Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0004_I07
(562 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z37983-1|CAA86061.1| 276|Caenorhabditis elegans Hypothetical pr... 215 2e-56
Z93398-8|CAJ80823.1| 3424|Caenorhabditis elegans Hypothetical pr... 29 1.7
Z93398-5|CAD90186.2| 3436|Caenorhabditis elegans Hypothetical pr... 29 1.7
Z93398-3|CAH04742.1| 3322|Caenorhabditis elegans Hypothetical pr... 29 1.7
Z93398-2|CAH04741.1| 3323|Caenorhabditis elegans Hypothetical pr... 29 1.7
Z93398-1|CAH04740.1| 3405|Caenorhabditis elegans Hypothetical pr... 29 1.7
Z92788-8|CAJ80815.1| 3424|Caenorhabditis elegans Hypothetical pr... 29 1.7
Z92788-5|CAD90175.2| 3436|Caenorhabditis elegans Hypothetical pr... 29 1.7
Z92788-3|CAH04710.1| 3322|Caenorhabditis elegans Hypothetical pr... 29 1.7
Z92788-2|CAH04709.1| 3323|Caenorhabditis elegans Hypothetical pr... 29 1.7
Z92788-1|CAH04708.1| 3405|Caenorhabditis elegans Hypothetical pr... 29 1.7
AJ505904-1|CAD44515.1| 3436|Caenorhabditis elegans VAB-10A prote... 29 1.7
AJ505903-1|CAD44514.1| 3436|Caenorhabditis elegans VAB-10A prote... 29 1.7
AJ505815-1|CAD44323.1| 3436|Caenorhabditis elegans VAB-10A prote... 29 1.7
Z35599-2|CAD91629.2| 584|Caenorhabditis elegans Hypothetical pr... 28 4.0
Z35599-1|CAA84659.2| 581|Caenorhabditis elegans Hypothetical pr... 28 4.0
U41544-1|AAA83183.2| 2275|Caenorhabditis elegans Hypothetical pr... 28 4.0
U23412-5|AAK21467.2| 492|Caenorhabditis elegans Hypothetical pr... 27 7.0
>Z37983-1|CAA86061.1| 276|Caenorhabditis elegans Hypothetical
protein B0393.1 protein.
Length = 276
Score = 215 bits (525), Expect = 2e-56
Identities = 96/166 (57%), Positives = 122/166 (73%)
Frame = +2
Query: 35 MSGGLDLLALSEEDVTKMLAATTHLGAENVNFQMETYVYKRRGDGTHVINLRRTWEKXXX 214
MSGG AL+EEDV K+LA HLG+ N+NFQM+ YVYKRR DG ++IN+++TWEK
Sbjct: 1 MSGGAAHSALTEEDVMKLLATQAHLGSTNLNFQMQQYVYKRRFDGPNIINVKKTWEKLLL 60
Query: 215 XXXXXXXXEDPADVFVISSRAFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPM 394
E+PADV V+S+R + QRA+LKFAAHTGAT I GRF+PG TNQIQ F+EP
Sbjct: 61 AARAIAAVENPADVVVVSARPYAQRALLKFAAHTGATAIFGRFSPGCLTNQIQKTFKEPR 120
Query: 395 LLIVLDPAQDHQPITEAFYVNIPVIALCNTDSPLRFVDIAIPCNTK 532
LL++ DP DHQ +TEA YV +PVI+ NT+SPL+ +DI +PCN K
Sbjct: 121 LLVISDPRIDHQAVTEASYVGVPVISFVNTESPLKLIDIGVPCNNK 166
>Z93398-8|CAJ80823.1| 3424|Caenorhabditis elegans Hypothetical protein
ZK1151.1h protein.
Length = 3424
Score = 29.5 bits (63), Expect = 1.7
Identities = 16/57 (28%), Positives = 26/57 (45%)
Frame = +2
Query: 272 RAFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPMLLIVLDPAQDHQPITE 442
+A G L+ A H G+F GA +I A + L ++ P++ Q +TE
Sbjct: 3124 QATGDLLTLRDALHQNKIDSNGKFVEGANRLKISDAVKSGRLTVIASPSEAVQAVTE 3180
>Z93398-5|CAD90186.2| 3436|Caenorhabditis elegans Hypothetical protein
ZK1151.1a protein.
