Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0004_I09
(467 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_08_0319 - 16712572-16712654,16712756-16712797,16713955-167142... 237 4e-63
03_01_0276 + 2124538-2124550,2124678-2124962,2126813-2126854,212... 237 4e-63
02_05_1201 + 34929577-34929589,34930252-34930587,34931378-349314... 229 9e-61
12_02_1115 - 26173351-26173725,26174241-26174344,26174812-26174845 66 2e-11
07_03_0137 + 14101849-14102511 30 1.1
04_04_1586 - 34621945-34623366 30 1.1
06_03_1073 - 27373259-27373304,27373542-27373624,27373719-273743... 29 1.4
04_04_0335 - 24491000-24491003,24491636-24491670,24491875-244919... 29 1.4
08_02_0644 - 19658270-19658626,19659142-19659218,19659256-196594... 29 2.5
12_01_0694 - 5923836-5924450 28 3.3
11_06_0690 + 26303733-26306540 28 3.3
11_01_0122 - 960346-960728,961356-961608 28 3.3
06_03_0458 - 20995834-20996004,20996404-20997309,20997778-209979... 28 3.3
09_06_0153 - 21243108-21245660 28 4.3
09_04_0525 + 18326429-18326780,18327870-18328068,18328597-18329458 28 4.3
06_01_0198 + 1529190-1530371 28 4.3
02_05_0591 - 30183105-30183869 28 4.3
02_04_0663 + 24820745-24821065,24821415-24821861,24821949-248223... 28 4.3
11_04_0068 - 13116037-13116414,13116501-13116947,13117026-131177... 27 5.7
07_03_0138 - 14140653-14140988 27 5.7
03_01_0208 + 1642041-1642118,1642200-1642310,1643157-1643318,164... 27 5.7
02_04_0529 + 23697249-23697419,23697610-23697726,23698292-236983... 27 5.7
02_01_0753 - 5586705-5586766,5587864-5588056,5588154-5588423,558... 27 5.7
01_07_0090 - 41003888-41004716,41005142-41005559,41007010-41007193 27 5.7
01_06_1755 - 39673030-39673338 27 5.7
12_02_1007 - 25248653-25249078,25249956-25250021,25250108-252502... 27 7.5
11_04_0167 + 14382976-14385244,14389373-14389842 27 7.5
08_02_0621 - 19397038-19397076,19397305-19397593,19397676-193978... 27 7.5
05_01_0029 + 187769-188707,188971-189246,189978-190174,190263-19... 27 7.5
02_02_0500 - 10993675-10994067,10994434-10995738 27 7.5
01_03_0103 - 12567986-12568141,12568307-12568442,12568751-125688... 27 7.5
10_05_0088 - 9037516-9037997,9038171-9038513,9039512-9039787 27 10.0
09_06_0199 + 21526872-21527250,21527431-21527594,21527673-215277... 27 10.0
01_06_1201 - 35380338-35380496,35381200-35381322,35381521-353820... 27 10.0
>10_08_0319 -
16712572-16712654,16712756-16712797,16713955-16714239,
16714346-16714358
Length = 140
Score = 237 bits (579), Expect = 4e-63
Identities = 108/132 (81%), Positives = 124/132 (93%)
Frame = +2
Query: 20 MSKRGRGGSAGAKFRISLGLPVGAVINCATDNTGAKNLYVIAVQGIKGRLNRLPAAGSGD 199
MSKRGRGGSAG KFR+SLGLPV A +NCA DNTGAKNLY+I+V+GIKGRLNRLP+A GD
Sbjct: 1 MSKRGRGGSAGNKFRMSLGLPVAATVNCA-DNTGAKNLYIISVKGIKGRLNRLPSACVGD 59
Query: 200 MIVATVKKGKPELRKKVMPAVVIRQRKPFRRRDGVFIYFEDNAGVIVNNKGEMKGSAITG 379
M++ATVKKGKP+LRKKVMPAV++RQRKP+RR+DGV++YFEDNAGVIVN KGEMKGSAITG
