Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0004_I02
(527 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U39850-10|AAA81060.2| 439|Caenorhabditis elegans Hypothetical p... 89 2e-18
Z66494-6|CAE48497.1| 423|Caenorhabditis elegans Hypothetical pr... 42 2e-04
Z66494-5|CAA91259.1| 473|Caenorhabditis elegans Hypothetical pr... 42 2e-04
U40426-4|AAP40527.1| 144|Caenorhabditis elegans Diacylglycerol ... 36 0.018
U40426-3|AAP40528.1| 351|Caenorhabditis elegans Diacylglycerol ... 36 0.018
U40426-2|AAP40526.1| 536|Caenorhabditis elegans Diacylglycerol ... 36 0.018
Z19155-3|CAA79558.2| 812|Caenorhabditis elegans Hypothetical pr... 33 0.13
Z69662-9|CAA93507.2| 1782|Caenorhabditis elegans Hypothetical pr... 30 1.2
Z69662-8|CAA93506.2| 1776|Caenorhabditis elegans Hypothetical pr... 30 1.2
Z68214-8|CAA92449.2| 1782|Caenorhabditis elegans Hypothetical pr... 30 1.2
Z68214-7|CAA92448.2| 1776|Caenorhabditis elegans Hypothetical pr... 30 1.2
AY396716-1|AAR29589.1| 1800|Caenorhabditis elegans DAF-15 protein. 30 1.2
Z72505-1|CAA96608.1| 338|Caenorhabditis elegans Hypothetical pr... 29 1.6
Z83217-5|CAB05684.2| 1565|Caenorhabditis elegans Hypothetical pr... 29 2.1
AM086627-1|CAJ31105.1| 1565|Caenorhabditis elegans KIN-4 protein... 29 2.1
U23449-6|AAC24300.2| 937|Caenorhabditis elegans Hypothetical pr... 29 2.7
Z29095-7|CAA82352.2| 319|Caenorhabditis elegans Hypothetical pr... 28 3.6
Z92973-4|CAE18004.2| 328|Caenorhabditis elegans Hypothetical pr... 28 4.8
Z78066-9|CAN86643.1| 2488|Caenorhabditis elegans Hypothetical pr... 27 6.3
Z78066-6|CAB51467.1| 2484|Caenorhabditis elegans Hypothetical pr... 27 6.3
Z78066-4|CAB01522.2| 2607|Caenorhabditis elegans Hypothetical pr... 27 6.3
Z68296-5|CAD59142.2| 1677|Caenorhabditis elegans Hypothetical pr... 27 8.3
Z68296-4|CAA92591.3| 1838|Caenorhabditis elegans Hypothetical pr... 27 8.3
Z48582-1|CAA88465.1| 490|Caenorhabditis elegans Hypothetical pr... 27 8.3
U61952-9|AAB03165.1| 1321|Caenorhabditis elegans Temporarily ass... 27 8.3
U61952-8|AAB03166.1| 1372|Caenorhabditis elegans Temporarily ass... 27 8.3
AY373340-1|AAQ76550.1| 1007|Caenorhabditis elegans BAM-2 protein. 27 8.3
AC024853-1|AAO21419.1| 1007|Caenorhabditis elegans Branching abn... 27 8.3
>U39850-10|AAA81060.2| 439|Caenorhabditis elegans Hypothetical
protein F52C9.3 protein.
Length = 439
Score = 88.6 bits (210), Expect = 2e-18
Identities = 52/156 (33%), Positives = 79/156 (50%), Gaps = 2/156 (1%)
Frame = +1
Query: 58 KIVKFSKTVRNNWKKSVFGVIAFYYGAATVKERYEINIIMRAACKEAAKYGEAVIPMERN 237
KI + KT+ + KK++F Y GA V I + K A KYGE + E
Sbjct: 7 KIGRLPKTLYEHKKKTIFFSFLGYLGADWVYRWDRNQGIRKEYAKIAVKYGETTVSPETR 66
Query: 238 PTLMTVILNPVANKRKAKKEFEKYCEPLLHLAGLQIDVIHTASEGNAKEIVESLHGTEA- 414
P + V++N N R +F K PL HLAG+Q+DV+ ++ + + ++ EA
Sbjct: 67 PKRVFVLVNVEGNSRGCFDQFNKNALPLFHLAGVQVDVVKADNQAQLEALAGAVDTQEAD 126
Query: 415 -IIVAGGDGTLSETVTGLLRRNDEANRFPLGILPLG 519
+ V GGDGT+ VTG+ R ++A + P+G P G
Sbjct: 127 ILYVVGGDGTIGTVVTGIFRNREKA-QLPVGFYPGG 161
>Z66494-6|CAE48497.1| 423|Caenorhabditis elegans Hypothetical
protein C34C6.5b protein.
