Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0004_I18
(583 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z75530-3|CAA99793.1| 702|Caenorhabditis elegans Hypothetical pr... 262 2e-70
Z68751-3|CAA92973.1| 760|Caenorhabditis elegans Hypothetical pr... 178 2e-45
U00036-14|ABC71802.1| 672|Caenorhabditis elegans Hypothetical p... 123 1e-28
U00036-13|ABC71803.1| 479|Caenorhabditis elegans Hypothetical p... 123 1e-28
AF143150-1|AAD37916.1| 222|Caenorhabditis elegans heat shock pr... 123 1e-28
Z68227-2|CAA92509.1| 322|Caenorhabditis elegans Hypothetical pr... 33 0.15
AC024821-5|AAF60784.1| 337|Caenorhabditis elegans Hypothetical ... 28 4.2
AL032626-28|CAO82072.1| 337|Caenorhabditis elegans Hypothetical... 28 5.6
AL032626-8|CAA21528.1| 335|Caenorhabditis elegans Hypothetical ... 28 5.6
U00053-1|AAZ94293.1| 548|Caenorhabditis elegans Acetylcholine r... 27 7.4
Z83116-11|CAM84819.1| 278|Caenorhabditis elegans Hypothetical p... 27 9.7
>Z75530-3|CAA99793.1| 702|Caenorhabditis elegans Hypothetical
protein C47E8.5 protein.
Length = 702
Score = 262 bits (641), Expect = 2e-70
Identities = 126/152 (82%), Positives = 139/152 (91%)
Frame = +3
Query: 126 SGEVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRYESLTDPSKLDSG 305
S ETFAFQAEIAQLMSLIINTFYSNKEI+LRELISN+SDALDKIRY++LT+PS+LD+G
Sbjct: 2 SENAETFAFQAEIAQLMSLIINTFYSNKEIYLRELISNASDALDKIRYQALTEPSELDTG 61
Query: 306 KELYIKIIPNKNEGTLTIIDTGIGMTKADLVNNLGTIAKSGTNAFMEALHAGADISMIGQ 485
KEL+IKI PNK E TLTI+DTGIGMTKADLVNNLGTIAKSGT AFMEAL AGADISMIGQ
Sbjct: 62 KELFIKITPNKEEKTLTIMDTGIGMTKADLVNNLGTIAKSGTKAFMEALQAGADISMIGQ 121
Query: 486 FGVGFYSCYLVADRVTVHSKHNDDEQYMWESS 581
FGVGFYS +LVAD+V V SK+NDD+ Y WESS
Sbjct: 122 FGVGFYSAFLVADKVVVTSKNNDDDSYQWESS 153
>Z68751-3|CAA92973.1| 760|Caenorhabditis elegans Hypothetical
protein T05E11.3 protein.
Length = 760
Score = 178 bits (434), Expect = 2e-45
Identities = 89/154 (57%), Positives = 114/154 (74%), Gaps = 5/154 (3%)
Frame = +3
Query: 132 EVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRYESLTDPSKLDSGKE 311
+ E FQAE+ ++M LIIN+ Y NKEIFLRELISN+SDALDKIR SLTDP +L +E
Sbjct: 60 KAEKHEFQAEVNRMMKLIINSLYRNKEIFLRELISNASDALDKIRLLSLTDPEQLRETEE 119
Query: 312 LYIKIIPNKNEGTLTIIDTGIGMTKADLVNNLGTIAKSGTNAFMEALHAGADIS-----M 476
+ +KI ++ L I DTG+GMT+ DL+NNLGTIA+SGT+ F+ L A S +
Sbjct: 120 MSVKIKADRENRLLHITDTGVGMTRQDLINNLGTIARSGTSEFLSKLMDTATSSDQQQDL 179
Query: 477 IGQFGVGFYSCYLVADRVTVHSKHNDDEQYMWES 578
IGQFGVGFY+ +LVADRV V +K+NDD+QY+WES
Sbjct: 180 IGQFGVGFYAAFLVADRVVVTTKNNDDDQYIWES 213
>U00036-14|ABC71802.1| 672|Caenorhabditis elegans Hypothetical
protein R151.7a protein.
