Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0004_H23
(531 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC25H2.12c |cct7||chaperonin-containing T-complex eta subunit ... 224 6e-60
SPBC106.06 |cct4||chaperonin-containing T-complex delta subunit ... 144 5e-36
SPBC1A4.08c |cct3||chaperonin-containing T-complex gamma subunit... 134 8e-33
SPBC12D12.03 |cct1||chaperonin-containing T-complex alpha subuni... 128 5e-31
SPAC1420.02c |cct5||chaperonin-containing T-complex epsilon subu... 124 6e-30
SPAC1D4.04 |cct2||chaperonin-containing T-complex beta subunit C... 123 2e-29
SPBC337.05c |cct8||chaperonin-containing T-complex theta subunit... 104 9e-24
SPBC646.11 |cct6||chaperonin-containing T-complex zeta subunit C... 92 5e-20
SPAC12G12.04 |hsp60|hsp60|mitochondrial heat shock protein Hsp60... 50 2e-07
SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual 31 0.081
SPBC947.15c |||NADH dehydrogenase|Schizosaccharomyces pombe|chr ... 31 0.14
SPCC1742.01 ||SPCC1795.13, SPCPB16A4.07c|sequence orphan|Schizos... 27 1.7
SPCC306.11 |||sequence orphan|Schizosaccharomyces pombe|chr 3|||... 27 2.3
SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr 2|||... 26 3.0
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 26 4.0
SPAC19A8.05c |vps27|sst4|sorting receptor for ubiquitinated memb... 25 5.3
SPBC3B9.11c |ctf1||mRNA cleavage and polyadenylation specificity... 25 5.3
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 25 5.3
SPCC777.09c |arg1||acetylornithine aminotransferase|Schizosaccha... 25 5.3
SPBC23E6.04c |utp10||U3 snoRNP-associated protein Utp10 |Schizos... 25 5.3
SPCC1795.08c |||histone acetyltransferase complex subunit |Schiz... 25 5.3
SPBC30B4.01c |wsc1|SPBC3D6.14c|transmembrane receptor Wsc1 |Schi... 25 7.0
SPCC1259.07 |||transcriptional regulatory protein Rxt3 |Schizosa... 25 7.0
SPBC29A10.11c |vps902|vps9b|guanyl-nucleotide exchange factor Vp... 25 7.0
SPAC17G8.14c |pck1|SPAC22H10.01c|protein kinase C |Schizosacchar... 25 9.3
>SPBC25H2.12c |cct7||chaperonin-containing T-complex eta subunit
Cct7|Schizosaccharomyces pombe|chr 2|||Manual
Length = 558
Score = 224 bits (548), Expect = 6e-60
Identities = 108/166 (65%), Positives = 134/166 (80%)
Frame = +2
Query: 32 QPQILLLREGTDQTQGKPQLISNINACQLVVDAVRTTLGPRGMDKLIVDHSGKAVISNDG 211
Q +++L+EGTD +QG+ QL+SNINAC V D +RTTLGP G DKL+VD G+ VISNDG
Sbjct: 7 QIPVIVLKEGTDDSQGRGQLLSNINACVAVQDTIRTTLGPLGADKLMVDDRGEVVISNDG 66
Query: 212 ATIMKLLDIVHPAAKTLVDIAKSQDAEVGDGTTSVVILAGELLKRLRPFVEEGVHPRVIV 391