Length = 423
Score = 42.3 bits (95), Expect = 2e-04
Identities = 27/105 (25%), Positives = 51/105 (48%), Gaps = 6/105 (5%)
Frame = +1
Query: 223 PMERNPTLMTVILNPVANKRKAKKEFEKYCEPLLHLAGLQIDVIHTASEGNAKEIVES-- 396
P E+ + V +NP + K+ + F P L + ++ +V+ T +A+ ++ +
Sbjct: 30 PQEQCRGNLLVFINPNSGTGKSLETFANTVGPKLDKSLIRYEVVVTTGPNHARNVLMTKA 89
Query: 397 -LHGTEAIIVAGGDGTLSETVTGLLRRNDEANRF---PLGILPLG 519
L +++ GDG + E + G+L R D F P+GI+P G
Sbjct: 90 DLGKFNGVLILSGDGLVFEALNGILCREDAFRIFPTLPIGIVPSG 134
>Z66494-5|CAA91259.1| 473|Caenorhabditis elegans Hypothetical
protein C34C6.5a protein.
Length = 473
Score = 42.3 bits (95), Expect = 2e-04
Identities = 27/105 (25%), Positives = 51/105 (48%), Gaps = 6/105 (5%)
Frame = +1
Query: 223 PMERNPTLMTVILNPVANKRKAKKEFEKYCEPLLHLAGLQIDVIHTASEGNAKEIVES-- 396
P E+ + V +NP + K+ + F P L + ++ +V+ T +A+ ++ +
Sbjct: 80 PQEQCRGNLLVFINPNSGTGKSLETFANTVGPKLDKSLIRYEVVVTTGPNHARNVLMTKA 139
Query: 397 -LHGTEAIIVAGGDGTLSETVTGLLRRNDEANRF---PLGILPLG 519
L +++ GDG + E + G+L R D F P+GI+P G
Sbjct: 140 DLGKFNGVLILSGDGLVFEALNGILCREDAFRIFPTLPIGIVPSG 184
>U40426-4|AAP40527.1| 144|Caenorhabditis elegans Diacylglycerol
kinase protein 2,isoform b protein.
Length = 144
Score = 35.9 bits (79), Expect = 0.018
Identities = 28/103 (27%), Positives = 52/103 (50%)
Frame = +1
Query: 211 EAVIPMERNPTLMTVILNPVANKRKAKKEFEKYCEPLLHLAGLQIDVIHTASEGNAKEIV 390
E + +E+ +M VI+NP + K+ + LH A + +DV+ + + + I
Sbjct: 8 EIPVDIEKWRPIM-VIVNPKSGSGAGKQLLRNF-RAHLHPAQV-VDVLKSNIAASLRWID 64
Query: 391 ESLHGTEAIIVAGGDGTLSETVTGLLRRNDEANRFPLGILPLG 519
E + I++AGGDGT+ + + + + R P+ +LPLG
Sbjct: 65 EHPNVDVRILIAGGDGTICSALDQI---DTLSRRIPVAVLPLG 104
>U40426-3|AAP40528.1| 351|Caenorhabditis elegans Diacylglycerol
kinase protein 2,isoform c protein.