Length = 672
Score = 123 bits (296), Expect = 1e-28
Identities = 67/140 (47%), Positives = 92/140 (65%)
Frame = +3
Query: 126 SGEVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRYESLTDPSKLDSG 305
+ E + FQAE LM ++ + YS+ E+F+RELISN+SDAL+K RY L + G
Sbjct: 39 ASEPQRHEFQAETRNLMDIVAKSLYSHSEVFVRELISNASDALEKRRYAEL--KGDVAEG 96
Query: 306 KELYIKIIPNKNEGTLTIIDTGIGMTKADLVNNLGTIAKSGTNAFMEALHAGADISMIGQ 485
I+I NK++ T+T DTGIGM + DLV LGTIAKSG+ F+E A+ ++IGQ
Sbjct: 97 PS-EIRITTNKDKRTITFEDTGIGMNREDLVKFLGTIAKSGSKDFIENNKENAE-AVIGQ 154
Query: 486 FGVGFYSCYLVADRVTVHSK 545
FGVGFYS ++VAD V V ++
Sbjct: 155 FGVGFYSAFMVADSVVVTTR 174
>U00036-13|ABC71803.1| 479|Caenorhabditis elegans Hypothetical
protein R151.7b protein.
Length = 479
Score = 123 bits (296), Expect = 1e-28
Identities = 67/140 (47%), Positives = 92/140 (65%)
Frame = +3
Query: 126 SGEVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRYESLTDPSKLDSG 305
+ E + FQAE LM ++ + YS+ E+F+RELISN+SDAL+K RY L + G
Sbjct: 39 ASEPQRHEFQAETRNLMDIVAKSLYSHSEVFVRELISNASDALEKRRYAEL--KGDVAEG 96
Query: 306 KELYIKIIPNKNEGTLTIIDTGIGMTKADLVNNLGTIAKSGTNAFMEALHAGADISMIGQ 485
I+I NK++ T+T DTGIGM + DLV LGTIAKSG+ F+E A+ ++IGQ
Sbjct: 97 PS-EIRITTNKDKRTITFEDTGIGMNREDLVKFLGTIAKSGSKDFIENNKENAE-AVIGQ 154
Query: 486 FGVGFYSCYLVADRVTVHSK 545
FGVGFYS ++VAD V V ++
Sbjct: 155 FGVGFYSAFMVADSVVVTTR 174
>AF143150-1|AAD37916.1| 222|Caenorhabditis elegans heat shock
protein 75 protein.
Length = 222
Score = 123 bits (296), Expect = 1e-28
Identities = 67/140 (47%), Positives = 92/140 (65%)
Frame = +3
Query: 126 SGEVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRYESLTDPSKLDSG 305
+ E + FQAE LM ++ + YS+ E+F+RELISN+SDAL+K RY L + G
Sbjct: 39 ASEPQRHEFQAETRNLMDIVAKSLYSHSEVFVRELISNASDALEKRRYAEL--KGDVAEG 96
Query: 306 KELYIKIIPNKNEGTLTIIDTGIGMTKADLVNNLGTIAKSGTNAFMEALHAGADISMIGQ 485
I+I NK++ T+T DTGIGM + DLV LGTIAKSG+ F+E A+ ++IGQ
Sbjct: 97 PS-EIRITTNKDKRTITFEDTGIGMNREDLVKFLGTIAKSGSKDFIENNKENAE-AVIGQ 154
Query: 486 FGVGFYSCYLVADRVTVHSK 545
FGVGFYS ++VAD V V ++
Sbjct: 155 FGVGFYSAFMVADSVVVTTR 174
>Z68227-2|CAA92509.1| 322|Caenorhabditis elegans Hypothetical
protein F49C12.4 protein.
