Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0004_I02
(527 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_08_0633 + 19446075-19446488,19446607-19446975,19447961-194480... 71 4e-13
07_03_0905 + 22459687-22460071,22461766-22461888,22461986-224620... 65 3e-11
08_01_0341 + 3011238-3011246,3011824-3012192,3012412-3012505,301... 65 4e-11
04_04_0666 + 27086568-27086975,27087073-27087477,27088542-270886... 52 2e-07
01_06_0931 - 33139383-33139580,33139748-33139870,33142520-331428... 46 2e-05
02_05_0181 - 26522849-26522932,26523053-26523184,26523263-265233... 42 4e-04
03_01_0177 + 1424773-1424850,1425307-1425391,1425498-1425577,142... 32 0.33
12_01_0748 - 6728221-6728305,6728788-6728842,6729202-6729289,672... 31 0.57
07_03_0172 + 14697741-14697869,14697878-14697998,14698134-146982... 31 0.57
04_04_0933 + 29495656-29496972,29497244-29497819,29499414-294996... 29 2.3
03_05_1014 - 29687343-29687410,29688054-29688191,29689246-296892... 29 3.1
12_01_0298 - 2250517-2251235,2251331-2251577,2251615-2252951,225... 28 4.0
02_02_0725 + 13367157-13367364,13367492-13367773,13367985-13369195 28 4.0
08_02_0703 - 20188489-20190246 28 5.3
12_02_0870 - 23852923-23853228,23853416-23853728,23853813-238539... 27 7.1
09_02_0525 - 10217332-10217498,10217537-10217750 27 7.1
08_01_0540 + 4691929-4692014,4692915-4693125,4693756-4693885,469... 27 7.1
05_07_0193 - 28319783-28320211,28320798-28320925,28321543-283218... 27 9.3
05_01_0192 + 1394342-1396645 27 9.3
04_04_1275 + 32321161-32321285,32321849-32322071,32322187-323223... 27 9.3
>10_08_0633 +
19446075-19446488,19446607-19446975,19447961-19448054,
19448137-19448174,19448770-19448916,19449580-19449679,
19449786-19450744,19451143-19451295
Length = 757
Score = 71.3 bits (167), Expect = 4e-13
Identities = 37/101 (36%), Positives = 61/101 (60%), Gaps = 5/101 (4%)
Frame = +1
Query: 232 RNPTLMTVILNPVANKRKAKKEFEKYCEPLLHLAGLQIDVIHTASEGNAKEIVESLHGT- 408
R+P + VILNP + ++ K F EP+ LAG +++V+ T G+AK +V ++ +
Sbjct: 230 RSPPKILVILNPRSGHGRSSKVFHGKVEPIFKLAGFKMEVVKTTHAGHAKSLVSTIDFST 289
Query: 409 --EAIIVAGGDGTLSETVTGLLRRNDE--ANRFPLGILPLG 519
+ I+ GGDG ++E + GLL R+D+ A P+GI+P G
Sbjct: 290 CPDGIVCVGGDGIVNEVLNGLLCRDDQNVAVSVPIGIIPAG 330
>07_03_0905 +
22459687-22460071,22461766-22461888,22461986-22462086,
22462229-22462301,22462771-22462848,22462995-22463065,
22463539-22463841,22464180-22464302,22464539-22464736
Length = 484
Score = 65.3 bits (152), Expect = 3e-11
Identities = 43/131 (32%), Positives = 67/131 (51%), Gaps = 7/131 (5%)
Frame = +1
Query: 148 KERYEINIIMRAACKEAAKYGEAV---IPMERNPTLMTVILNPVANKRKAKKEFEKYCEP 318
+ER ++ + + AA +G+A+ + P + +I+NP KR +K F+ P
Sbjct: 98 REREREVVVEMESEEAAAAWGDAMRDRLASLGRPKRLFIIVNPYGGKRGGRKIFQTEVLP 157
Query: 319 LLHLAGLQIDVIHTASEGNAKEIVES--LHGTEAIIVAGGDGTLSETVTGLLRRND--EA 486
L+ AG+ + T +A+EI S L + I+ GDG L E V GLL+R D A
Sbjct: 158 LIEAAGILYTMQETKHRLHAQEIAHSLDLRKYDGIVCVSGDGVLVEVVNGLLQREDWNTA 217
Query: 487 NRFPLGILPLG 519
+ PLGI+P G
Sbjct: 218 IKIPLGIIPAG 228
>08_01_0341 +
3011238-3011246,3011824-3012192,3012412-3012505,
3012594-3012631,3012862-3013008,3013912-3014011,
3014615-3015042,3015234-3015389
Length = 446
Score = 64.9 bits (151), Expect = 4e-11