Length = 3436
Score = 29.5 bits (63), Expect = 1.7
Identities = 16/57 (28%), Positives = 26/57 (45%)
Frame = +2
Query: 272 RAFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPMLLIVLDPAQDHQPITE 442
+A G L+ A H G+F GA +I A + L ++ P++ Q +TE
Sbjct: 3136 QATGDLLTLRDALHQNKIDSNGKFVEGANRLKISDAVKSGRLTVIASPSEAVQAVTE 3192
>Z93398-3|CAH04742.1| 3322|Caenorhabditis elegans Hypothetical protein
ZK1151.1f protein.
Length = 3322
Score = 29.5 bits (63), Expect = 1.7
Identities = 16/57 (28%), Positives = 26/57 (45%)
Frame = +2
Query: 272 RAFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPMLLIVLDPAQDHQPITE 442
+A G L+ A H G+F GA +I A + L ++ P++ Q +TE
Sbjct: 3022 QATGDLLTLRDALHQNKIDSNGKFVEGANRLKISDAVKSGRLTVIASPSEAVQAVTE 3078
>Z93398-2|CAH04741.1| 3323|Caenorhabditis elegans Hypothetical protein
ZK1151.1e protein.
Length = 3323
Score = 29.5 bits (63), Expect = 1.7
Identities = 16/57 (28%), Positives = 26/57 (45%)
Frame = +2
Query: 272 RAFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPMLLIVLDPAQDHQPITE 442
+A G L+ A H G+F GA +I A + L ++ P++ Q +TE
Sbjct: 3023 QATGDLLTLRDALHQNKIDSNGKFVEGANRLKISDAVKSGRLTVIASPSEAVQAVTE 3079
>Z93398-1|CAH04740.1| 3405|Caenorhabditis elegans Hypothetical protein
ZK1151.1d protein.
Length = 3405
Score = 29.5 bits (63), Expect = 1.7
Identities = 16/57 (28%), Positives = 26/57 (45%)
Frame = +2
Query: 272 RAFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPMLLIVLDPAQDHQPITE 442
+A G L+ A H G+F GA +I A + L ++ P++ Q +TE
Sbjct: 3105 QATGDLLTLRDALHQNKIDSNGKFVEGANRLKISDAVKSGRLTVIASPSEAVQAVTE 3161
>Z92788-8|CAJ80815.1| 3424|Caenorhabditis elegans Hypothetical protein
ZK1151.1h protein.
Length = 3424
Score = 29.5 bits (63), Expect = 1.7
Identities = 16/57 (28%), Positives = 26/57 (45%)
Frame = +2
Query: 272 RAFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPMLLIVLDPAQDHQPITE 442
+A G L+ A H G+F GA +I A + L ++ P++ Q +TE
Sbjct: 3124 QATGDLLTLRDALHQNKIDSNGKFVEGANRLKISDAVKSGRLTVIASPSEAVQAVTE 3180
>Z92788-5|CAD90175.2| 3436|Caenorhabditis elegans Hypothetical protein
ZK1151.1a protein.
Length = 3436
Score = 29.5 bits (63), Expect = 1.7
Identities = 16/57 (28%), Positives = 26/57 (45%)
Frame = +2
Query: 272 RAFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPMLLIVLDPAQDHQPITE 442
+A G L+ A H G+F GA +I A + L ++ P++ Q +TE
Sbjct: 3136 QATGDLLTLRDALHQNKIDSNGKFVEGANRLKISDAVKSGRLTVIASPSEAVQAVTE 3192
>Z92788-3|CAH04710.1| 3322|Caenorhabditis elegans Hypothetical protein
ZK1151.1f protein.
Length = 3322
Score = 29.5 bits (63), Expect = 1.7
Identities = 16/57 (28%), Positives = 26/57 (45%)
Frame = +2
Query: 272 RAFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPMLLIVLDPAQDHQPITE 442
+A G L+ A H G+F GA +I A + L ++ P++ Q +TE
Sbjct: 3022 QATGDLLTLRDALHQNKIDSNGKFVEGANRLKISDAVKSGRLTVIASPSEAVQAVTE 3078
>Z92788-2|CAH04709.1| 3323|Caenorhabditis elegans Hypothetical protein
ZK1151.1e protein.
Length = 3323
Score = 29.5 bits (63), Expect = 1.7
Identities = 16/57 (28%), Positives = 26/57 (45%)
Frame = +2
Query: 272 RAFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPMLLIVLDPAQDHQPITE 442
+A G L+ A H G+F GA +I A + L ++ P++ Q +TE
Sbjct: 3023 QATGDLLTLRDALHQNKIDSNGKFVEGANRLKISDAVKSGRLTVIASPSEAVQAVTE 3079
>Z92788-1|CAH04708.1| 3405|Caenorhabditis elegans Hypothetical protein
ZK1151.1d protein.