ATIMKLLDIVHPAAKTLVDIA++QDAEVGDGTTSVV+ AGELL+ R FVE+GV +I+
Sbjct: 67 ATIMKLLDIVHPAAKTLVDIARAQDAEVGDGTTSVVVFAGELLREARTFVEDGVSSHLII 126
Query: 392 RAVRTAAKLAVDKVKELAVKIDKKSPEEQRELLRKCAETAMSSKLI 529
R R AA+LAV+K+KE+A+ +D + R+LL KCA TAM+SKLI
Sbjct: 127 RGYRKAAQLAVNKIKEIAIHLDLSDEGKLRDLLTKCASTAMNSKLI 172
>SPBC106.06 |cct4||chaperonin-containing T-complex delta subunit
Cct4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 527
Score = 144 bits (350), Expect = 5e-36
Identities = 74/156 (47%), Positives = 107/156 (68%), Gaps = 2/156 (1%)
Frame = +2
Query: 68 QTQGKPQLI--SNINACQLVVDAVRTTLGPRGMDKLIVDHSGKAVISNDGATIMKLLDIV 241
Q + KPQ + SNI A + V DA+RT+LGP+GMDK+I G+ +++NDGATI+K L ++
Sbjct: 12 QDREKPQEVRLSNIMAARSVADAIRTSLGPKGMDKMIQTGKGEVILTNDGATILKHLSVL 71
Query: 242 HPAAKTLVDIAKSQDAEVGDGTTSVVILAGELLKRLRPFVEEGVHPRVIVRAVRTAAKLA 421
HPAAK LVD++ +QD E GDGTTSVVILAG +L +++G+HP VI + + AA
Sbjct: 72 HPAAKMLVDLSAAQDVEAGDGTTSVVILAGSMLACAEKLLKKGIHPTVIAESFQRAAGFT 131
Query: 422 VDKVKELAVKIDKKSPEEQRELLRKCAETAMSSKLI 529
VD +KE A+ I+ RE L + A T+++SK++
Sbjct: 132 VDCMKENALAIEL----SDRESLLRAATTSLNSKIV 163
>SPBC1A4.08c |cct3||chaperonin-containing T-complex gamma subunit
Cct3|Schizosaccharomyces pombe|chr 2|||Manual
Length = 528
Score = 134 bits (324), Expect = 8e-33
Identities = 59/165 (35%), Positives = 105/165 (63%)
Frame = +2
Query: 29 MQPQILLLREGTDQTQGKPQLISNINACQLVVDAVRTTLGPRGMDKLIVDHSGKAVISND 208
MQ + ++ ++ G +SNI A + V D +RT LGPR M K+++D G +++ND
Sbjct: 1 MQSPVFVMNTNGNRQVGHKAQMSNIQAAKAVADVIRTCLGPRAMLKMLLDPVGSVLLTND 60
Query: 209 GATIMKLLDIVHPAAKTLVDIAKSQDAEVGDGTTSVVILAGELLKRLRPFVEEGVHPRVI 388
G I++ +++ HPAAK+++++A++QD EVGDGTTSV+ILAGE+L P ++ +HP V+
Sbjct: 61 GHAILREIEVAHPAAKSMIELARTQDEEVGDGTTSVIILAGEILAAASPLLDRKIHPVVM 120
Query: 389 VRAVRTAAKLAVDKVKELAVKIDKKSPEEQRELLRKCAETAMSSK 523
+R+ + A + A+ + E+ + ++ E L+R C T + ++
Sbjct: 121 IRSFKQALEDALSIIDEITLPVNVDDNAEMFRLIRTCIGTKLVAR 165
>SPBC12D12.03 |cct1||chaperonin-containing T-complex alpha subunit
Cct1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 556
Score = 128 bits (309), Expect = 5e-31
Identities = 66/156 (42%), Positives = 99/156 (63%), Gaps = 1/156 (0%)
Frame = +2
Query: 65 DQTQGKPQLISNINACQLVVDAVRTTLGPRGMDKLIVDHSGKAVISNDGATIMKLLDIVH 244
++ G+ N+ A + + V+++LGP G+DK++VD G ++NDGATI+ LLD+ H
Sbjct: 15 EKISGEDVRNQNVLATTAIANVVKSSLGPVGLDKMLVDDIGDVTVTNDGATILSLLDVEH 74
Query: 245 PAAKTLVDIAKSQDAEVGDGTTSVVILAGELLKRLRPFVEEGVHPRVIVRAVRTAAKLAV 424
PA K LV++A+ QD EVGDGTTSVVI+A ELL+R V+ +HP I+ R A + AV
Sbjct: 75 PAGKVLVELAQQQDKEVGDGTTSVVIIAAELLRRANELVKNKIHPTTIITGYRLAIREAV 134