Identities = 35/94 (37%), Positives = 57/94 (60%), Gaps = 5/94 (5%)
Frame = +1
Query: 253 VILNPVANKRKAKKEFEKYCEPLLHLAGLQIDVIHTASEGNAKEIVESLHGT---EAIIV 423
VILNP + R +++ F + +P L L+G + V+ TA G+A + ++ + + II
Sbjct: 102 VILNPNSGFRSSREVFYQKVQPTLELSGFMMQVVETAYAGHAHALASTVDLSTCPDGIIC 161
Query: 424 AGGDGTLSETVTGLLRRND--EANRFPLGILPLG 519
GGDG ++E + GLL R+D EA + P+GI+P G
Sbjct: 162 VGGDGIVNEVLNGLLGRDDLEEAIQLPIGIIPAG 195
>04_04_0666 +
27086568-27086975,27087073-27087477,27088542-27088635,
27088731-27088768,27088853-27088999,27089167-27089266,
27090001-27090953,27091512-27091569,27092904-27093022
Length = 773
Score = 52.4 bits (120), Expect = 2e-07
Identities = 37/117 (31%), Positives = 56/117 (47%), Gaps = 21/117 (17%)
Frame = +1
Query: 232 RNPTLMTVILNPVANKRKAKKEFEKYCEPLLH----------------LAGLQIDVIHTA 363
R P + VILNP + ++ K F EP+ LAG ++V+ T
Sbjct: 224 RTPPRILVILNPRSGHGRSCKVFHDKAEPIFKVPSDTLIMQASTYCSALAGFHMEVVKTT 283
Query: 364 SEGNAKEIVESLHGT---EAIIVAGGDGTLSETVTGLLRRND--EANRFPLGILPLG 519
G+AK + + + + I+ GGDG ++E GLL R+D EA P+GI+P G
Sbjct: 284 HAGHAKSLASTFDFSAFPDGIVCVGGDGIVNEVFNGLLSRSDRAEAVSIPVGIIPAG 340
>01_06_0931 -
33139383-33139580,33139748-33139870,33142520-33142891,
33143380-33143450,33143769-33143810,33143895-33143967,
33144518-33144679,33144778-33144878,33144992-33145114,
33145296-33145689
Length = 552
Score = 46.0 bits (104), Expect = 2e-05
Identities = 22/73 (30%), Positives = 39/73 (53%), Gaps = 2/73 (2%)
Frame = +1
Query: 238 PTLMTVILNPVANKRKAKKEFEKYCEPLLHLAGLQIDVIHTASEGNAKEIVESLH--GTE 411
P + +++NP K+ KK +E +PL AG+ + + T +G+A+++ SL +
Sbjct: 134 PKRLFILVNPFGGKKCGKKIYEAEIKPLFEAAGVNVTMQETRYQGHARQVASSLDLARYD 193
Query: 412 AIIVAGGDGTLSE 450
I+ GDG L E
Sbjct: 194 GIVCVSGDGVLVE 206
>02_05_0181 -
26522849-26522932,26523053-26523184,26523263-26523329,
26523800-26524186,26524259-26524360,26524983-26525132,
26525552-26525636,26525743-26525769,26525858-26526116,
26526659-26526751,26526921-26527013,26527122-26527289,
26527436-26527594,26528214-26528273,26528392-26528487
Length = 653
Score = 41.5 bits (93), Expect = 4e-04
Identities = 31/110 (28%), Positives = 52/110 (47%), Gaps = 6/110 (5%)
Frame = +1
Query: 187 CKEAAKYGEAVIPMERN-PTLMTVILNPVANKRKAKKEFEKYCEPLLHLAGLQIDVIHTA 363
CK ++ + I E++ P + V ++P+ K + K +E PL A ++ VI T
Sbjct: 139 CKTWVEHIKTCINKEQDRPKSLMVFVHPLCGKGRGCKNWETVA-PLFERAKVKTKVIVTQ 197
Query: 364 SEGNAKEIVESLHGTE-----AIIVAGGDGTLSETVTGLLRRNDEANRFP 498
G+A + + SL + +I GGDG +E + GLL N +P
Sbjct: 198 RAGHAYDTLASLSDKDLKKFDGVIAVGGDGLFNEILNGLLSTR-HTNSYP 246
>03_01_0177 +
1424773-1424850,1425307-1425391,1425498-1425577,
1425771-1425898,1425962-1426049,1426187-1426277,
1426712-1426881,1427151-1427438,1427527-1427643,
1427924-1427976,1428029-1428090,1429042-1429118,
1429269-1429322,1429417-1429476,1429581-1429658,
1429805-1429851,1429933-1430051,1430280-1430364,
1430443-1430557,1430662-1430784,1430869-1430969,
1431346-1431475
Length = 742
Score = 31.9 bits (69), Expect = 0.33
Identities = 17/47 (36%), Positives = 23/47 (48%), Gaps = 8/47 (17%)
Frame = +1
Query: 403 GTEAIIVAGGDGTLSETVTGLLRRNDEANRF--------PLGILPLG 519
G +A+I GGDGTL E V G + + LG++PLG
