Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0004_I11
(598 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_UPI0000DB7305 Cluster: PREDICTED: similar to Nuclear po... 99 9e-20
UniRef50_A7RI66 Cluster: Predicted protein; n=1; Nematostella ve... 73 7e-12
UniRef50_UPI0000E4782F Cluster: PREDICTED: similar to nuclear po... 64 2e-09
UniRef50_Q12769 Cluster: Nuclear pore complex protein Nup160; n=... 62 1e-08
UniRef50_UPI0000D5716C Cluster: PREDICTED: similar to Nuclear po... 56 8e-07
UniRef50_Q17II0 Cluster: Putative uncharacterized protein; n=2; ... 53 6e-06
UniRef50_Q9VKJ3 Cluster: Nuclear pore complex protein Nup160 hom... 51 2e-05
UniRef50_Q4S160 Cluster: Chromosome 13 SCAF14769, whole genome s... 45 0.002
UniRef50_Q0TZE8 Cluster: Putative uncharacterized protein; n=1; ... 37 0.31
UniRef50_Q55DW5 Cluster: Putative uncharacterized protein; n=1; ... 36 0.72
UniRef50_Q2HAG2 Cluster: Putative uncharacterized protein; n=1; ... 36 0.72
UniRef50_A7QFQ9 Cluster: Chromosome undetermined scaffold_89, wh... 35 1.3
UniRef50_A5BRV5 Cluster: Putative uncharacterized protein; n=2; ... 35 1.3
UniRef50_A6RWG8 Cluster: Putative uncharacterized protein; n=1; ... 35 1.7
UniRef50_Q96YL0 Cluster: Putative pterin-4-alpha-carbinolamine d... 35 1.7
UniRef50_A3LMW2 Cluster: Predicted protein; n=1; Pichia stipitis... 32 8.9
>UniRef50_UPI0000DB7305 Cluster: PREDICTED: similar to Nuclear pore
complex protein Nup160 homolog; n=1; Apis mellifera|Rep:
PREDICTED: similar to Nuclear pore complex protein Nup160
homolog - Apis mellifera
Length = 1348
Score = 98.7 bits (235), Expect = 9e-20
Identities = 61/172 (35%), Positives = 83/172 (48%), Gaps = 1/172 (0%)
Frame = +1
Query: 10 FLRKLVTGSDCLTHHQALVLYYMKVIKLFEIHDAGACVVRLAETAISIADKEDPNLATCQ 189
FL + S L+ + +L+ YY+KVI+LFE H+A C++ LAETAI IADK+DPNL T
Sbjct: 867 FLADALLESSVLSENSSLIQYYLKVIRLFEEHNAFDCIIELAETAILIADKDDPNLPTLH 926
Query: 190 WLVFKWHLSGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSERGELGALVRCP-XXXXXX 366
+VF HL+ G ER +L L+ P
Sbjct: 927 SIVFVQHLNLGHHTKAYNCLNSNPDAARRVDCLRQLVVTLFERKKLIDLISFPYVDMYED 986
Query: 367 XXXXXXXXXXXXXXXXNPYYDFLYSLHISRHHYRKAAAVMYERATRCRVEEK 522
N YY+FLYS HI++ + RKAA+VMYE+A R E +
Sbjct: 987 LERIVEGRARSVDLMENNYYNFLYSFHINKGNMRKAASVMYEQAMRLSQESQ 1038
>UniRef50_A7RI66 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 571
Score = 72.5 bits (170), Expect = 7e-12
Identities = 58/197 (29%), Positives = 84/197 (42%), Gaps = 1/197 (0%)
Frame = +1
Query: 7 GFLRKLVTGSDCLTHHQALVLYYMKVIKLFEIHDAGACVVRLAETAISIADKEDPNLATC 186
G +RKL+ SD +VLYY+KV++LFE + V+ +A TA+SIA+ +DPN+
Sbjct: 53 GSIRKLLQ-SDSQDPASLVVLYYVKVMRLFEQFEVLDMVISVANTALSIANSKDPNVPNL 111
Query: 187 QWLVFKWHLSGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSERGELGALVRCP-XXXXX 363
+FK HL G ERG+L L P
Sbjct: 112 WSNIFKHHLELGHNDEAYAALTSNPDPSRWVDCLHRFMVVLCERGQLQELCEYPYVNLKD 171
Query: 364 XXXXXXXXXXXXXXXXXNPYYDFLYSLHISRHHYRKAAAVMYERATRCRVEEKIEGENAT 543