Sbjct: 60 MVMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVYMYFEDNAGVIVNPKGEMKGSAITG 119
Query: 380 PVAKECADLWPR 415
P+ KECADLWPR
Sbjct: 120 PIGKECADLWPR 131
>03_01_0276 +
2124538-2124550,2124678-2124962,2126813-2126854,
2126943-2127025
Length = 140
Score = 237 bits (579), Expect = 4e-63
Identities = 108/132 (81%), Positives = 124/132 (93%)
Frame = +2
Query: 20 MSKRGRGGSAGAKFRISLGLPVGAVINCATDNTGAKNLYVIAVQGIKGRLNRLPAAGSGD 199
MSKRGRGGSAG KFR+SLGLPV A +NCA DNTGAKNLY+I+V+GIKGRLNRLP+A GD
Sbjct: 1 MSKRGRGGSAGNKFRMSLGLPVAATVNCA-DNTGAKNLYIISVKGIKGRLNRLPSACVGD 59
Query: 200 MIVATVKKGKPELRKKVMPAVVIRQRKPFRRRDGVFIYFEDNAGVIVNNKGEMKGSAITG 379
M++ATVKKGKP+LRKKVMPAV++RQRKP+RR+DGV++YFEDNAGVIVN KGEMKGSAITG
Sbjct: 60 MVMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVYMYFEDNAGVIVNPKGEMKGSAITG 119
Query: 380 PVAKECADLWPR 415
P+ KECADLWPR
Sbjct: 120 PIGKECADLWPR 131
>02_05_1201 +
34929577-34929589,34930252-34930587,34931378-34931419,
34931630-34931712
Length = 157
Score = 229 bits (560), Expect = 9e-61
Identities = 104/128 (81%), Positives = 120/128 (93%)
Frame = +2
Query: 32 GRGGSAGAKFRISLGLPVGAVINCATDNTGAKNLYVIAVQGIKGRLNRLPAAGSGDMIVA 211
GRGGSAG KFR+SLGLPV A +NCA DNTGAKNLY+I+V+GIKGRLNRLP+A GDM++A
Sbjct: 22 GRGGSAGNKFRMSLGLPVAATVNCA-DNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMA 80
Query: 212 TVKKGKPELRKKVMPAVVIRQRKPFRRRDGVFIYFEDNAGVIVNNKGEMKGSAITGPVAK 391
TVKKGKP+LRKKVMPAV++RQRKP+RR+DGV++YFEDNAGVIVN KGEMKGSAITGP+ K
Sbjct: 81 TVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVYMYFEDNAGVIVNPKGEMKGSAITGPIGK 140
Query: 392 ECADLWPR 415
ECADLWPR
Sbjct: 141 ECADLWPR 148
>12_02_1115 - 26173351-26173725,26174241-26174344,26174812-26174845
Length = 170
Score = 65.7 bits (153), Expect = 2e-11
Identities = 40/98 (40%), Positives = 58/98 (59%), Gaps = 3/98 (3%)
Frame = +2
Query: 110 DNTGAKNLYVIAVQGIKGRLNRLPAAGSGDMIVATVKKGKPELRKK---VMPAVVIRQRK 280
DN+GAK V+ +Q ++G+ A GD I+ +VK+ +P + K V+ VV+R
Sbjct: 62 DNSGAKR--VMCIQSLRGK----KGARLGDTIIGSVKEAQPRGKVKKGDVVYGVVVRAAM 115
Query: 281 PFRRRDGVFIYFEDNAGVIVNNKGEMKGSAITGPVAKE 394
R DG I F+DNA V+VNNKGE+ G+ + GPV E
Sbjct: 116 KRGRNDGSEIQFDDNAIVLVNNKGELIGTRVFGPVPHE 153
>07_03_0137 + 14101849-14102511
Length = 220
Score = 29.9 bits (64), Expect = 1.1
Identities = 20/57 (35%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Frame = +1
Query: 208 GHS*ERQTRTQEKGNASSGDQAAETI*KAGRGVHIFRG*CGGHR-EQQGGDERLGYH 375
G +R +E G A +GD +T +AGRG GG R + +GGD G H
Sbjct: 85 GRGGQRDAGDEEDGKAGAGDGGLQTNQRAGRG--------GGRRGDAEGGDGAAGPH 133
>04_04_1586 - 34621945-34623366
Length = 473
Score = 29.9 bits (64), Expect = 1.1
Identities = 18/58 (31%), Positives = 26/58 (44%)
Frame = +2
Query: 20 MSKRGRGGSAGAKFRISLGLPVGAVINCATDNTGAKNLYVIAVQGIKGRLNRLPAAGS 193
++ RG GG+ + +PVGAV N A + Y + + GI RLP S
Sbjct: 282 LASRGAGGAGSLVLGRTEAVPVGAVWVPLVRNNQASSFYYVGLTGIGVGGERLPLQDS 339
>06_03_1073 -
27373259-27373304,27373542-27373624,27373719-27374397,
27374493-27374563,27374635-27374727,27375855-27375928,
27376016-27376073,27376212-27376349
Length = 413
Score = 29.5 bits (63), Expect = 1.4
Identities = 17/48 (35%), Positives = 26/48 (54%)
Frame = -2
Query: 451 IYSSYGAGVRRNTGP*VSALLSDGSCDSRAFHLPLVVHDDPRIILEIY 308
+ S Y + +R N+ ++DGS DS FH PLV+ DD + +Y
Sbjct: 169 VKSVYQSAIRGNSPFQNIKSINDGSSDS-PFHTPLVLRDDMQTPRTVY 215
>04_04_0335 -
24491000-24491003,24491636-24491670,24491875-24491923,
24492043-24492119,24492207-24492340,24492471-24492578,
24493145-24493214,24493399-24493476,24493592-24493714,
24494238-24494297,24494424-24494468,24494936-24495013,
24495298-24495354,24495623-24495739,24495856-24496026
Length = 401
Score = 29.5 bits (63), Expect = 1.4
Identities = 19/82 (23%), Positives = 32/82 (39%), Gaps = 3/82 (3%)
Frame = -3
Query: 429 ALDAIRGHKSAHSLATGPVIAEPFISPLLFTMTPALSSKYMNTPSRLLNGFRC---LITT 259
+ D +RGH A A+ +S F + KY +T + + G L T
Sbjct: 270 SFDILRGHSRATMFLICNNAAQGILSSFFFKYADTILKKYSSTVATIFTGLASAAFLGHT 329
Query: 258 AGITFFLSSGLPFLTVATIMSP 193
+ F L + F+++ SP
Sbjct: 330 LTVNFLLGISIVFISMHQFFSP 351
>08_02_0644 -
19658270-19658626,19659142-19659218,19659256-19659430,
19659543-19659596,19659691-19659858,19660756-19660953,
19661546-19661632,19661739-19661827,19662499-19662955
Length = 553
Score = 28.7 bits (61), Expect = 2.5
Identities = 15/45 (33%), Positives = 24/45 (53%)
Frame = +1
Query: 253 ASSGDQAAETI*KAGRGVHIFRG*CGGHREQQGGDERLGYHRTRR 387
++ G AA K+G G + GG RE+QG D+ +G + +R
Sbjct: 26 SNKGTPAARKRIKSGGGAREKKENSGGAREEQGKDDSVGEEQVQR 70
>12_01_0694 - 5923836-5924450
Length = 204
Score = 28.3 bits (60), Expect = 3.3
Identities = 20/57 (35%), Positives = 25/57 (43%), Gaps = 1/57 (1%)
Frame = +1
Query: 208 GHS*ERQTRTQEKGNASSGDQAAETI*KAGRGVHIFRG*CGGHR-EQQGGDERLGYH 375
G R +E G A +GD T +AGRG GG R + +GGD G H
Sbjct: 65 GRGDRRDAGDEEDGEAGAGDGGLRTNQRAGRG--------GGRRGDAEGGDGAAGPH 113
>11_06_0690 + 26303733-26306540
Length = 935
Score = 28.3 bits (60), Expect = 3.3
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = -3
Query: 144 AITYRFFAPVLSVAQLITAPTGRPSEMRNFAPAEPPRPLL 25
A+ F PV Q + P + S + A EPP+PLL
Sbjct: 561 AVVGAFTRPVFWSPQPVFVPAAKDSPPESAAATEPPQPLL 600
>11_01_0122 - 960346-960728,961356-961608
Length = 211
Score = 28.3 bits (60), Expect = 3.3
Identities = 17/42 (40%), Positives = 21/42 (50%)
Frame = -2
Query: 439 YGAGVRRNTGP*VSALLSDGSCDSRAFHLPLVVHDDPRIILE 314
YGAG R G +A LSDG C +R L L+ H + E
Sbjct: 62 YGAGGARARGS--AAALSDGVCGARVQQLHLLQHPVKNAVAE 101
>06_03_0458 -
20995834-20996004,20996404-20997309,20997778-20997942,
20998024-20998353,20998471-20998527,20998579-20998692,
20999220-20999381,20999465-20999527,21001100-21001207,
21001598-21001675,21001771-21001902
Length = 761
Score = 28.3 bits (60), Expect = 3.3
Identities = 13/31 (41%), Positives = 20/31 (64%), Gaps = 2/31 (6%)
Frame = +2
Query: 317 EDNAGVIV--NNKGEMKGSAITGPVAKECAD 403
ED +I+ N+KG +GS ITG + + CA+
Sbjct: 715 EDGDKIIMSSNDKGSNQGSFITGKIVESCAE 745