Sbjct: 462 GADAVIAVGGDGTLHEVVNGFFCKGSPVHALDQGPDHSTALGLIPLG 508
>12_01_0748 -
6728221-6728305,6728788-6728842,6729202-6729289,
6729681-6729818,6729978-6730142,6730235-6730354,
6730555-6730631,6730738-6731113,6731523-6732617
Length = 732
Score = 31.1 bits (67), Expect = 0.57
Identities = 15/35 (42%), Positives = 24/35 (68%)
Frame = +1
Query: 415 IIVAGGDGTLSETVTGLLRRNDEANRFPLGILPLG 519
I+V GGDGT++ + + ++N E+ P+ ILPLG
Sbjct: 390 ILVCGGDGTVAWVLDAIEKQNYESPP-PVSILPLG 423
>07_03_0172 +
14697741-14697869,14697878-14697998,14698134-14698226,
14700888-14700946,14701003-14701599,14702813-14703020,
14703102-14703178,14703263-14703302,14703413-14703473,
14704120-14704189,14705014-14705235
Length = 558
Score = 31.1 bits (67), Expect = 0.57
Identities = 16/39 (41%), Positives = 26/39 (66%), Gaps = 2/39 (5%)
Frame = -1
Query: 512 GKIPKGKRLASSFLLNS--PVTVSDNVPSPPATMIASVP 402
GK + KR++++ L NS PVTV +P+ PAT+ ++P
Sbjct: 128 GKSSQQKRISTNQLYNSGIPVTVPSPLPAIPATLDENIP 166
>04_04_0933 +
29495656-29496972,29497244-29497819,29499414-29499650,
29499736-29500048,29500191-29500300
Length = 850
Score = 29.1 bits (62), Expect = 2.3
Identities = 13/37 (35%), Positives = 22/37 (59%)
Frame = -1
Query: 440 VPSPPATMIASVPCNDSTISLALPSDAVCITSICNPA 330
VP+PP+T++AS ++ S + SD C + +PA
Sbjct: 333 VPAPPSTVLASALRFSTSTSYDIGSDVACSSGSYSPA 369
>03_05_1014 - 29687343-29687410,29688054-29688191,29689246-29689294,
29689623-29689728,29690184-29690332,29690840-29690921,
29691308-29691360,29691644-29691729,29691855-29691909,
29692179-29692579,29693564-29693660,29694191-29694322,
29694426-29694476,29694659-29694751,29694917-29694992,
29695711-29695856,29696009-29696043,29696056-29696107,
29696290-29696401,29696617-29696813,29697456-29697560,
29697667-29697819,29698317-29698424,29698608-29698752,
29699374-29699432,29701397-29701441,29701677-29701730,
29701901-29702113,29702873-29702958,29704492-29704572,
29704670-29704729,29705599-29705644,29706212-29706286,
29706376-29706512,29708306-29708366,29708726-29708743,
29709710-29709743,29709811-29709902,29709997-29710029
Length = 1260
Score = 28.7 bits (61), Expect = 3.1
Identities = 11/27 (40%), Positives = 19/27 (70%)
Frame = +2
Query: 380 KRLWSHYMVQKLSLLLEVMEHCLRLLQ 460
+++W H +VQ+ + L + HCLRL+Q
Sbjct: 928 QKIW-HCLVQQTAALTNPLRHCLRLVQ 953
>12_01_0298 -
2250517-2251235,2251331-2251577,2251615-2252951,
2256029-2256188
Length = 820
Score = 28.3 bits (60), Expect = 4.0
Identities = 16/43 (37%), Positives = 24/43 (55%)
Frame = -1
Query: 485 ASSFLLNSPVTVSDNVPSPPATMIASVPCNDSTISLALPSDAV 357
A SF+ P S +VPS P +++ S P S+ S+A S A+
Sbjct: 308 ACSFMPREPAPTSPSVPSSPQSVVPSNPAASSS-SVASSSPAL 349
>02_02_0725 + 13367157-13367364,13367492-13367773,13367985-13369195
Length = 566
Score = 28.3 bits (60), Expect = 4.0
Identities = 15/41 (36%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Frame = -1
Query: 482 SSFLLNSPVTVSDNVPSPPATMIASVPCNDSTIS-LALPSD 363
S+ + NSP + + P PP A NDST+ + LP D
Sbjct: 76 SALMQNSPPSSPETGPIPPQETAAGAGNNDSTVDPVDLPED 116
>08_02_0703 - 20188489-20190246
Length = 585
Score = 27.9 bits (59), Expect = 5.3
Identities = 20/66 (30%), Positives = 29/66 (43%), Gaps = 3/66 (4%)
Frame = -1
