTVHLL 84


>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 20.6 bits (41), Expect = 8.2
 Identities = 10/28 (35%), Positives = 15/28 (53%)
 Frame = -1

Query: 317 RGTPTSHYSTIVTLCHPLQYIYYNEILL 234
           RGT  SH++  V + + L      E+LL
Sbjct: 239 RGTMLSHFAYYVDMANMLTTPLSEEVLL 266


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 97,329
Number of Sequences: 336
Number of extensions: 1790
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11839801
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)