Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0004_I10
(488 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT011063-1|AAR31134.1| 1037|Drosophila melanogaster LD21010p pro... 29 3.4
BT001632-1|AAN71387.1| 739|Drosophila melanogaster RE38584p pro... 29 3.4
AE014298-2106|AAF48426.1| 495|Drosophila melanogaster CG9081-PA... 29 3.4
AE014297-3844|AAF56499.2| 883|Drosophila melanogaster CG31094-P... 29 3.4
AE014297-3843|AAF56500.3| 1031|Drosophila melanogaster CG31094-P... 29 3.4
AE014296-3229|AAN11635.1| 453|Drosophila melanogaster CG32221-P... 29 3.4
U92536-1|AAD41441.1| 1487|Drosophila melanogaster RECQ helicase ... 28 7.9
AY071583-1|AAL49205.1| 495|Drosophila melanogaster RE63964p pro... 28 7.9
AY059450-1|AAL13356.1| 735|Drosophila melanogaster LD15404p pro... 28 7.9
AE014298-2792|AAF48907.2| 735|Drosophila melanogaster CG32541-P... 28 7.9
AE014297-1368|AAF54691.1| 1487|Drosophila melanogaster CG6920-PA... 28 7.9
>BT011063-1|AAR31134.1| 1037|Drosophila melanogaster LD21010p
protein.
Length = 1037
Score = 29.1 bits (62), Expect = 3.4
Identities = 19/83 (22%), Positives = 30/83 (36%), Gaps = 4/83 (4%)
Frame = +1
Query: 229 CDANRGCNYGCHKIRTNHRYRIVGFVDNTYTGYRPNYRRTYTPNPNDGD---ECEISDID 399
CD ++ C+ G + N R F + ++ + + DG EC + D
Sbjct: 241 CDQSKDCSDGSDEHNCNQTCRADEFTCGNGRCIQKRWKCDHDDDCGDGSDEKECPVVPCD 300
Query: 400 EICTHVCGN-ACTESC*ASSGSP 465
+ H C N AC G P
Sbjct: 301 SVAEHTCTNGACIAKRWVCDGDP 323
>BT001632-1|AAN71387.1| 739|Drosophila melanogaster RE38584p
protein.
Length = 739
Score = 29.1 bits (62), Expect = 3.4
Identities = 19/83 (22%), Positives = 30/83 (36%), Gaps = 4/83 (4%)
Frame = +1
Query: 229 CDANRGCNYGCHKIRTNHRYRIVGFVDNTYTGYRPNYRRTYTPNPNDGD---ECEISDID 399
CD ++ C+ G + N R F + ++ + + DG EC + D
Sbjct: 2 CDQSKDCSDGSDEHNCNQTCRADEFTCGNGRCIQKRWKCDHDDDCGDGSDEKECPVVPCD 61
Query: 400 EICTHVCGN-ACTESC*ASSGSP 465
+ H C N AC G P
Sbjct: 62 SVAEHTCTNGACIAKRWVCDGDP 84
>AE014298-2106|AAF48426.1| 495|Drosophila melanogaster CG9081-PA
protein.
Length = 495
Score = 29.1 bits (62), Expect = 3.4
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +1
Query: 61 LFILVHKDSRNVPDFDKSDSCNHLVNGKQ 147
L ++H+D +N PD ++ D LVN KQ
Sbjct: 392 LIYMLHRDPKNFPDPERFDPDRFLVNEKQ 420
>AE014297-3844|AAF56499.2| 883|Drosophila melanogaster CG31094-PA,
isoform A protein.
Length = 883
Score = 29.1 bits (62), Expect = 3.4
Identities = 19/83 (22%), Positives = 30/83 (36%), Gaps = 4/83 (4%)
Frame = +1
Query: 229 CDANRGCNYGCHKIRTNHRYRIVGFVDNTYTGYRPNYRRTYTPNPNDGD---ECEISDID 399
CD ++ C+ G + N R F + ++ + + DG EC + D
Sbjct: 93 CDQSKDCSDGSDEHNCNQTCRADEFTCGNGRCIQKRWKCDHDDDCGDGSDEKECPVVPCD 152
Query: 400 EICTHVCGN-ACTESC*ASSGSP 465
+ H C N AC G P
Sbjct: 153 SVAEHTCTNGACIAKRWVCDGDP 175
>AE014297-3843|AAF56500.3| 1031|Drosophila melanogaster CG31094-PB,
isoform B protein.