Query: 503 PKGKRLASSFLLN---SPVTVSDNVPSPPATMIASVPCNDSTISLALPSDAVCITSICNP 333
P+ +R A L + S V S +P A +DST + +P + + ICN
Sbjct: 380 PRARRDAGMALYHLSLSAVNQSKLARAPAAAKNLLSIASDSTTAEPMPIRRLALMVICNL 439
Query: 332 AKCKSG 315
AKC G
Sbjct: 440 AKCAEG 445
>12_02_0870 -
23852923-23853228,23853416-23853728,23853813-23853938,
23854038-23854243,23854311-23854443,23854607-23854688,
23854785-23854914,23855034-23855126,23855211-23855333,
23855786-23855977,23858230-23858394,23858697-23858768,
23858826-23858945,23859873-23859949,23860032-23860398,
23860738-23861871
Length = 1212
Score = 27.5 bits (58), Expect = 7.1
Identities = 13/35 (37%), Positives = 22/35 (62%)
Frame = +1
Query: 415 IIVAGGDGTLSETVTGLLRRNDEANRFPLGILPLG 519
++V GGDGT++ + + ++ EA P+ ILP G
Sbjct: 403 VLVCGGDGTVAWVLDAIEKQKFEAPP-PVAILPAG 436
>09_02_0525 - 10217332-10217498,10217537-10217750
Length = 126
Score = 27.5 bits (58), Expect = 7.1
Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 5/54 (9%)
Frame = +1
Query: 346 DVIHTASEGNAK--EIVE--SLHGTEAI-IVAGGDGTLSETVTGLLRRNDEANR 492
D + T+ G + E VE S+ G +A+ ++A G T+ ETV +LRR R
Sbjct: 70 DTVVTSDGGGVEGMEAVEESSISGNDAVPLLARGGDTMRETVEAMLRRARRGRR 123
>08_01_0540 +
4691929-4692014,4692915-4693125,4693756-4693885,
4695422-4696072,4696179-4696395,4697040-4697111,
4697167-4697257,4697367-4698363,4698914-4699044,
4699584-4699802,4700110-4700805,4700912-4701121,
4701606-4701710
Length = 1271
Score = 27.5 bits (58), Expect = 7.1
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +3
Query: 213 SSHSNGEESNAYDCNTQPSSKQEESKKR 296
+ NGEES+A + QP Q +SKK+
Sbjct: 675 TDQKNGEESSAGNKRKQPPKAQSKSKKK 702
>05_07_0193 -
28319783-28320211,28320798-28320925,28321543-28321888,
28322386-28322454
Length = 323
Score = 27.1 bits (57), Expect = 9.3
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = +2
Query: 368 RVMPKRLWSHYMVQKLSLLLEVMEHCLRL 454
+VMP RL S YM+ + LL+ + C++L
Sbjct: 219 QVMPMRLTSKYMLVPVFLLIGAVVACIKL 247
>05_01_0192 + 1394342-1396645
Length = 767
Score = 27.1 bits (57), Expect = 9.3
Identities = 12/40 (30%), Positives = 21/40 (52%)
Frame = -1
Query: 452 VSDNVPSPPATMIASVPCNDSTISLALPSDAVCITSICNP 333
VS PSPPA+ ++ P N ++ A + I++ +P
Sbjct: 296 VSTTTPSPPASTVSMPPTNSVAVASAPANSTAGISNAGSP 335
>04_04_1275 +
32321161-32321285,32321849-32322071,32322187-32322309,
32322391-32322519,32322939-32323024,32323233-32323356,
32323531-32323579,32323808-32323890,32323975-32324042,
32324187-32324264,32324460-32324547,32324640-32324756,
32324844-32325176
Length = 541
Score = 27.1 bits (57), Expect = 9.3
Identities = 16/51 (31%), Positives = 26/51 (50%)
Frame = +1
Query: 367 EGNAKEIVESLHGTEAIIVAGGDGTLSETVTGLLRRNDEANRFPLGILPLG 519
+ N I + +IVAGGDGT S + G++ ++ P+ +PLG
Sbjct: 140 KSNGDPIAFQIQSNLRLIVAGGDGTAS-WLLGVVSDLKLSHPPPIATVPLG 189
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,022,792
Number of Sequences: 37544
Number of extensions: 271695
Number of successful extensions: 890
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 852
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 885
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1166441080
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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