Query: 425 DKVKE-LAVKIDKKSPEEQRELLRKCAETAMSSKLI 529
+ + L+ +D +E L A+T+MSSK+I
Sbjct: 135 KFMTDVLSCSVDSLG----KESLINVAKTSMSSKII 166
>SPAC1420.02c |cct5||chaperonin-containing T-complex epsilon subunit
Cct5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 546
Score = 124 bits (300), Expect = 6e-30
Identities = 66/173 (38%), Positives = 109/173 (63%), Gaps = 1/173 (0%)
Frame = +2
Query: 14 IRNIKMQPQILLL-REGTDQTQGKPQLISNINACQLVVDAVRTTLGPRGMDKLIVDHSGK 190
+R+ + P IL+ +E + G + S+I A + V + VRT+LGPRG+DK+++ G+
Sbjct: 10 VRDDQGNPFILVRDQEKKRRLHGIDAVKSHILATKTVANIVRTSLGPRGLDKILISPDGE 69
Query: 191 AVISNDGATIMKLLDIVHPAAKTLVDIAKSQDAEVGDGTTSVVILAGELLKRLRPFVEEG 370
++NDGATI+ +++ H AK LV ++KSQD E+GDGTT VV+LAG LL++ +++G
Sbjct: 70 ITVTNDGATILDQMEVEHQIAKLLVQLSKSQDDEIGDGTTGVVVLAGALLEQAEALIDKG 129
Query: 371 VHPRVIVRAVRTAAKLAVDKVKELAVKIDKKSPEEQRELLRKCAETAMSSKLI 529
+HP I A ++AV + ++ +D SPE L R A+T++ SK++
Sbjct: 130 IHPIRIADGYEKACQVAVKHLDAISDVVD-FSPENTTNLFRS-AKTSLGSKVV 180
>SPAC1D4.04 |cct2||chaperonin-containing T-complex beta subunit
Cct2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 527
Score = 123 bits (296), Expect = 2e-29
Identities = 69/163 (42%), Positives = 101/163 (61%), Gaps = 2/163 (1%)
Frame = +2
Query: 47 LLREGTDQTQGKPQLISNINACQLVVDAVRTTLGPRGMDKLIVDHS-GKAVISNDGATIM 223
+ E Q +G+ +S+ V D V++TLGP+GMDK++ +S G V++NDGATI+
Sbjct: 8 IFNESGIQERGENARLSSFVGAIAVGDLVKSTLGPKGMDKILQSNSSGDIVVTNDGATIL 67
Query: 224 KLLDIVHPAAKTLVDIAKSQDAEVGDGTTSVVILAGELLKRLRPFVEEGVHPRVIVRAVR 403
K + + + AAK LV+I+K QD EVGDGTTSV + A ELL++ V +HP+VI+ R
Sbjct: 68 KSIALDNAAAKVLVNISKVQDDEVGDGTTSVCVFAAELLRQAEIMVNAKIHPQVIIDGYR 127
Query: 404 TAAKLAVDKVKELAVKIDKKS-PEEQRELLRKCAETAMSSKLI 529
A K A+D ++ A ID S P + R L A T +SSK++
Sbjct: 128 IATKTAIDALR--ASSIDNSSDPAKFRSDLENIARTTLSSKIL 168
>SPBC337.05c |cct8||chaperonin-containing T-complex theta subunit
Cct8 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 546
Score = 104 bits (249), Expect = 9e-24
Identities = 56/160 (35%), Positives = 90/160 (56%), Gaps = 1/160 (0%)
Frame = +2
Query: 47 LLREGTDQTQG-KPQLISNINACQLVVDAVRTTLGPRGMDKLIVDHSGKAVISNDGATIM 223
L REG QG + +I N NA + + + RT+LGP G +K++V+H + ++ND ATI+
Sbjct: 13 LFREGYRIMQGVEDAVIRNCNAIRELSEITRTSLGPNGKNKIVVNHLQQTFLTNDAATII 72
Query: 224 KLLDIVHPAAKTLVDIAKSQDAEVGDGTTSVVILAGELLKRLRPFVEEGVHPRVIVRAVR 403
+ L+++HPAAK +VD + Q+ E+GD VV+ GELL + + G+ P I +
Sbjct: 73 RELEVIHPAAKLVVDATQQQENELGDAANFVVVFTGELLAKAENMIRMGLTPLEIAKGYE 132
Query: 404 TAAKLAVDKVKELAVKIDKKSPEEQRELLRKCAETAMSSK 523