>09_06_0153 - 21243108-21245660
Length = 850
Score = 27.9 bits (59), Expect = 4.3
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = +2
Query: 86 GAVINCATDNTGAKNLYVIAVQG 154
G+ +NCA N L++I +QG
Sbjct: 3 GSAVNCAVQNVSLDTLFLIVIQG 25
>09_04_0525 + 18326429-18326780,18327870-18328068,18328597-18329458
Length = 470
Score = 27.9 bits (59), Expect = 4.3
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = -3
Query: 117 VLSVAQLITAPTGRPSEMRNFAPAEPPRPLL 25
+L +A +I GR + FAP E P+P+L
Sbjct: 373 LLPIASIIAPQMGRITSTSLFAPQEQPKPVL 403
>06_01_0198 + 1529190-1530371
Length = 393
Score = 27.9 bits (59), Expect = 4.3
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = -3
Query: 243 FLSSGLPFLTVATIMSPEPAAGNLFRRPLIPCTAITYRFF 124
+L++ L L VAT++S P AG L +P T F+
Sbjct: 171 YLAAALGALLVATLLSSSPFAGALASLAALPATRFARSFW 210
>02_05_0591 - 30183105-30183869
Length = 254
Score = 27.9 bits (59), Expect = 4.3
Identities = 12/37 (32%), Positives = 17/37 (45%)
Frame = -2
Query: 349 LVVHDDPRIILEIYEHPVPPSKWFPLPDHHCWHYLFP 239
+V H D ++ +Y P P P HH +H L P
Sbjct: 157 MVTHHDMQMHAAMYGGGAVPPPPHPPPHHHAFHQLMP 193
>02_04_0663 +
24820745-24821065,24821415-24821861,24821949-24822317,
24822324-24822835,24822914-24823084,24823284-24823434,
24823664-24823702
Length = 669
Score = 27.9 bits (59), Expect = 4.3
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = -3
Query: 105 AQLITAPTGRPSEMRNFAPAEPP 37
A+ TAP GRP + FAP+ PP
Sbjct: 347 ARPTTAPGGRPPKRPAFAPSAPP 369
>11_04_0068 -
13116037-13116414,13116501-13116947,13117026-13117757,
13118235-13118348
Length = 556
Score = 27.5 bits (58), Expect = 5.7
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = -3
Query: 93 TAPTGRPSEMRNFAPAEPP 37
TAP GRP + FAP+ PP
Sbjct: 520 TAPGGRPPKRPAFAPSAPP 538
>07_03_0138 - 14140653-14140988
Length = 111
Score = 27.5 bits (58), Expect = 5.7
Identities = 20/59 (33%), Positives = 26/59 (44%)
Frame = +1
Query: 208 GHS*ERQTRTQEKGNASSGDQAAETI*KAGRGVHIFRG*CGGHREQQGGDERLGYHRTR 384
G ERQ Q +G S G++ E + G G F G GG E + ER R+R
Sbjct: 46 GREGERQRGRQWRGRGSGGEEGVEGGGEGGEGGG-FGGGEGGGGEVEAAVERRAAERSR 103
>03_01_0208 +
1642041-1642118,1642200-1642310,1643157-1643318,
1643433-1643600,1643683-1643843,1643930-1643991,
1644078-1644127,1644247-1644653,1644760-1644895
Length = 444
Score = 27.5 bits (58), Expect = 5.7
Identities = 16/52 (30%), Positives = 26/52 (50%), Gaps = 6/52 (11%)
Frame = +2
Query: 89 AVINCATDNTGAKNLYVIAVQGIKGRLN----RLPAAGSG--DMIVATVKKG 226
A +N +TGA + + +KG+LN R+P D+++ TVK G
Sbjct: 280 AALNIVPTSTGAAKAVALVLPQLKGKLNGIALRVPTPNVSVVDLVINTVKTG 331
>02_04_0529 +
23697249-23697419,23697610-23697726,23698292-23698348,
23698539-23698616,23698722-23698766,23698858-23698917,
23699340-23699417,23699524-23699646,23699772-23699849,
23700048-23700117,23700317-23700424,23700543-23700676,
23700756-23700832,23701027-23701075,23701689-23701697
Length = 417
Score = 27.5 bits (58), Expect = 5.7