Length = 3405
Score = 29.5 bits (63), Expect = 1.7
Identities = 16/57 (28%), Positives = 26/57 (45%)
Frame = +2
Query: 272 RAFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPMLLIVLDPAQDHQPITE 442
+A G L+ A H G+F GA +I A + L ++ P++ Q +TE
Sbjct: 3105 QATGDLLTLRDALHQNKIDSNGKFVEGANRLKISDAVKSGRLTVIASPSEAVQAVTE 3161
>AJ505904-1|CAD44515.1| 3436|Caenorhabditis elegans VAB-10A protein
protein.
Length = 3436
Score = 29.5 bits (63), Expect = 1.7
Identities = 16/57 (28%), Positives = 26/57 (45%)
Frame = +2
Query: 272 RAFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPMLLIVLDPAQDHQPITE 442
+A G L+ A H G+F GA +I A + L ++ P++ Q +TE
Sbjct: 3136 QATGDLLTLRDALHQNKIDSNGKFVEGANRLKISDAVKSGRLTVIASPSEAVQAVTE 3192
>AJ505903-1|CAD44514.1| 3436|Caenorhabditis elegans VAB-10A protein
protein.
Length = 3436
Score = 29.5 bits (63), Expect = 1.7
Identities = 16/57 (28%), Positives = 26/57 (45%)
Frame = +2
Query: 272 RAFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPMLLIVLDPAQDHQPITE 442
+A G L+ A H G+F GA +I A + L ++ P++ Q +TE
Sbjct: 3136 QATGDLLTLRDALHQNKIDSNGKFVEGANRLKISDAVKSGRLTVIASPSEAVQAVTE 3192
>AJ505815-1|CAD44323.1| 3436|Caenorhabditis elegans VAB-10A protein
protein.
Length = 3436
Score = 29.5 bits (63), Expect = 1.7
Identities = 16/57 (28%), Positives = 26/57 (45%)
Frame = +2
Query: 272 RAFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPMLLIVLDPAQDHQPITE 442
+A G L+ A H G+F GA +I A + L ++ P++ Q +TE
Sbjct: 3136 QATGDLLTLRDALHQNKIDSNGKFVEGANRLKISDAVKSGRLTVIASPSEAVQAVTE 3192
>Z35599-2|CAD91629.2| 584|Caenorhabditis elegans Hypothetical
protein F25F2.1b protein.
Length = 584
Score = 28.3 bits (60), Expect = 4.0
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = +3
Query: 99 PPIWERKMLISRWRRTFINAVVTVRT 176
PP + RK+L + WR +++ VT+ T
Sbjct: 100 PPNFARKVLEAEWREMYVDPKVTIET 125
>Z35599-1|CAA84659.2| 581|Caenorhabditis elegans Hypothetical
protein F25F2.1a protein.
Length = 581
Score = 28.3 bits (60), Expect = 4.0
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = +3
Query: 99 PPIWERKMLISRWRRTFINAVVTVRT 176
PP + RK+L + WR +++ VT+ T
Sbjct: 100 PPNFARKVLEAEWREMYVDPKVTIET 125
>U41544-1|AAA83183.2| 2275|Caenorhabditis elegans Hypothetical protein
M03A8.2 protein.
Length = 2275
Score = 28.3 bits (60), Expect = 4.0
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = -3
Query: 194 YAED*LRAYRHHGVYKRTSPSGN*HFPLPNGWSPQA 87
+A+D Y HH V ++ SPS N + G+SP A
Sbjct: 1838 WADDHDLTYTHHDVVRQESPSFNCNISPIKGYSPPA 1873
>U23412-5|AAK21467.2| 492|Caenorhabditis elegans Hypothetical
protein T10F2.4 protein.
Length = 492
Score = 27.5 bits (58), Expect = 7.0
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +2
Query: 239 EDPADVFVISSRAFGQRAVLKFAAHTGATPIA 334
EDP V +S F +R ++KF A G PI+
Sbjct: 13 EDPV-VSQVSGHIFDRRLIVKFIAENGTDPIS 43
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,402,662
Number of Sequences: 27780
Number of extensions: 247185
Number of successful extensions: 598
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 577
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 598
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1155524042
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -