Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0004_I16
         (550 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     22   3.1  
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    21   5.4  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    21   7.1  

>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 22.2 bits (45), Expect = 3.1
 Identities = 12/34 (35%), Positives = 17/34 (50%), Gaps = 2/34 (5%)
 Frame = -3

Query: 173 KSFHLKFHVVDSRLIANIT--FHFSKANLQVFPL 78
           K  H  FH V +  + N+T   ++    LQ FPL
Sbjct: 444 KDPHYGFHNVTNTTLQNLTPQLNYISMKLQSFPL 477


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 21.4 bits (43), Expect = 5.4
 Identities = 15/40 (37%), Positives = 19/40 (47%), Gaps = 1/40 (2%)
 Frame = -3

Query: 293 YFRCGNAKA*EFAIILNIPFHQR*IIKLW-QFLLRRKEKK 177
           Y+RC + K  EFA      FH +  I  W +   R K KK
Sbjct: 491 YYRCVHGKPTEFACRPGTVFHTQSNICDWPEHADREKCKK 530



 Score = 21.0 bits (42), Expect = 7.1
 Identities = 9/33 (27%), Positives = 16/33 (48%)
 Frame = +3

Query: 213 FYYLSLMERNVKYDGKFLSFCVATPKISFKQQK 311
           FY++  + R    +GK     +A P   F+ Q+
Sbjct: 163 FYFVGELRRAFDKEGKNWEITMAVPIAKFRLQE 195


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 21.0 bits (42), Expect = 7.1
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = +3

Query: 219 YLSLMERNVKYDGKFLSF 272
           Y + +E+N  +DG+  SF
Sbjct: 58  YFASLEKNPLFDGQLYSF 75


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 110,966
Number of Sequences: 336
Number of extensions: 2064
Number of successful extensions: 4
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13516233
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)