Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0004_I12
         (557 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M81830-1|AAA58248.1|  369|Homo sapiens somatostatin receptor iso...    30   6.3  
BT019926-1|AAV38729.1|  369|Homo sapiens somatostatin receptor 2...    30   6.3  
BC095495-1|AAH95495.1|  369|Homo sapiens somatostatin receptor 2...    30   6.3  
BC019610-1|AAH19610.1|  369|Homo sapiens somatostatin receptor 2...    30   6.3  
BC009522-1|AAH09522.1|  346|Homo sapiens Unknown (protein for IM...    30   6.3  
BC000256-1|AAH00256.1|  272|Homo sapiens Similar to somatostatin...    30   6.3  
AY236542-1|AAO92064.1|  369|Homo sapiens somatostatin receptor 2...    30   6.3  
AF184174-2|AAF42809.1|  369|Homo sapiens somatostatin receptor 2...    30   6.3  
AF184174-1|AAF42810.1|  356|Homo sapiens somatostatin receptor 2...    30   6.3  
AB065911-1|BAC06126.1|  369|Homo sapiens seven transmembrane hel...    30   6.3  

>M81830-1|AAA58248.1|  369|Homo sapiens somatostatin receptor
           isoform 2 protein.
          Length = 369

 Score = 29.9 bits (64), Expect = 6.3
 Identities = 11/31 (35%), Positives = 18/31 (58%)
 Frame = +3

Query: 294 YYLFEISFIFLTSLPTPIYK*GIDFIIFLRY 386
           +Y+F +S + +   PTP  K   DF++ L Y
Sbjct: 272 FYIFNVSSVSMAISPTPALKGMFDFVVVLTY 302


>BT019926-1|AAV38729.1|  369|Homo sapiens somatostatin receptor 2
           protein.
          Length = 369

 Score = 29.9 bits (64), Expect = 6.3
 Identities = 11/31 (35%), Positives = 18/31 (58%)
 Frame = +3

Query: 294 YYLFEISFIFLTSLPTPIYK*GIDFIIFLRY 386
           +Y+F +S + +   PTP  K   DF++ L Y
Sbjct: 272 FYIFNVSSVSMAISPTPALKGMFDFVVVLTY 302


>BC095495-1|AAH95495.1|  369|Homo sapiens somatostatin receptor 2
           protein.
          Length = 369

 Score = 29.9 bits (64), Expect = 6.3
 Identities = 11/31 (35%), Positives = 18/31 (58%)
 Frame = +3

Query: 294 YYLFEISFIFLTSLPTPIYK*GIDFIIFLRY 386
           +Y+F +S + +   PTP  K   DF++ L Y
Sbjct: 272 FYIFNVSSVSMAISPTPALKGMFDFVVVLTY 302


>BC019610-1|AAH19610.1|  369|Homo sapiens somatostatin receptor 2
           protein.
          Length = 369

 Score = 29.9 bits (64), Expect = 6.3
 Identities = 11/31 (35%), Positives = 18/31 (58%)
 Frame = +3

Query: 294 YYLFEISFIFLTSLPTPIYK*GIDFIIFLRY 386
           +Y+F +S + +   PTP  K   DF++ L Y
Sbjct: 272 FYIFNVSSVSMAISPTPALKGMFDFVVVLTY 302


>BC009522-1|AAH09522.1|  346|Homo sapiens Unknown (protein for
           IMAGE:3354783) protein.
          Length = 346

 Score = 29.9 bits (64), Expect = 6.3
 Identities = 11/31 (35%), Positives = 18/31 (58%)
 Frame = +3

Query: 294 YYLFEISFIFLTSLPTPIYK*GIDFIIFLRY 386
           +Y+F +S + +   PTP  K   DF++ L Y
Sbjct: 249 FYIFNVSSVSMAISPTPALKGMFDFVVVLTY 279


>BC000256-1|AAH00256.1|  272|Homo sapiens Similar to somatostatin
           receptor 2 protein.
          Length = 272

 Score = 29.9 bits (64), Expect = 6.3
 Identities = 11/31 (35%), Positives = 18/31 (58%)
 Frame = +3

Query: 294 YYLFEISFIFLTSLPTPIYK*GIDFIIFLRY 386
           +Y+F +S + +   PTP  K   DF++ L Y
Sbjct: 175 FYIFNVSSVSMAISPTPALKGMFDFVVVLTY 205


>AY236542-1|AAO92064.1|  369|Homo sapiens somatostatin receptor 2
           protein.
          Length = 369

 Score = 29.9 bits (64), Expect = 6.3
 Identities = 11/31 (35%), Positives = 18/31 (58%)
 Frame = +3

Query: 294 YYLFEISFIFLTSLPTPIYK*GIDFIIFLRY 386
           +Y+F +S + +   PTP  K   DF++ L Y
Sbjct: 272 FYIFNVSSVSMAISPTPALKGMFDFVVVLTY 302


>AF184174-2|AAF42809.1|  369|Homo sapiens somatostatin receptor 2A
           protein.
          Length = 369

 Score = 29.9 bits (64), Expect = 6.3
 Identities = 11/31 (35%), Positives = 18/31 (58%)
 Frame = +3

Query: 294 YYLFEISFIFLTSLPTPIYK*GIDFIIFLRY 386
           +Y+F +S + +   PTP  K   DF++ L Y
Sbjct: 272 FYIFNVSSVSMAISPTPALKGMFDFVVVLTY 302


>AF184174-1|AAF42810.1|  356|Homo sapiens somatostatin receptor 2B
           protein.
          Length = 356

 Score = 29.9 bits (64), Expect = 6.3
 Identities = 11/31 (35%), Positives = 18/31 (58%)
 Frame = +3

Query: 294 YYLFEISFIFLTSLPTPIYK*GIDFIIFLRY 386
           +Y+F +S + +   PTP  K   DF++ L Y
Sbjct: 272 FYIFNVSSVSMAISPTPALKGMFDFVVVLTY 302


>AB065911-1|BAC06126.1|  369|Homo sapiens seven transmembrane helix
           receptor protein.
          Length = 369

 Score = 29.9 bits (64), Expect = 6.3
 Identities = 11/31 (35%), Positives = 18/31 (58%)
 Frame = +3

Query: 294 YYLFEISFIFLTSLPTPIYK*GIDFIIFLRY 386
           +Y+F +S + +   PTP  K   DF++ L Y
Sbjct: 272 FYIFNVSSVSMAISPTPALKGMFDFVVVLTY 302


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 74,622,661
Number of Sequences: 237096
Number of extensions: 1423408
Number of successful extensions: 1600
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1584
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1600
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5590411794
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)