Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0004_I04
         (581 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    23   2.5  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    23   2.5  
AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    21   5.8  
EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive pep...    21   7.6  
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    21   7.6  

>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 22.6 bits (46), Expect = 2.5
 Identities = 7/20 (35%), Positives = 13/20 (65%)
 Frame = -1

Query: 92  VRKCIFKFWLAGVVSQIANI 33
           VRKC++K W    +S+  ++
Sbjct: 141 VRKCLYKLWKMPSLSEFLSL 160


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 22.6 bits (46), Expect = 2.5
 Identities = 7/20 (35%), Positives = 13/20 (65%)
 Frame = -1

Query: 92  VRKCIFKFWLAGVVSQIANI 33
           VRKC++K W    +S+  ++
Sbjct: 141 VRKCLYKLWKMPSLSEFLSL 160


>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -3

Query: 345 HNALCHHNHSSGHHM 301
           H A+ HHN  S HH+
Sbjct: 343 HQAMLHHNPMS-HHL 356


>EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive
           peptide receptor 2 protein.
          Length = 354

 Score = 21.0 bits (42), Expect = 7.6
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +1

Query: 520 SQTKLCINTGHNTLLHCND 576
           S++KL I  GH  +  C+D
Sbjct: 235 SKSKLLIPVGHIPIRQCDD 253


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 21.0 bits (42), Expect = 7.6
 Identities = 11/39 (28%), Positives = 16/39 (41%)
 Frame = -3

Query: 333 CHHNHSSGHHMDVVVAETAAEDHGRHNLVHH*TSLRERG 217
           CH   SS    +     +A+  H  H  V + T   +RG
Sbjct: 138 CHQGFSSSTWCNYSAYSSASRHHVDHQPVPYLTPADDRG 176



 Score = 21.0 bits (42), Expect = 7.6
 Identities = 9/30 (30%), Positives = 17/30 (56%)
 Frame = -3

Query: 330 HHNHSSGHHMDVVVAETAAEDHGRHNLVHH 241
           +H+H +GHH+           H +H++V+H
Sbjct: 321 NHHHHAGHHI-----------HAQHHVVNH 339


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 118,702
Number of Sequences: 336
Number of extensions: 2244
Number of successful extensions: 10
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14517299
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)