Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0004_I08
         (567 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           26   0.99 
DQ974174-1|ABJ52814.1|  391|Anopheles gambiae serpin 18 protein.       24   3.0  
AJ010299-1|CAA09070.1|  722|Anopheles gambiae stat protein.            23   5.3  
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    23   6.9  

>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 25.8 bits (54), Expect = 0.99
 Identities = 9/28 (32%), Positives = 18/28 (64%)
 Frame = +1

Query: 322  ARRHGNLTPVRHPADHHSVPRRQEEESH 405
            ++RH + +P+RH  +   + RRQ ++ H
Sbjct: 1472 SKRHQSASPIRHILNSPLLNRRQRKKQH 1499


>DQ974174-1|ABJ52814.1|  391|Anopheles gambiae serpin 18 protein.
          Length = 391

 Score = 24.2 bits (50), Expect = 3.0
 Identities = 19/68 (27%), Positives = 29/68 (42%), Gaps = 1/68 (1%)
 Frame = +2

Query: 65  IECFSFLNRALESETAPVVIMATNRGITRIRGTNYRSPH-GIPLDLLDRMIIVPTTPYTH 241
           +E F F+N    + T  V  M T   + R      R     +P D    + ++   PY  
Sbjct: 201 LELFQFIN----APTQRVSTMHTTAFVRRCLHNELRCKVVDMPFDAASGLSMLVLLPYDG 256

Query: 242 QELREILN 265
            ELR+I+N
Sbjct: 257 TELRQIVN 264


>AJ010299-1|CAA09070.1|  722|Anopheles gambiae stat protein.
          Length = 722

 Score = 23.4 bits (48), Expect = 5.3
 Identities = 12/49 (24%), Positives = 21/49 (42%)
 Frame = +2

Query: 359 QLITTASLVAKRRKATEVSMEDVKKVYSSFLDEHRSEQFLKEYQDEFMF 505
           +L    +L+   R    +SM    +V     DE+    + K Y+D+  F
Sbjct: 453 KLFEVPNLIPWNRLVEAISMTFSARVGRGLTDENMQYMYRKAYRDKLSF 501


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 23.0 bits (47), Expect = 6.9
 Identities = 10/21 (47%), Positives = 11/21 (52%)
 Frame = +3

Query: 129 PRTGA*LGSGARTTGAPMGYP 191
           P   A LG G R  G P+G P
Sbjct: 558 PGLSAPLGLGMRPQGGPLGLP 578


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 561,777
Number of Sequences: 2352
Number of extensions: 11248
Number of successful extensions: 16
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 53404389
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)