Identities = 19/82 (23%), Positives = 32/82 (39%), Gaps = 3/82 (3%)
Frame = -3
Query: 429 ALDAIRGHKSAHSLATGPVIAEPFISPLLFTMTPALSSKYMNTPSRLLNGFRC---LITT 259
+ + +RGH A A+ +S F + KY +T + + G L T
Sbjct: 296 SFNILRGHSRATMFLICNNAAQGILSSFFFKYADTILKKYSSTVATIFTGLASAAFLGHT 355
Query: 258 AGITFFLSSGLPFLTVATIMSP 193
I F L + F+++ SP
Sbjct: 356 LTINFLLGISVVFISMHQFFSP 377
>02_01_0753 -
5586705-5586766,5587864-5588056,5588154-5588423,
5588522-5588687,5589049-5589209,5590065-5590181,
5590269-5590549,5590750-5590833,5591100-5592542,
5593167-5593575
Length = 1061
Score = 27.5 bits (58), Expect = 5.7
Identities = 10/34 (29%), Positives = 20/34 (58%)
Frame = -3
Query: 249 TFFLSSGLPFLTVATIMSPEPAAGNLFRRPLIPC 148
T+ ++G F ++++ SPE GN F+ ++ C
Sbjct: 422 TYLKAAGNSFAVLSSVSSPEVPCGNCFKVEILYC 455
>01_07_0090 - 41003888-41004716,41005142-41005559,41007010-41007193
Length = 476
Score = 27.5 bits (58), Expect = 5.7
Identities = 19/50 (38%), Positives = 23/50 (46%)
Frame = +2
Query: 41 GSAGAKFRISLGLPVGAVINCATDNTGAKNLYVIAVQGIKGRLNRLPAAG 190
GSA A + L A + AT +TG GI G L+RLPA G
Sbjct: 327 GSAAAIMSATALLQKAAELG-ATTSTGCYGGVAFPAMGIAGGLDRLPAIG 375
>01_06_1755 - 39673030-39673338
Length = 102
Score = 27.5 bits (58), Expect = 5.7
Identities = 16/33 (48%), Positives = 17/33 (51%), Gaps = 3/33 (9%)
Frame = +1
Query: 289 KAGRGVHIFRG*CGGHREQQG---GDERLGYHR 378
+AGRG H G GGH G GD LG HR
Sbjct: 41 RAGRGHHHGNGGGGGHLGYSGSRHGDAHLGGHR 73
>12_02_1007 -
25248653-25249078,25249956-25250021,25250108-25250260,
25250961-25251336,25252001-25252143
Length = 387
Score = 27.1 bits (57), Expect = 7.5
Identities = 11/33 (33%), Positives = 16/33 (48%)
Frame = -3
Query: 228 LPFLTVATIMSPEPAAGNLFRRPLIPCTAITYR 130
LP+ ++ P PAA L+ RP P + R
Sbjct: 333 LPYPPYPAVLLPPPAAATLYGRPPAPAPGVAAR 365
>11_04_0167 + 14382976-14385244,14389373-14389842
Length = 912
Score = 27.1 bits (57), Expect = 7.5
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -3
Query: 465 FVP*RYIQAMELALDAIRGHKSAHSLA 385
F+P + Q M +ALD RG + H LA
Sbjct: 674 FIPLTWTQRMTIALDVARGIEYLHGLA 700
>08_02_0621 -
19397038-19397076,19397305-19397593,19397676-19397824,
19399030-19399839,19399926-19400105,19400450-19400674,
19400750-19401157
Length = 699
Score = 27.1 bits (57), Expect = 7.5
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = -3
Query: 108 VAQLITAPTGRPSEMRNFAPAEPP 37
+A+ TAP GRP + AP+ PP
Sbjct: 361 IARSTTAPGGRPPKRHASAPSAPP 384
>05_01_0029 +
187769-188707,188971-189246,189978-190174,190263-190404,
190584-190862,190941-191013,191331-191379,192169-192433,
192576-192631,192777-192845,193028-193139,193682-193771,
193955-194125,194449-194506,194970-195128,195379-195401
Length = 985
Score = 27.1 bits (57), Expect = 7.5
Identities = 15/46 (32%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Frame = +2
Query: 278 KPFRRRDGVFIYFEDNAGVIVNNKGEMKGSAITGPVAKEC-ADLWP 412
KP D V + DN GV+V+ G GS+ +C A+++P
