Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0004_I03
         (471 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY060620-1|AAL28168.1|  210|Drosophila melanogaster GH04443p pro...   140   7e-34
AE013599-580|AAF59143.1|  210|Drosophila melanogaster CG12770-PA...   140   7e-34
AY118377-1|AAM48406.1| 1265|Drosophila melanogaster RE24170p pro...    28   7.3  
AE014296-2323|AAF49788.1| 1265|Drosophila melanogaster CG9206-PA...    28   7.3  

>AY060620-1|AAL28168.1|  210|Drosophila melanogaster GH04443p
           protein.
          Length = 210

 Score =  140 bits (340), Expect = 7e-34
 Identities = 61/81 (75%), Positives = 74/81 (91%)
 Frame = +2

Query: 227 MQDTRPELYEEVKLYRNAREREKHDNMAELYAVVSTLQHLEKAYMRDCVRAQEYTAACSR 406
           MQ+  PELYEEVKL+RNAREREK+DNMA+LYA+++T+Q LEKAY+RDC+  QEYTAACS+
Sbjct: 1   MQEQSPELYEEVKLFRNAREREKYDNMADLYAIINTIQQLEKAYIRDCITPQEYTAACSK 60

Query: 407 LLVQYKVAFKQVQADEFPNIE 469
            LVQYKVAFKQVQ DEFP++E
Sbjct: 61  YLVQYKVAFKQVQCDEFPSVE 81


>AE013599-580|AAF59143.1|  210|Drosophila melanogaster CG12770-PA
           protein.
          Length = 210

 Score =  140 bits (340), Expect = 7e-34
 Identities = 61/81 (75%), Positives = 74/81 (91%)
 Frame = +2

Query: 227 MQDTRPELYEEVKLYRNAREREKHDNMAELYAVVSTLQHLEKAYMRDCVRAQEYTAACSR 406
           MQ+  PELYEEVKL+RNAREREK+DNMA+LYA+++T+Q LEKAY+RDC+  QEYTAACS+
Sbjct: 1   MQEQSPELYEEVKLFRNAREREKYDNMADLYAIINTIQQLEKAYIRDCITPQEYTAACSK 60

Query: 407 LLVQYKVAFKQVQADEFPNIE 469
            LVQYKVAFKQVQ DEFP++E
Sbjct: 61  YLVQYKVAFKQVQCDEFPSVE 81


>AY118377-1|AAM48406.1| 1265|Drosophila melanogaster RE24170p protein.
          Length = 1265

 Score = 27.9 bits (59), Expect = 7.3
 Identities = 16/58 (27%), Positives = 28/58 (48%)
 Frame = +2

Query: 218  YTNMQDTRPELYEEVKLYRNAREREKHDNMAELYAVVSTLQHLEKAYMRDCVRAQEYT 391
            Y +  D   + YEE  L    +E+E  + M  L + +  L+  EK+ +RD ++    T
Sbjct: 1028 YEHAVDKWKQKYEETSLQLQLKEKEFEETMDHLQSDIDALES-EKSDLRDKLKLNSTT 1084


>AE014296-2323|AAF49788.1| 1265|Drosophila melanogaster CG9206-PA
            protein.
          Length = 1265

 Score = 27.9 bits (59), Expect = 7.3
 Identities = 16/58 (27%), Positives = 28/58 (48%)
 Frame = +2

Query: 218  YTNMQDTRPELYEEVKLYRNAREREKHDNMAELYAVVSTLQHLEKAYMRDCVRAQEYT 391
            Y +  D   + YEE  L    +E+E  + M  L + +  L+  EK+ +RD ++    T
Sbjct: 1028 YEHAVDKWKQKYEETSLQLQLKEKEFEETMDHLQSDIDALES-EKSDLRDKLKLNSTT 1084


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,495,184
Number of Sequences: 53049
Number of extensions: 364862
Number of successful extensions: 1073
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1056
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1073
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1601407269
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)