Length = 1031
Score = 29.1 bits (62), Expect = 3.4
Identities = 19/83 (22%), Positives = 30/83 (36%), Gaps = 4/83 (4%)
Frame = +1
Query: 229 CDANRGCNYGCHKIRTNHRYRIVGFVDNTYTGYRPNYRRTYTPNPNDGD---ECEISDID 399
CD ++ C+ G + N R F + ++ + + DG EC + D
Sbjct: 241 CDQSKDCSDGSDEHNCNQTCRADEFTCGNGRCIQKRWKCDHDDDCGDGSDEKECPVVPCD 300
Query: 400 EICTHVCGN-ACTESC*ASSGSP 465
+ H C N AC G P
Sbjct: 301 SVAEHTCTNGACIAKRWVCDGDP 323
>AE014296-3229|AAN11635.1| 453|Drosophila melanogaster CG32221-PA
protein.
Length = 453
Score = 29.1 bits (62), Expect = 3.4
Identities = 11/31 (35%), Positives = 20/31 (64%)
Frame = -3
Query: 93 VPRILMYQYKQLTCTDEMKERLAPASSSASC 1
+P+ + +Y QL C+++MK RL A + + C
Sbjct: 260 LPQFVNLKYLQLYCSEDMKTRLFKALAKSQC 290
>U92536-1|AAD41441.1| 1487|Drosophila melanogaster RECQ helicase
homolog protein.
Length = 1487
Score = 27.9 bits (59), Expect = 7.9
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = +1
Query: 232 DANRGCNYGCHKIRTNHRYRIVGFVDN 312
D+++ Y KI ++ YRIVG+ +N
Sbjct: 1075 DSDKALQYNVKKIHVDNLYRIVGYCEN 1101
>AY071583-1|AAL49205.1| 495|Drosophila melanogaster RE63964p
protein.
Length = 495
Score = 27.9 bits (59), Expect = 7.9
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +1
Query: 61 LFILVHKDSRNVPDFDKSDSCNHLVNGKQ 147
L ++H D +N PD ++ D LVN KQ
Sbjct: 392 LIYMLHHDPKNFPDPERFDPDRFLVNEKQ 420
>AY059450-1|AAL13356.1| 735|Drosophila melanogaster LD15404p
protein.
Length = 735
Score = 27.9 bits (59), Expect = 7.9
Identities = 14/40 (35%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = +2
Query: 362 QMTEMNVKSVIS-MRYAHTSVVTHVRNPAKRAQEAHFRVL 478
++++ ++ V+S R A S V +V+ +R Q HFRVL
Sbjct: 393 EVSDQKIRKVLSDNRIASGSSVGNVKEEQRRVQHNHFRVL 432
>AE014298-2792|AAF48907.2| 735|Drosophila melanogaster CG32541-PA
protein.
Length = 735
Score = 27.9 bits (59), Expect = 7.9
Identities = 14/40 (35%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = +2
Query: 362 QMTEMNVKSVIS-MRYAHTSVVTHVRNPAKRAQEAHFRVL 478
++++ ++ V+S R A S V +V+ +R Q HFRVL
Sbjct: 393 EVSDQKIRKVLSDNRIASGSSVGNVKEEQRRVQHNHFRVL 432
>AE014297-1368|AAF54691.1| 1487|Drosophila melanogaster CG6920-PA
protein.
Length = 1487
Score = 27.9 bits (59), Expect = 7.9
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = +1
Query: 232 DANRGCNYGCHKIRTNHRYRIVGFVDN 312
D+++ Y KI ++ YRIVG+ +N
Sbjct: 1075 DSDKALQYNVKKIHVDNLYRIVGYCEN 1101
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,012,193
Number of Sequences: 53049
Number of extensions: 454988
Number of successful extensions: 1219
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1192
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1219
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1726192251
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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