Sbjct: 214 KPLSGGDEVMLLV-DNVGVVVDRSGHPVGSSFVFNTTPDCIAEVYP 258
>02_02_0500 - 10993675-10994067,10994434-10995738
Length = 565
Score = 27.1 bits (57), Expect = 7.5
Identities = 21/72 (29%), Positives = 36/72 (50%), Gaps = 4/72 (5%)
Frame = -3
Query: 378 PVIAEPFISPLLFTMTPALSSKYMNTPSRLLNGFRCLITT--AGITFFL--SSGLPFLTV 211
P EP I+ ++PA+ +T S + NG+ +++T +G +F+ SSG + V
Sbjct: 225 PAPVEPIIANGKVKLSPAVMEMIYSTISGIENGYLPVMSTEGSGGVYFMKDSSGESNVAV 284
Query: 210 ATIMSPEPAAGN 175
+ EP A N
Sbjct: 285 FKPIDEEPMAKN 296
>01_03_0103 - 12567986-12568141,12568307-12568442,12568751-12568824,
12568932-12569175,12569480-12569766,12570618-12571103,
12571348-12571459,12571540-12571745,12573071-12573276,
12573831-12574162,12574284-12574825,12574967-12576308,
12576386-12576457,12578438-12578505,12579011-12580174
Length = 1808
Score = 27.1 bits (57), Expect = 7.5
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = -2
Query: 292 PSKWFPLPDHHCW 254
P WFP PD +CW
Sbjct: 1420 PWFWFPSPDRNCW 1432
>10_05_0088 - 9037516-9037997,9038171-9038513,9039512-9039787
Length = 366
Score = 26.6 bits (56), Expect = 10.0
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = -3
Query: 105 AQLITAPTGRPSEMRNFAPAEP 40
A+ TAP+GRP FAP+ P
Sbjct: 297 ARPTTAPSGRPPRRPTFAPSAP 318
>09_06_0199 +
21526872-21527250,21527431-21527594,21527673-21527736,
21528001-21528134,21528302-21528385,21528526-21528600,
21528683-21528754,21528852-21528925,21529185-21529282,
21529355-21529464,21529794-21529862,21529944-21530018,
21530519-21530611,21530690-21530769,21530877-21530976,
21531150-21531586,21531676-21531706,21532873-21533822,
21533982-21534201
Length = 1102
Score = 26.6 bits (56), Expect = 10.0
Identities = 12/37 (32%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Frame = -2
Query: 322 ILEIYEHPVPPSKWFPLPDHHCWHYLFP-EFWFAFLN 215
IL Y+H +P L + HC + P + W F+N
Sbjct: 737 ILGCYDHLLPEHIRLDLQEQHCNDHKVPDDLWLEFIN 773
>01_06_1201 -
35380338-35380496,35381200-35381322,35381521-35382066,
35382285-35382392,35382695-35383225,35383614-35383743,
35384225-35385081,35385303-35385408,35387119-35387230,
35389255-35389347,35389723-35389771,35389859-35389897,
35390671-35390757,35391613-35391873,35391957-35392166,
35392413-35393507
Length = 1501
Score = 26.6 bits (56), Expect = 10.0
Identities = 15/34 (44%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Frame = -3
Query: 123 APVLSVAQLIT-APTGRPSEMRNFAPAEPPRPLL 25
AP L + +++ APT P R F P PP+PLL
Sbjct: 771 APRLRLRRMLPPAPTRNPGACR-FIPLLPPKPLL 803
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,729,633
Number of Sequences: 37544
Number of extensions: 347868
Number of successful extensions: 1170
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 1129
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1167
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 943260316
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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