+ +YD LY+ H+ R YRKA VMYE R+ ++ G++
Sbjct: 172 QFVGIMESHARTVDITTHQFYDLLYAFHMFRGDYRKAGNVMYEYGG--RLGRELPGKSGL 229
Query: 544 GAGRMKWLAAAITCLRL 594
+ K AA+ LRL
Sbjct: 230 -QKQAKCYLAAMNALRL 245
>UniRef50_UPI0000E4782F Cluster: PREDICTED: similar to nuclear pore
protein, partial; n=1; Strongylocentrotus purpuratus|Rep:
PREDICTED: similar to nuclear pore protein, partial -
Strongylocentrotus purpuratus
Length = 1166
Score = 64.5 bits (150), Expect = 2e-09
Identities = 50/177 (28%), Positives = 77/177 (43%), Gaps = 1/177 (0%)
Frame = +1
Query: 67 LYYMKVIKLFEIHDAGACVVRLAETAISIADKEDPNLATCQWLVFKWHLSGGXXXXXXXX 246
LY++KVI L E + V+ LA+TA+S AD +DPNL T +FK+HL
Sbjct: 628 LYHLKVIGLLEQFELRELVISLAKTALSAADIDDPNLPTLWVKIFKYHLELCHNDEAYSA 687
Query: 247 XXXXXXXXXXXXXXXXXXXXXSERGELGALVRCPXXXXXXXXXXXXXXXXXXXXXXN-PY 423
E+ ++ L + P Y
Sbjct: 688 MTSNPDPERRRDCLRQFVVVLCEQKQMKQLCQYPYIDLHDEIVSIIESRARSVDLLTINY 747
Query: 424 YDFLYSLHISRHHYRKAAAVMYERATRCRVEEKIEGENATGAGRMKWLAAAITCLRL 594
YD L++ H R +YR+A +VMYE+AT R+ +++ G ++ +L AA+ LRL
Sbjct: 748 YDLLFAFHTIRGNYRQAGSVMYEQAT--RLAQEVIGADSLNRQACCYL-AAMNSLRL 801
>UniRef50_Q12769 Cluster: Nuclear pore complex protein Nup160; n=32;
Euteleostomi|Rep: Nuclear pore complex protein Nup160 -
Homo sapiens (Human)
Length = 1316
Score = 62.1 bits (144), Expect = 1e-08
Identities = 53/197 (26%), Positives = 76/197 (38%), Gaps = 2/197 (1%)
Frame = +1
Query: 10 FLRKLVTGSDCLTHHQALVLYYMKVIKLFEIHDAGACVVRLAETAISIADKEDPNLATCQ 189
FL +L+ D + YY KV++L ++ V++LA +AI+ A + + AT +
Sbjct: 908 FLDRLIRSEDGEIVSTPRLQYYDKVLRLLDVIGLPELVIQLATSAITEASDDWKSQATLR 967
Query: 190 WLVFKWHLSGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSERGELGALVRCP-XXXXXX 366
+FK HL G ER +L LV P
Sbjct: 968 TCIFKHHLDLGHNSQAYEALTQIPDSSRQLDCLRQLVVVLCERSQLQDLVEFPYVNLHNE 1027
Query: 367 XXXXXXXXXXXXXXXXNPYYDFLYSLHISRHHYRKAAAVMYERATRC-RVEEKIEGENAT 543
+ YY+ LY+ HI RH+YRKA VM+E R R + G
Sbjct: 1028 VVGIIESRARAVDLMTHNYYELLYAFHIYRHNYRKAGTVMFEYGMRLGREVRTLRGLEKQ 1087
Query: 544 GAGRMKWLAAAITCLRL 594
G AA+ CLRL
Sbjct: 1088 G----NCYLAALNCLRL 1100
>UniRef50_UPI0000D5716C Cluster: PREDICTED: similar to Nuclear pore
complex protein Nup160 homolog; n=2; Coelomata|Rep:
PREDICTED: similar to Nuclear pore complex protein Nup160
homolog - Tribolium castaneum
Length = 1388
Score = 55.6 bits (128), Expect = 8e-07
Identities = 43/153 (28%), Positives = 60/153 (39%), Gaps = 3/153 (1%)
Frame = +1
Query: 55 QALVLYYMKVIKLFEIHDAGACVVRLAETAISIADKEDPNLATCQWLVFKWHLSGGXXXX 234
+A + YY+KVI LFE+H + C + LA A+S+ +DP AT + FK HL+
Sbjct: 906 KAYINYYLKVIHLFELHKSYDCAIALANKALSVTSPDDPLTATLYSIKFKHHLALKNYQS 965
Query: 235 XXXXXXXXXXXXXXXXXXXXXXXXXSERGELGALVRCPXXXXXXXXXXXXXXXXXXXXXX 414
+ +L L+
Sbjct: 966 AYDSLNANPDSDRRKDNLRDLVKKLLDEKKLDVLMGFTYSGMEELFCDIVSTRARAADPS 1025
Query: 415 NP-YYDFLYSLHISR--HHYRKAAAVMYERATR 504
N YYDFLY+ I R R AA+VMYE+A R
Sbjct: 1026 NNIYYDFLYAYQIKRGTTFLRAAASVMYEQAFR 1058
>UniRef50_Q17II0 Cluster: Putative uncharacterized protein; n=2; Aedes