A ++ ++E+ DK E + L K T +SSK
Sbjct: 133 MALSHTMEVLEEICA--DKIETVESEKELIKAIRTCISSK 170
>SPBC646.11 |cct6||chaperonin-containing T-complex zeta subunit
Cct6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 535
Score = 91.9 bits (218), Expect = 5e-20
Identities = 53/160 (33%), Positives = 84/160 (52%)
Frame = +2
Query: 47 LLREGTDQTQGKPQLISNINACQLVVDAVRTTLGPRGMDKLIVDHSGKAVISNDGATIMK 226
LL + Q L NI+A + D +++ LGP G K++VD +G ++ DG ++
Sbjct: 4 LLNPKAESIQRAQALQVNISAAIGLQDVLKSNLGPTGTTKMLVDGAGAIKLTKDGKVLLT 63
Query: 227 LLDIVHPAAKTLVDIAKSQDAEVGDGTTSVVILAGELLKRLRPFVEEGVHPRVIVRAVRT 406
+ I +P A + A +QD GDGTTSV +L GELLK+ ++ EG+HP +I
Sbjct: 64 EMQIQNPTASCIAKAATAQDDATGDGTTSVCLLVGELLKQAELYIREGLHPSLISDGFNL 123
Query: 407 AAKLAVDKVKELAVKIDKKSPEEQRELLRKCAETAMSSKL 526
A A+ + K E RE+L A+T++S+K+
Sbjct: 124 AKNEALTFLDSF-----KTDFEVDREVLLNVAKTSLSTKI 158
>SPAC12G12.04 |hsp60|hsp60|mitochondrial heat shock protein
Hsp60|Schizosaccharomyces pombe|chr 1|||Manual
Length = 582
Score = 50.0 bits (114), Expect = 2e-07
Identities = 38/122 (31%), Positives = 58/122 (47%), Gaps = 6/122 (4%)
Frame = +2
Query: 128 AVRTTLGPRGMDKLIVDHSGKAVISNDGATIMKLLDI----VHPAAKTLVDIAKSQDAEV 295
AV TLGP+G + LI G I+ DG T+ + + + + A+ + D+A +
Sbjct: 57 AVSVTLGPKGRNVLIDQPFGSPKITKDGVTVARSVSLKDKFENLGARLVQDVASKTNEVA 116
Query: 296 GDGTTSVVILAGELLKRLRPFVEEGVHPRVIVRAVRTAAKLAVDKVKEL--AVKIDKKSP 469
GDGTT+ +L + V G +P + R + +LAVD V E A K D +
Sbjct: 117 GDGTTTATVLTRAIFSETVRNVAAGCNPMDLRRGI----QLAVDNVVEFLQANKRDITTS 172
Query: 470 EE 475
EE
Sbjct: 173 EE 174
>SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1236
Score = 31.5 bits (68), Expect = 0.081
Identities = 32/124 (25%), Positives = 57/124 (45%), Gaps = 9/124 (7%)
Frame = -1
Query: 432 TLSTANLAAVRTARTITLGW-----TPSSTNGLNLFRSSPAKITTDVVPSPTSAS*DLAM 268
TLST++ + T+ G T SST ++ S + + PTS+S D +
Sbjct: 496 TLSTSSEVVSEVSSTLLSGSSAIPSTSSSTPSSSIISSPMTSVLSSSSSIPTSSSSDFSS 555
Query: 267 STKVFAAG---CTISNSFMMVAPSF-EITALPL*STISLSMPLGPSVVRTASTTSWQALM 100
S ++G +I ++F V+ T+ P +++S+S S +AST+S ++
Sbjct: 556 SITTISSGISSSSIPSTFSSVSSILSSSTSSPSSTSLSISSSSTSSTFSSASTSSPSSIS 615
Query: 99 LDIS 88
IS
Sbjct: 616 SSIS 619
Score = 29.9 bits (64), Expect = 0.25
Identities = 27/121 (22%), Positives = 61/121 (50%), Gaps = 3/121 (2%)
Frame = -1
Query: 474 SSGDFLSIFTANSLTLSTANLAAVRTARTITLGWTPSSTNGLNLFRSSPAKITT---DVV 304
SS DF S T S +S++++ + ++ + L + SS + +L SS + +T
Sbjct: 549 SSSDFSSSITTISSGISSSSIPSTFSSVSSILSSSTSSPSSTSLSISSSSTSSTFSSAST 608
Query: 303 PSPTSAS*DLAMSTKVFAAGCTISNSFMMVAPSFEITALPL*STISLSMPLGPSVVRTAS 124