Length = 351
Score = 35.9 bits (79), Expect = 0.018
Identities = 28/103 (27%), Positives = 52/103 (50%)
Frame = +1
Query: 211 EAVIPMERNPTLMTVILNPVANKRKAKKEFEKYCEPLLHLAGLQIDVIHTASEGNAKEIV 390
E + +E+ +M VI+NP + K+ + LH A + +DV+ + + + I
Sbjct: 8 EIPVDIEKWRPIM-VIVNPKSGSGAGKQLLRNF-RAHLHPAQV-VDVLKSNIAASLRWID 64
Query: 391 ESLHGTEAIIVAGGDGTLSETVTGLLRRNDEANRFPLGILPLG 519
E + I++AGGDGT+ + + + + R P+ +LPLG
Sbjct: 65 EHPNVDVRILIAGGDGTICSALDQI---DTLSRRIPVAVLPLG 104
>U40426-2|AAP40526.1| 536|Caenorhabditis elegans Diacylglycerol
kinase protein 2,isoform a protein.
Length = 536
Score = 35.9 bits (79), Expect = 0.018
Identities = 28/103 (27%), Positives = 52/103 (50%)
Frame = +1
Query: 211 EAVIPMERNPTLMTVILNPVANKRKAKKEFEKYCEPLLHLAGLQIDVIHTASEGNAKEIV 390
E + +E+ +M VI+NP + K+ + LH A + +DV+ + + + I
Sbjct: 193 EIPVDIEKWRPIM-VIVNPKSGSGAGKQLLRNF-RAHLHPAQV-VDVLKSNIAASLRWID 249
Query: 391 ESLHGTEAIIVAGGDGTLSETVTGLLRRNDEANRFPLGILPLG 519
E + I++AGGDGT+ + + + + R P+ +LPLG
Sbjct: 250 EHPNVDVRILIAGGDGTICSALDQI---DTLSRRIPVAVLPLG 289
>Z19155-3|CAA79558.2| 812|Caenorhabditis elegans Hypothetical
protein F54G8.2 protein.
Length = 812
Score = 33.1 bits (72), Expect = 0.13
Identities = 25/91 (27%), Positives = 46/91 (50%)
Frame = +1
Query: 247 MTVILNPVANKRKAKKEFEKYCEPLLHLAGLQIDVIHTASEGNAKEIVESLHGTEAIIVA 426
+ V++NP + ++ K +K+ E LL+ + D+ T E ++ +L I+V
Sbjct: 428 LLVLVNPKSGGKQGVKILQKF-EYLLNPRQVY-DLSKTGPEPGL-QLFSTLKNCN-ILVC 483
Query: 427 GGDGTLSETVTGLLRRNDEANRFPLGILPLG 519
GGDGT+ + + + R P+ +LPLG
Sbjct: 484 GGDGTIGWVLESMDKMTFPHGRPPVAVLPLG 514
>Z69662-9|CAA93507.2| 1782|Caenorhabditis elegans Hypothetical protein
C10C5.6b protein.
Length = 1782
Score = 29.9 bits (64), Expect = 1.2
Identities = 22/71 (30%), Positives = 33/71 (46%), Gaps = 5/71 (7%)
Frame = +1
Query: 142 TVKERYEINIIMRAACKEAAKYGEAVIP-----MERNPTLMTVILNPVANKRKAKKEFEK 306
TVK + + IM AA E +P E + TL TVI NP+ + + +
Sbjct: 1205 TVKGAFRKSDIMDAALMEFTPRRTKAVPGDFAVKEESKTLRTVIENPIVSTQFVAWCSKV 1264
Query: 307 YCEPLLHLAGL 339
+ EP+LH+ L
Sbjct: 1265 FVEPILHVITL 1275
>Z69662-8|CAA93506.2| 1776|Caenorhabditis elegans Hypothetical protein
C10C5.6a protein.
Length = 1776
Score = 29.9 bits (64), Expect = 1.2
Identities = 22/71 (30%), Positives = 33/71 (46%), Gaps = 5/71 (7%)
Frame = +1
Query: 142 TVKERYEINIIMRAACKEAAKYGEAVIP-----MERNPTLMTVILNPVANKRKAKKEFEK 306
TVK + + IM AA E +P E + TL TVI NP+ + + +
Sbjct: 1199 TVKGAFRKSDIMDAALMEFTPRRTKAVPGDFAVKEESKTLRTVIENPIVSTQFVAWCSKV 1258
Query: 307 YCEPLLHLAGL 339
+ EP+LH+ L
Sbjct: 1259 FVEPILHVITL 1269
>Z68214-8|CAA92449.2| 1782|Caenorhabditis elegans Hypothetical protein
C10C5.6b protein.