aegypti|Rep: Putative uncharacterized protein - Aedes
aegypti (Yellowfever mosquito)
Length = 1321
Score = 52.8 bits (121), Expect = 6e-06
Identities = 41/155 (26%), Positives = 60/155 (38%), Gaps = 1/155 (0%)
Frame = +1
Query: 55 QALVLYYMKVIKLFEIHDAGACVVRLAETAISIADKEDPNLATCQWLVFKWHLSGGXXXX 234
+ L ++Y+KVI+LFE + A C+ LA+ AI + A Q + F H+ G
Sbjct: 887 EMLSIFYLKVIRLFEHYGAYDCINVLAQIAIGTS-VHSKQQAMFQSIDFSSHMELGHYEE 945
Query: 235 XXXXXXXXXXXXXXXXXXXXXXXXXSERGELGALVRCPXXXXXXXXXXXXXXXXXXXXXX 414
+ + LV P
Sbjct: 946 AYHSLVYNCEITRKKDCLRQLVWRLFQAKKFNVLVDLPYYGLEADFQNIMEMHARSVEIS 1005
Query: 415 -NPYYDFLYSLHISRHHYRKAAAVMYERATRCRVE 516
N +YDFLYS HI + + RKAA + YE+A RC +E
Sbjct: 1006 ENSHYDFLYSYHILQGNMRKAALIAYEKAMRCHLE 1040
>UniRef50_Q9VKJ3 Cluster: Nuclear pore complex protein Nup160 homolog;
n=3; Sophophora|Rep: Nuclear pore complex protein Nup160
homolog - Drosophila melanogaster (Fruit fly)
Length = 1411
Score = 50.8 bits (116), Expect = 2e-05
Identities = 25/55 (45%), Positives = 35/55 (63%)
Frame = +1
Query: 58 ALVLYYMKVIKLFEIHDAGACVVRLAETAISIADKEDPNLATCQWLVFKWHLSGG 222
A+V YY+KVI+LFE H A +++LA+ AI + +DP L Q +VF HL G
Sbjct: 927 AIVHYYLKVIQLFEQHSALDYIIQLADMAIRVLQPDDPQLPMFQSIVFNNHLQLG 981
Score = 41.5 bits (93), Expect = 0.015
Identities = 23/60 (38%), Positives = 34/60 (56%)
Frame = +1
Query: 415 NPYYDFLYSLHISRHHYRKAAAVMYERATRCRVEEKIEGENATGAGRMKWLAAAITCLRL 594
N Y+FLY+ H ++ + RKA+ VMYE+A R +V+ + NA R L + CL L
Sbjct: 1047 NEVYNFLYAFHTNKGNMRKASTVMYEQAMRFQVDS--DAPNAL-EKRCSSLLICLNCLHL 1103
>UniRef50_Q4S160 Cluster: Chromosome 13 SCAF14769, whole genome
shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
Chromosome 13 SCAF14769, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 1558
Score = 44.8 bits (101), Expect = 0.002
Identities = 26/61 (42%), Positives = 34/61 (55%), Gaps = 3/61 (4%)
Frame = +1
Query: 421 YYDFLYSLHISRHHYRKAAAVMYERATRCRVEEKIEGENATGAGRMKWL---AAAITCLR 591
YY+ LY+ H++RH+YRKA VMYE R + E T G K + AA+ CLR
Sbjct: 1188 YYELLYAFHVNRHNYRKAGTVMYEFGMR------LGREVRTRLGLQKQVNCYLAALNCLR 1241
Query: 592 L 594
L
Sbjct: 1242 L 1242
>UniRef50_Q0TZE8 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 1214
Score = 37.1 bits (82), Expect = 0.31
Identities = 14/31 (45%), Positives = 23/31 (74%)
Frame = +1
Query: 418 PYYDFLYSLHISRHHYRKAAAVMYERATRCR 510
PY+ LYS I+R+++R AA++M+ER R +
Sbjct: 1085 PYHQILYSFRIARNNFRGAASIMHERLQRLK 1115
>UniRef50_Q55DW5 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 1786
Score = 35.9 bits (79), Expect = 0.72
Identities = 14/32 (43%), Positives = 22/32 (68%)
Frame = +1
Query: 421 YYDFLYSLHISRHHYRKAAAVMYERATRCRVE 516
Y+ LY+ +ISR +YR A+ + YER+ R +E
Sbjct: 1281 YHTILYAYYISRCNYRNASMIYYERSIRVNIE 1312
>UniRef50_Q2HAG2 Cluster: Putative uncharacterized protein; n=1;
Chaetomium globosum|Rep: Putative uncharacterized protein
- Chaetomium globosum (Soil fungus)
Length = 1216
Score = 35.9 bits (79), Expect = 0.72
Identities = 18/45 (40%), Positives = 25/45 (55%)
Frame = +1
Query: 418 PYYDFLYSLHISRHHYRKAAAVMYERATRCRVEEKIEGENATGAG 552
PY+ LY+ IS + YR AAAV+ +R + R EG+ G G
Sbjct: 1013 PYHQILYAWRISHNDYRGAAAVLLDRLQKLR--RAGEGDRVAGGG 1055
>UniRef50_A7QFQ9 Cluster: Chromosome undetermined scaffold_89, whole
genome shotgun sequence; n=2; core eudicotyledons|Rep:
Chromosome undetermined scaffold_89, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 786
Score = 35.1 bits (77), Expect = 1.3
Identities = 22/63 (34%), Positives = 34/63 (53%), Gaps = 3/63 (4%)
Frame = +1
Query: 415 NPYYDFLYSLHISRHHYRKAAAVMYERATRCRVEEKIE---GENATGAGRMKWLAAAITC 585
NPY LY+ + RH++R+AA+ +Y + R R E + + T R+ L+AAI
Sbjct: 393 NPY-KLLYAFEMHRHNWRRAASYIYLYSARLRTESVLRDCPNLSLTLQERLNGLSAAINA 451
Query: 586 LRL 594
L L
Sbjct: 452 LYL 454
>UniRef50_A5BRV5 Cluster: Putative uncharacterized protein; n=2;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 957
Score = 35.1 bits (77), Expect = 1.3
Identities = 22/63 (34%), Positives = 34/63 (53%), Gaps = 3/63 (4%)
Frame = +1
Query: 415 NPYYDFLYSLHISRHHYRKAAAVMYERATRCRVEEKIE---GENATGAGRMKWLAAAITC 585
NPY LY+ + RH++R+AA+ +Y + R R E + + T R+ L+AAI
Sbjct: 694 NPY-KLLYAFEMHRHNWRRAASYIYLYSARLRTESVLRDCPNLSLTLQERLNGLSAAINA 752
Query: 586 LRL 594
L L
Sbjct: 753 LYL 755
>UniRef50_A6RWG8 Cluster: Putative uncharacterized protein; n=1;
Botryotinia fuckeliana B05.10|Rep: Putative
uncharacterized protein - Botryotinia fuckeliana B05.10
Length = 1198
Score = 34.7 bits (76), Expect = 1.7
Identities = 18/47 (38%), Positives = 26/47 (55%)
Frame = +1
Query: 418 PYYDFLYSLHISRHHYRKAAAVMYERATRCRVEEKIEGENATGAGRM 558
PY+ LY+ ISR +R AAA+ ER R++ E +N G G +
Sbjct: 1049 PYHKILYAWRISRSDFRGAAAISLERL--YRLQASSESDNKIGNGEV 1093
>UniRef50_Q96YL0 Cluster: Putative pterin-4-alpha-carbinolamine
dehydratase; n=2; Sulfolobaceae|Rep: Putative
pterin-4-alpha-carbinolamine dehydratase - Sulfolobus
tokodaii
Length = 93
Score = 34.7 bits (76), Expect = 1.7
Identities = 16/38 (42%), Positives = 21/38 (55%)
Frame = +1
Query: 1 ARGFLRKLVTGSDCLTHHQALVLYYMKVIKLFEIHDAG 114
A FL K+ +D + HH + +YY KVI HDAG
Sbjct: 38 AVNFLNKVQPIADSMNHHPDVCIYYNKVIVQLTTHDAG 75
>UniRef50_A3LMW2 Cluster: Predicted protein; n=1; Pichia
stipitis|Rep: Predicted protein - Pichia stipitis
(Yeast)
Length = 127
Score = 32.3 bits (70), Expect = 8.9
Identities = 15/41 (36%), Positives = 20/41 (48%)
Frame = +1
Query: 10 FLRKLVTGSDCLTHHQALVLYYMKVIKLFEIHDAGACVVRL 132
FL K+ G++ L HH + Y KV L HD G V +
Sbjct: 61 FLNKVADGANSLKHHPTITTTYNKVEFLLTTHDVGHRVTNM 101
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 471,839,041
Number of Sequences: 1657284
Number of extensions: 7395251
Number of successful extensions: 19525
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 19144
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19524
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 41902926763
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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