Length = 322
Score = 33.1 bits (72), Expect = 0.15
Identities = 19/64 (29%), Positives = 35/64 (54%)
Frame = +3
Query: 186 INTFYSNKEIFLRELISNSSDALDKIRYESLTDPSKLDSGKELYIKIIPNKNEGTLTIID 365
+N + N ++F ++ +S+ + YESLT + + +I I+PNK E +T++
Sbjct: 75 LNPYRGNHDLFWSAFVNKTSECDNLKEYESLTIRPVANKDEVKFI-ILPNK-ETNITMVT 132
Query: 366 TGIG 377
GIG
Sbjct: 133 LGIG 136
>AC024821-5|AAF60784.1| 337|Caenorhabditis elegans Hypothetical
protein Y55B1AR.4 protein.
Length = 337
Score = 28.3 bits (60), Expect = 4.2
Identities = 14/27 (51%), Positives = 19/27 (70%)
Frame = +3
Query: 96 KMPEGMETTQSGEVETFAFQAEIAQLM 176
K G ETTQ+G + FAF AE+A+L+
Sbjct: 147 KSNSGRETTQTGCISDFAF-AEVARLL 172
>AL032626-28|CAO82072.1| 337|Caenorhabditis elegans Hypothetical
protein Y37D8A.9b protein.
Length = 337
Score = 27.9 bits (59), Expect = 5.6
Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 1/67 (1%)
Frame = +3
Query: 219 LRELISNSSDALDKIRYESLTDPSKLDSGKELYIKIIPNKNEGTLTIIDTGIGMTKADL- 395
LR+++ + D + + + +D E YIK IP NE T+ D I +AD+
Sbjct: 134 LRKILIDDYDLVCRYFINIVPHEYSVDQIIEDYIKTIPVSNEQMRTVDDLLIEYEEADIK 193
Query: 396 VNNLGTI 416
+ NL I
Sbjct: 194 ITNLALI 200
>AL032626-8|CAA21528.1| 335|Caenorhabditis elegans Hypothetical
protein Y37D8A.9a protein.
Length = 335
Score = 27.9 bits (59), Expect = 5.6
Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 1/67 (1%)
Frame = +3
Query: 219 LRELISNSSDALDKIRYESLTDPSKLDSGKELYIKIIPNKNEGTLTIIDTGIGMTKADL- 395
LR+++ + D + + + +D E YIK IP NE T+ D I +AD+
Sbjct: 134 LRKILIDDYDLVCRYFINIVPHEYSVDQIIEDYIKTIPVSNEQMRTVDDLLIEYEEADIK 193
Query: 396 VNNLGTI 416
+ NL I
Sbjct: 194 ITNLALI 200
>U00053-1|AAZ94293.1| 548|Caenorhabditis elegans Acetylcholine
receptor protein 5 protein.
Length = 548
Score = 27.5 bits (58), Expect = 7.4
Identities = 18/63 (28%), Positives = 29/63 (46%)
Frame = -3
Query: 524 VCDQIARVETHAELTDHTYVGTCMQGLHESIGARFCNGTQVIN*IGFSHADTGVNDRKRA 345
VC+Q+ T+ L Y+G M + +G G I+ G H + ++DR R
Sbjct: 374 VCNQMPSTSTYVPLMSWYYIGIIMVIV---VGTFLATGVLAIH--GQKHYNKPISDRIRK 428
Query: 344 LIF 336
LI+
Sbjct: 429 LIY 431
>Z83116-11|CAM84819.1| 278|Caenorhabditis elegans Hypothetical
protein M01B2.12 protein.
Length = 278
Score = 27.1 bits (57), Expect = 9.7
Identities = 16/57 (28%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Frame = +3
Query: 177 SLIINTFYSNKEI-FLRELISNSSDALDKIRYESLTDPSKLDSGKELYIKIIPNKNE 344
+L FY NKEI ++ ++ + D+ ++L KLD+ L+I+ +PN ++
Sbjct: 169 NLYFADFYCNKEIHYVTVVVCITGTHADRYCRKNLI---KLDTSTNLFIRSVPNNHQ 222
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,285,502
Number of Sequences: 27780
Number of extensions: 272160
Number of successful extensions: 708
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 686
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 701
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1215936170
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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