Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0004_I19
         (500 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF493864-1|ABP65286.1|  247|Apis mellifera triosephoshpate isome...    26   0.19 
AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    23   2.4  
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    22   4.1  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    21   7.2  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    21   7.2  

>EF493864-1|ABP65286.1|  247|Apis mellifera triosephoshpate
           isomerase protein.
          Length = 247

 Score = 26.2 bits (55), Expect = 0.19
 Identities = 13/41 (31%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
 Frame = +3

Query: 18  MNGTFETSNNVVGFIKCVPLTVSLSLY*NI-SLFFVNVTNL 137
           MNGT    N++VGF+K  PL  ++ +   + S++     N+
Sbjct: 13  MNGTKSEINDIVGFLKKGPLDSNVEVVVGVPSIYLTYAKNI 53


>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 22.6 bits (46), Expect = 2.4
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -3

Query: 342 NTSRGPQPPRHTDQPLQHHS 283
           ++SR P P   T QP Q H+
Sbjct: 39  SSSRSPSPSLLTSQPHQDHN 58


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 21.8 bits (44), Expect = 4.1
 Identities = 12/30 (40%), Positives = 16/30 (53%)
 Frame = +3

Query: 30  FETSNNVVGFIKCVPLTVSLSLY*NISLFF 119
           F T NNV   I  + +T+SLS    I+  F
Sbjct: 869 FGTGNNVALRITSMSVTISLSASVTIACLF 898


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 9/27 (33%), Positives = 11/27 (40%)
 Frame = +2

Query: 245 HCNIYIVMDGIG*LWCCSGWSVCRGGC 325
           HC   I     G ++ C GW    G C
Sbjct: 595 HCAEEIGRGQYGIVFACDGWGGKAGPC 621


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 9/27 (33%), Positives = 11/27 (40%)
 Frame = +2

Query: 245 HCNIYIVMDGIG*LWCCSGWSVCRGGC 325
           HC   I     G ++ C GW    G C
Sbjct: 633 HCAEEIGRGQYGIVFACDGWGGKAGPC 659


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 117,023
Number of Sequences: 438
Number of extensions: 2166
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 13741392
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)