SP+S S ++ S+ + ++ ++S M+ + S + + S+ ++P+ S+ +S
Sbjct: 609 SSPSSISSSISSSSTILSSPTPSTSSLMISSSSIISGSSSILSSSISTIPISSSLSTYSS 668
Query: 123 T 121
+
Sbjct: 669 S 669
>SPBC947.15c |||NADH dehydrogenase|Schizosaccharomyces pombe|chr
2|||Manual
Length = 551
Score = 30.7 bits (66), Expect = 0.14
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = -2
Query: 410 QRYGRLER*L*DGPLLQQTASISSEVHQLRLQPM*YHHR 294
+R LE+ L + Q A + +V QL+L+P YHH+
Sbjct: 444 ERIQALEKQLGEKEAPSQVAGLKQQVEQLKLEPFKYHHQ 482
>SPCC1742.01 ||SPCC1795.13, SPCPB16A4.07c|sequence
orphan|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1563
Score = 27.1 bits (57), Expect = 1.7
Identities = 11/39 (28%), Positives = 22/39 (56%)
Frame = -1
Query: 399 TARTITLGWTPSSTNGLNLFRSSPAKITTDVVPSPTSAS 283
T T+T G+T + T+ + + + TT V+ +PT+ +
Sbjct: 797 TVTTVTTGYTGTETSTVTVIPTGTTGTTTVVIQTPTTVT 835
>SPCC306.11 |||sequence orphan|Schizosaccharomyces pombe|chr
3|||Manual
Length = 283
Score = 26.6 bits (56), Expect = 2.3
Identities = 31/125 (24%), Positives = 51/125 (40%), Gaps = 1/125 (0%)
Frame = -1
Query: 504 SAHFLRSSLCSSGDFLSIFTANSLTLSTANLAAVRTARTITLGWTPSSTNGLNLFRSSPA 325
S++ L LC G +ANS AN+ V T +++ G T + + RSS
Sbjct: 117 SSYGLTRGLCQIGSSNYSTSANSSNFDNANVINVTT--SVSSGSTSTHSK-----RSSGI 169
Query: 324 KIT-TDVVPSPTSAS*DLAMSTKVFAAGCTISNSFMMVAPSFEITALPL*STISLSMPLG 148
++ T++V P + D +M C + +V F T P+ +L P G
Sbjct: 170 SLSYTNIVDQPILFTRDSSMDWSCNMTLCNTDYPY-LVNTCFNGTQYPVNCNSALRTPFG 228
Query: 147 PSVVR 133
+ R
Sbjct: 229 GATCR 233
>SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 3971
Score = 26.2 bits (55), Expect = 3.0
Identities = 28/123 (22%), Positives = 58/123 (47%), Gaps = 3/123 (2%)
Frame = -1
Query: 447 TANSLTLSTA-NLAAVRTARTITLGWTPSSTNGLNLFRSSPAKITTDVVPSPTSAS*DLA 271
++ +T STA N + T+ ++ TP T+ L S+P +T + SP S +
Sbjct: 1604 SSTPITSSTALNTSTPITSSSVLNSSTP-ITSSTVLNSSTPITSSTALNTSPPITSSTVV 1662
Query: 270 MSTKVFAAGCTISNSFMMVAPSFEITALPL*STISL--SMPLGPSVVRTASTTSWQALML 97
S+ + ++ S + + + ++ P+ S+ +L S P+ S V +ST + ++
Sbjct: 1663 NSSTPITSSTVVNTSTPITSSTVVNSSTPITSSTALNTSTPITSSSVLNSSTPITSSTVV 1722
Query: 96 DIS 88
+ S
Sbjct: 1723 NTS 1725
Score = 25.4 bits (53), Expect = 5.3
Identities = 27/93 (29%), Positives = 40/93 (43%)
Frame = -1
Query: 366 SSTNGLNLFRSSPAKITTDVVPSPTSAS*DLAMSTKVFAAGCTISNSFMMVAPSFEITAL 187
SS+ G+ SS +K+T++ VPS S TK A TIS+S S T
Sbjct: 3661 SSSIGVGSSFSSNSKVTSNKVPSTVSPHSSSISDTK-SPATVTISSSSGQFTHSTFSTGS 3719
Query: 186 PL*STISLSMPLGPSVVRTASTTSWQALMLDIS 88
+ +T+S + S + T+ A D S
Sbjct: 3720 TMHNTVSHATSTSSSFTTSHLPTNTLASTFDNS 3752