Length = 1782
Score = 29.9 bits (64), Expect = 1.2
Identities = 22/71 (30%), Positives = 33/71 (46%), Gaps = 5/71 (7%)
Frame = +1
Query: 142 TVKERYEINIIMRAACKEAAKYGEAVIP-----MERNPTLMTVILNPVANKRKAKKEFEK 306
TVK + + IM AA E +P E + TL TVI NP+ + + +
Sbjct: 1205 TVKGAFRKSDIMDAALMEFTPRRTKAVPGDFAVKEESKTLRTVIENPIVSTQFVAWCSKV 1264
Query: 307 YCEPLLHLAGL 339
+ EP+LH+ L
Sbjct: 1265 FVEPILHVITL 1275
>Z68214-7|CAA92448.2| 1776|Caenorhabditis elegans Hypothetical protein
C10C5.6a protein.
Length = 1776
Score = 29.9 bits (64), Expect = 1.2
Identities = 22/71 (30%), Positives = 33/71 (46%), Gaps = 5/71 (7%)
Frame = +1
Query: 142 TVKERYEINIIMRAACKEAAKYGEAVIP-----MERNPTLMTVILNPVANKRKAKKEFEK 306
TVK + + IM AA E +P E + TL TVI NP+ + + +
Sbjct: 1199 TVKGAFRKSDIMDAALMEFTPRRTKAVPGDFAVKEESKTLRTVIENPIVSTQFVAWCSKV 1258
Query: 307 YCEPLLHLAGL 339
+ EP+LH+ L
Sbjct: 1259 FVEPILHVITL 1269
>AY396716-1|AAR29589.1| 1800|Caenorhabditis elegans DAF-15 protein.
Length = 1800
Score = 29.9 bits (64), Expect = 1.2
Identities = 22/71 (30%), Positives = 33/71 (46%), Gaps = 5/71 (7%)
Frame = +1
Query: 142 TVKERYEINIIMRAACKEAAKYGEAVIP-----MERNPTLMTVILNPVANKRKAKKEFEK 306
TVK + + IM AA E +P E + TL TVI NP+ + + +
Sbjct: 1223 TVKGAFRKSDIMDAALMEFTPRRTKAVPGDFAVKEESKTLRTVIENPIVSTQFVAWCSKV 1282
Query: 307 YCEPLLHLAGL 339
+ EP+LH+ L
Sbjct: 1283 FVEPILHVITL 1293
>Z72505-1|CAA96608.1| 338|Caenorhabditis elegans Hypothetical
protein C50C10.2 protein.
Length = 338
Score = 29.5 bits (63), Expect = 1.6
Identities = 14/64 (21%), Positives = 31/64 (48%)
Frame = +1
Query: 196 AAKYGEAVIPMERNPTLMTVILNPVANKRKAKKEFEKYCEPLLHLAGLQIDVIHTASEGN 375
A+ YG + P MT++++P N+R + ++ P L + L + + + + G
Sbjct: 116 ASNYGVMICPFMVCLMRMTIMVSPRHNERYCRLIMYRFAIPFLFIVPLALSLFNVTTVGF 175
Query: 376 AKEI 387
K++
Sbjct: 176 CKQL 179
>Z83217-5|CAB05684.2| 1565|Caenorhabditis elegans Hypothetical protein
C10C6.1 protein.
Length = 1565
Score = 29.1 bits (62), Expect = 2.1
Identities = 14/45 (31%), Positives = 25/45 (55%)
Frame = -1
Query: 449 SDNVPSPPATMIASVPCNDSTISLALPSDAVCITSICNPAKCKSG 315
+ +V S PAT+ ++ P N S ++ + PS + + +PA SG
Sbjct: 1393 TSSVASAPATLPSTTPSNLSRMASSSPSSSASNSGTSSPAATSSG 1437
>AM086627-1|CAJ31105.1| 1565|Caenorhabditis elegans KIN-4 protein
protein.
Length = 1565
Score = 29.1 bits (62), Expect = 2.1
Identities = 14/45 (31%), Positives = 25/45 (55%)
Frame = -1
Query: 449 SDNVPSPPATMIASVPCNDSTISLALPSDAVCITSICNPAKCKSG 315
+ +V S PAT+ ++ P N S ++ + PS + + +PA SG
Sbjct: 1393 TSSVASAPATLPSTTPSNLSRMASSSPSSSASNSGTSSPAATSSG 1437
>U23449-6|AAC24300.2| 937|Caenorhabditis elegans Hypothetical
protein K06A1.6 protein.
Length = 937
Score = 28.7 bits (61), Expect = 2.7
Identities = 25/91 (27%), Positives = 39/91 (42%)
Frame = +1
Query: 247 MTVILNPVANKRKAKKEFEKYCEPLLHLAGLQIDVIHTASEGNAKEIVESLHGTEAIIVA 426
+ V +NP + K K C LL+ + D+ E+ + I+V
Sbjct: 419 LLVFVNPKSGGNKGSKALHTLCW-LLNPRQV-FDITSLKGPKFGLEMFRKVVTQLRILVC 476
Query: 427 GGDGTLSETVTGLLRRNDEANRFPLGILPLG 519
GGDGT+ ++ L N A P+ I+PLG
Sbjct: 477 GGDGTVGWVLSTLDNLNWPAYP-PMAIMPLG 506
>Z29095-7|CAA82352.2| 319|Caenorhabditis elegans Hypothetical
protein R10E11.7 protein.
Length = 319
Score = 28.3 bits (60), Expect = 3.6
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = -2
Query: 115 HQTPIFSNYYALFWKILQFF 56
HQ FSNYY++F+ + FF
Sbjct: 170 HQITTFSNYYSVFFPFVAFF 189
>Z92973-4|CAE18004.2| 328|Caenorhabditis elegans Hypothetical
protein Y6G8.4 protein.
Length = 328
Score = 27.9 bits (59), Expect = 4.8
Identities = 16/57 (28%), Positives = 27/57 (47%)
Frame = -1
Query: 206 YLAASLHAALIIMLISYLSLTVAAP**KAITPNTDFFQLLRTVLENFTIFSMFCQYL 36
+ +ASLH L++ML+SY+SL K + F L+ + FC ++
Sbjct: 15 FASASLHWILLMMLLSYISLPFYIYVHKINKQREESFPLIMKQFYKMVKIAYFCFFM 71
>Z78066-9|CAN86643.1| 2488|Caenorhabditis elegans Hypothetical protein
W06A7.3f protein.
Length = 2488
Score = 27.5 bits (58), Expect = 6.3
Identities = 27/78 (34%), Positives = 35/78 (44%), Gaps = 8/78 (10%)
Frame = +1
Query: 211 EAVIPME--RNPTLMTVILNPVANKRKAKKEFEKYCEPL------LHLAGLQIDVIHTAS 366
E +IP+E + PT+ P R K E K +PL + A L I + T S
Sbjct: 1618 ERIIPIEVEQAPTI------PQRPPRAPKSELPKVAKPLDDSKSRVRFAPLNIKLGRTYS 1671
Query: 367 EGNAKEIVESLHGTEAII 420
E KE+VESL II
Sbjct: 1672 EEQQKELVESLERPLTII 1689
>Z78066-6|CAB51467.1| 2484|Caenorhabditis elegans Hypothetical protein
W06A7.3c protein.
Length = 2484
Score = 27.5 bits (58), Expect = 6.3
Identities = 27/78 (34%), Positives = 35/78 (44%), Gaps = 8/78 (10%)
Frame = +1
Query: 211 EAVIPME--RNPTLMTVILNPVANKRKAKKEFEKYCEPL------LHLAGLQIDVIHTAS 366
E +IP+E + PT+ P R K E K +PL + A L I + T S
Sbjct: 1618 ERIIPIEVEQAPTI------PQRPPRAPKSELPKVAKPLDDSKSRVRFAPLNIKLGRTYS 1671
Query: 367 EGNAKEIVESLHGTEAII 420
E KE+VESL II
Sbjct: 1672 EEQQKELVESLERPLTII 1689
>Z78066-4|CAB01522.2| 2607|Caenorhabditis elegans Hypothetical protein
W06A7.3a protein.
Length = 2607
Score = 27.5 bits (58), Expect = 6.3
Identities = 27/78 (34%), Positives = 35/78 (44%), Gaps = 8/78 (10%)
Frame = +1
Query: 211 EAVIPME--RNPTLMTVILNPVANKRKAKKEFEKYCEPL------LHLAGLQIDVIHTAS 366
E +IP+E + PT+ P R K E K +PL + A L I + T S
Sbjct: 1618 ERIIPIEVEQAPTI------PQRPPRAPKSELPKVAKPLDDSKSRVRFAPLNIKLGRTYS 1671
Query: 367 EGNAKEIVESLHGTEAII 420
E KE+VESL II
Sbjct: 1672 EEQQKELVESLERPLTII 1689
>Z68296-5|CAD59142.2| 1677|Caenorhabditis elegans Hypothetical
protein C46C2.1b protein.
Length = 1677
Score = 27.1 bits (57), Expect = 8.3
Identities = 10/26 (38%), Positives = 18/26 (69%)
Frame = -1
Query: 485 ASSFLLNSPVTVSDNVPSPPATMIAS 408
AS ++N+P +++ P+P AT +AS
Sbjct: 881 ASGLVINTPASIASPSPAPSATDVAS 906
>Z68296-4|CAA92591.3| 1838|Caenorhabditis elegans Hypothetical
protein C46C2.1a protein.
Length = 1838
Score = 27.1 bits (57), Expect = 8.3
Identities = 10/26 (38%), Positives = 18/26 (69%)
Frame = -1
Query: 485 ASSFLLNSPVTVSDNVPSPPATMIAS 408
AS ++N+P +++ P+P AT +AS
Sbjct: 881 ASGLVINTPASIASPSPAPSATDVAS 906
>Z48582-1|CAA88465.1| 490|Caenorhabditis elegans Hypothetical
protein F27E5.3 protein.
Length = 490
Score = 27.1 bits (57), Expect = 8.3
Identities = 13/32 (40%), Positives = 20/32 (62%), Gaps = 2/32 (6%)
Frame = -1
Query: 515 SGKIPKGKRLAS--SFLLNSPVTVSDNVPSPP 426
+ +P G AS + +L+SP + DN+PSPP
Sbjct: 317 TSNVPSGTSEASITNPILHSPPSKFDNIPSPP 348
>U61952-9|AAB03165.1| 1321|Caenorhabditis elegans Temporarily
assigned gene nameprotein 137, isoform b protein.
Length = 1321
Score = 27.1 bits (57), Expect = 8.3
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = +1
Query: 415 IIVAGGDGTLSETVTGLLRRNDEANRFPLGILPLG 519
++V GGDGT+ ++ R N ++ L ILPLG
Sbjct: 297 VLVCGGDGTVGWVLSAFDRLNLH-SKCQLAILPLG 330
>U61952-8|AAB03166.1| 1372|Caenorhabditis elegans Temporarily
assigned gene nameprotein 137, isoform a protein.
Length = 1372
Score = 27.1 bits (57), Expect = 8.3
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = +1
Query: 415 IIVAGGDGTLSETVTGLLRRNDEANRFPLGILPLG 519
++V GGDGT+ ++ R N ++ L ILPLG
Sbjct: 297 VLVCGGDGTVGWVLSAFDRLNLH-SKCQLAILPLG 330
>AY373340-1|AAQ76550.1| 1007|Caenorhabditis elegans BAM-2 protein.
Length = 1007
Score = 27.1 bits (57), Expect = 8.3
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = -3
Query: 318 WLTVLLKLFFCFPLVCYW 265
+LT+LL LF +VCYW
Sbjct: 872 FLTILLCLFILMCIVCYW 889
>AC024853-1|AAO21419.1| 1007|Caenorhabditis elegans Branching
abnormal protein 2 protein.
Length = 1007
Score = 27.1 bits (57), Expect = 8.3
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = -3
Query: 318 WLTVLLKLFFCFPLVCYW 265
+LT+LL LF +VCYW
Sbjct: 872 FLTILLCLFILMCIVCYW 889
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,570,441
Number of Sequences: 27780
Number of extensions: 258809
Number of successful extensions: 928
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 903
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 923
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1038911524
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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