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 25.8 bits (54), Expect = 4.0
Identities = 22/100 (22%), Positives = 38/100 (38%)
Frame = +2
Query: 62 TDQTQGKPQLISNINACQLVVDAVRTTLGPRGMDKLIVDHSGKAVISNDGATIMKLLDIV 241
T T + SN N+ LV D + P + + + N A+ + +L+
Sbjct: 218 TTSTNTSTVIPSNPNSVFLV-DCTHSQC-PTDLPNIATTQHSLRYLDNASASAITVLERT 275
Query: 242 HPAAKTLVDIAKSQDAEVGDGTTSVVILAGELLKRLRPFV 361
HPAA + + S + D + + + K PFV
Sbjct: 276 HPAASSTMATESSHQSPSADSQAEELSKSQRVAKDDDPFV 315
>SPAC19A8.05c |vps27|sst4|sorting receptor for ubiquitinated
membrane proteins, ESCRT 0 complex|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 610
Score = 25.4 bits (53), Expect = 5.3
Identities = 15/36 (41%), Positives = 18/36 (50%)
Frame = -1
Query: 456 SIFTANSLTLSTANLAAVRTARTITLGWTPSSTNGL 349
SIFT L N+ +RT +LG T S NGL
Sbjct: 394 SIFTEYQLQELHENMGVMRTRMMRSLGETMSKYNGL 429
>SPBC3B9.11c |ctf1||mRNA cleavage and polyadenylation specificity
factor complex subunit Ctf1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 363
Score = 25.4 bits (53), Expect = 5.3
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = -1
Query: 162 SMPLGPSVVRTASTTSWQALM 100
S+PL PSVV+ ST S Q L+
Sbjct: 211 SIPLAPSVVQVLSTFSAQELL 231
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 25.4 bits (53), Expect = 5.3
Identities = 30/144 (20%), Positives = 65/144 (45%), Gaps = 3/144 (2%)
Frame = -1
Query: 528 ISFEDIAVSAHFLRSSLCSSGDFLSIFTANSLTLSTANLAAVRTARTITLGWTPSSTNGL 349
I + V++ L ++ C++ + +T+ +T S +++ + + T +T+
Sbjct: 479 IPYTSTPVTSTPLTTTNCTTSTSVP-YTSTPVTSSNYTISSSTPVTSTPVTTTNCTTSTS 537
Query: 348 NLFRSSPAKITTDVVPSPTSAS*DLAMSTKVFAAGCTISNSFMMVA-PSFEITALPL*ST 172
L+ S+P T + T+++ ST V ++ TIS+S + + P S
Sbjct: 538 VLYTSTPVTSTPLATTNCTTSTSVPYTSTPVTSSNYTISSSTPVTSTPVTTTNCTTSTSV 597
Query: 171 ISLSMPL-GPSVVRTAST-TSWQA 106
+ S P+ P+ ++ST SW +
Sbjct: 598 LYTSTPITSPNSTSSSSTQVSWNS 621
>SPCC777.09c |arg1||acetylornithine
aminotransferase|Schizosaccharomyces pombe|chr
3|||Manual
Length = 441
Score = 25.4 bits (53), Expect = 5.3
Identities = 12/36 (33%), Positives = 21/36 (58%)
Frame = -1
Query: 348 NLFRSSPAKITTDVVPSPTSAS*DLAMSTKVFAAGC 241
NLF + PA ++V+ + + + +A TK+F A C
Sbjct: 109 NLFYNEPAIELSNVINNSLAKNSGIAGPTKIFFANC 144
>SPBC23E6.04c |utp10||U3 snoRNP-associated protein Utp10
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1649
Score = 25.4 bits (53), Expect = 5.3
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = -1
Query: 204 FEITALPL*STISLSMPLGPSVV 136
F+I L S+I+ S+PL PS++
Sbjct: 252 FQIAGFMLLSSIAASLPLSPSII 274
>SPCC1795.08c |||histone acetyltransferase complex subunit
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 985
Score = 25.4 bits (53), Expect = 5.3
Identities = 10/28 (35%), Positives = 17/28 (60%)
Frame = -3
Query: 163 VHAPWAKCCADSINNQLAGIDVRYKLRL 80
VH+P AK + + N +GID+ ++L
Sbjct: 287 VHSPEAKVTENDVENVQSGIDIEKTIQL 314
>SPBC30B4.01c |wsc1|SPBC3D6.14c|transmembrane receptor Wsc1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 374
Score = 25.0 bits (52), Expect = 7.0
Identities = 34/136 (25%), Positives = 61/136 (44%), Gaps = 5/136 (3%)
Frame = -1
Query: 507 VSAHFLRSSLCSSG--DFLSIFTANSLTLS---TANLAAVRTARTITLGWTPSSTNGLNL 343
++A + SSLC++ + S+ L S T N T + ++ T SS++
Sbjct: 85 LTATEVSSSLCTTPCPGYGSLMCGGDLYWSVYLTGNGVLQTTVSSSSVSSTTSSSSS--- 141
Query: 342 FRSSPAKITTDVVPSPTSAS*DLAMSTKVFAAGCTISNSFMMVAPSFEITALPL*STISL 163
SSP+ +T SP+S+S + S+ ++ + S+S + S ++ S+ S
Sbjct: 142 --SSPSSSSTTTTTSPSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 199
Query: 162 SMPLGPSVVRTASTTS 115
S S V S+TS
Sbjct: 200 SSSSSSSSVPITSSTS 215
>SPCC1259.07 |||transcriptional regulatory protein Rxt3
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 351
Score = 25.0 bits (52), Expect = 7.0
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = -3
Query: 394 SNDNSRMDPFFNKRPQSLQKFTS*DY 317
S DNS ++PF N+ P S F +Y
Sbjct: 176 SIDNSALEPFLNRYPASESLFPVTEY 201
>SPBC29A10.11c |vps902|vps9b|guanyl-nucleotide exchange factor
Vps902 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 402
Score = 25.0 bits (52), Expect = 7.0
Identities = 13/25 (52%), Positives = 18/25 (72%)
Frame = -1
Query: 489 RSSLCSSGDFLSIFTANSLTLSTAN 415
+SS+ S D LS+ ANS T+ST+N
Sbjct: 279 QSSIQPSDDPLSLEVANSETVSTSN 303
>SPAC17G8.14c |pck1|SPAC22H10.01c|protein kinase C
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 988
Score = 24.6 bits (51), Expect = 9.3
Identities = 21/69 (30%), Positives = 26/69 (37%)
Frame = -1
Query: 489 RSSLCSSGDFLSIFTANSLTLSTANLAAVRTARTITLGWTPSSTNGLNLFRSSPAKITTD 310
R L S F ++ T S L A T L TP LN+ SS
Sbjct: 569 RKPLSSQNTFDTLPTI-SQGLLAATQPVTSVLNTSPLPKTPEKDRSLNVTPSSSTPTPAS 627
Query: 309 VVPSPTSAS 283
V+ P+SAS
Sbjct: 628 VLAPPSSAS 636
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,132,916
Number of Sequences: 5004
Number of extensions: 41548
Number of successful extensions: 149
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 140
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 147
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 218398248
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -